RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 TAF4O00268 1085 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 UBFD1O14562 309 aaKnown RBP4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 SCAMP1O15126 338 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 SLC22A2O15244 555 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 DCXO43602 365 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 KIF1CO43896 1103 aaKnown RBP4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 OR1I1O60431 355 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 KERAO60938 352 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 NIPSNAP2O75323 286 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 ECI2O75521 394 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 SLC25A12O75746 678 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 TM7SF2O76062 418 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 RHOBTB1O94844 696 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 SORBS2O94875 1100 aaKnown RBP4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 NKX2-2O95096 273 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 PLAUP00749 431 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 RPS17P08708 135 aaKnown RBP4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 CHRM5P08912 532 aaPredicted RBP4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 ALPIP09923 528 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 HSPA8P11142 646 aaKnown RBP4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 PCNAP12004 261 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 COX4I1P13073 169 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 IL7RP16871 459 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 CTPS1P17812 591 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 NCF2P19878 526 aaPredicted RBP4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 CD70P32970 193 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 CA8P35219 290 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 STK19P49842 368 aaPredicted RBP4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 CAMPP49913 170 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 CLDN2P57739 230 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 C1QTNF8P60827 252 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 SIM1P81133 766 aaPredicted RBP4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 ASPHQ12797 758 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 ILF2Q12905 390 aaKnown RBP4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 FOXE3Q13461 319 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 CUL3Q13618 768 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 HERC3Q15034 1050 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 TSNQ15631 228 aaKnown RBP4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 CDKN3Q16667 212 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 TRMT5Q32P41 509 aaKnown RBP4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 CFAP157Q5JU67 520 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 ZNF678Q5SXM1 525 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 FNDC7Q5VTL7 733 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 PLPP4Q5VZY2 271 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 KLC3Q6P597 504 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 C22orf39Q6P5X5 142 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 GLDNQ6ZMI3 551 aaPredicted RBP4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 UBE2Q1Q7Z7E8 422 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 TBC1D26Q86UD7 250 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 SNX32Q86XE0 403 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 LURAP1LQ8IV03 231 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 VRK3Q8IV63 474 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 PELI3Q8N2H9 469 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 TMEM199Q8N511 208 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 MAB21L3Q8N8X9 362 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 IL17RCQ8NAC3 791 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 AVL9Q8NBF6 648 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 CD200R1Q8TD46 325 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 PIH1D2Q8WWB5 315 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 MRPS31Q92665 395 aaKnown RBP4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 KAT2AQ92830 837 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 ATOH1Q92858 354 aaPredicted RBP4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 MCUR1Q96AQ8 359 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 RMDN1Q96DB5 314 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 PHF21BQ96EK2 531 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 TMA16Q96EY4 203 aaKnown RBP4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 ZNF503Q96F45 646 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 ELMOD3Q96FG2 381 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 ZC3HAV1LQ96H79 300 aaKnown RBP4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 ZNF570Q96NI8 536 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 CATSPER2Q96P56 530 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 PANX3Q96QZ0 392 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 GPR21Q99679 349 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 DERL2Q9GZP9 239 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 P2RY12Q9H244 342 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 C1orf21Q9H246 121 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 TFB2MQ9H5Q4 396 aaKnown RBP4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 MEAF6Q9HAF1 191 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 BPIFA1Q9NP55 256 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 GTSE1Q9NYZ3 720 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 IL17CQ9P0M4 197 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 LSM7Q9UK45 103 aaKnown RBP4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 CCL26Q9Y258 94 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 C15orf41Q9Y2V0 281 aa4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 PTRH2Q9Y3E5 179 aaKnown RBP4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.61□□□□□ -1.67
CTNNA1-212ENST00000518919 ANKRD36A6QL64 1941 aa4.6□□□□□ -1.67
CTNNA1-212ENST00000518919 TRBV5-4A0A0C4DH59 114 aa4.6□□□□□ -1.67
CTNNA1-212ENST00000518919 A0A0J9YYE9 177 aa4.6□□□□□ -1.67
CTNNA1-212ENST00000518919 TYW5A2RUC4 315 aaKnown RBP4.6□□□□□ -1.67
CTNNA1-212ENST00000518919 FAM90A8PA6NJQ4 464 aa4.6□□□□□ -1.67
CTNNA1-212ENST00000518919 C2orf81A6NN90 581 aa4.6□□□□□ -1.67
CTNNA1-212ENST00000518919 SUPT3HB4E1H0 165 aa4.6□□□□□ -1.67
CTNNA1-212ENST00000518919 ANKRD66B4E2M5 251 aa4.6□□□□□ -1.67
CTNNA1-212ENST00000518919 FAM157AC9JC47 383 aa4.6□□□□□ -1.67
CTNNA1-212ENST00000518919 CDC7O00311 574 aa4.6□□□□□ -1.67
CTNNA1-212ENST00000518919 PPP6CO00743 305 aa4.6□□□□□ -1.67
CTNNA1-212ENST00000518919 MGST3O14880 152 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms