RNA–Protein interactions for RNA: ENST00000518825.5

CTNNA1-210, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-210ENST00000518825 GJA8P48165 433 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 C9orf64Q5T6V5 341 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 ATAD3BQ5T9A4 648 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 DEPDC1Q5TB30 811 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 REEP3Q6NUK4 255 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 ERAP2Q6P179 960 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 UNC5DQ6UXZ4 953 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 PTCHD4Q6ZW05 846 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 ZNF367Q7RTV3 350 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 UBE3DQ7Z6J8 389 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 HEATR4Q86WZ0 1026 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 AMER2Q8N7J2 671 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 TP53I13Q8NBR0 393 aaPredicted RBP8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 HCAR2Q8TDS4 363 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 ING5Q8WYH8 240 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 FGF11Q92914 225 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 TRIM43Q96BQ3 446 aaPredicted RBP8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 MTERF3Q96E29 417 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 TXNDC15Q96J42 360 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 LINC00615Q96LM1 132 aaPredicted RBP8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 GPA33Q99795 319 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 KCNS3Q9BQ31 491 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 CCDC177Q9NQR7 707 aaPredicted RBP8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 TMEM39AQ9NV64 488 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 C14orf119Q9NWQ9 140 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 CNOT2Q9NZN8 540 aaKnown RBP8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 TSC22D4Q9Y3Q8 395 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 H3BQ06 376 aaPredicted RBP8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 ZNF197O14709 1029 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 TMPRSS11DO60235 418 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 IFNW1P05000 195 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 CYP17A1P05093 508 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 ADH1AP07327 375 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 DDCP20711 480 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 XPAP23025 273 aaPredicted RBP8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 FRKP42685 505 aaPredicted RBP8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 CRYBB2P43320 205 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 TMED10P49755 219 aaKnown RBP8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 NKX2-5P52952 324 aaPredicted RBP8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 ZNF45Q02386 682 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 CNTN1Q12860 1018 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 DHCR24Q15392 516 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 UAP1L1Q3KQV9 507 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 ZMAT1Q5H9K5 638 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 HMGN2P46Q86SG4 172 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 OR2L2Q8NH16 312 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 SLC7A13Q8TCU3 470 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 CRELD1Q96HD1 420 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 MAPKAP1Q9BPZ7 522 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 KLHL25Q9H0H3 589 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 RNF208Q9H0X6 261 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 ZNF556Q9HAH1 456 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 A4GALTQ9NPC4 353 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 ZDHHC4Q9NPG8 344 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 ERVK13-1Q9NX77 482 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 DNAJC27Q9NZQ0 273 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 TBC1D24Q9ULP9 559 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 SH3D21A4FU49 640 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 PSMD11O00231 422 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 LRRTM2O43300 516 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 COQ9O75208 318 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 CSO75390 466 aaKnown RBP8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 PTGER1P34995 402 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 RCVRNP35243 200 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 HOXD12P35452 270 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 PPM1AP35813 382 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 SLC6A11P48066 632 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 CDC42P60953 191 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 BCL2A1Q16548 175 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 TOR1AIP1Q5JTV8 583 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 PRAMEF14Q5SWL7 426 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 PRAMEF13Q5VWM6 474 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 C12orf73Q69YU5 71 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 RAET1GQ6H3X3 334 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 IKBIPQ70UQ0 350 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 SLC44A2Q8IWA5 706 aaPredicted RBP8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 WDR36Q8NI36 951 aaKnown RBP8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 NUS1Q96E22 293 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 LRIG1Q96JA1 1093 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 LGR4Q9BXB1 951 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 SIAEQ9HAT2 523 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 TEX10Q9NXF1 929 aaPredicted RBP8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 WDR37Q9Y2I8 494 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 RBMX2Q9Y388 322 aaKnown RBP8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 CKAP5Q14008 2032 aa8.03□□□□□ -1.12
CTNNA1-210ENST00000518825 DOCK9Q9BZ29 2069 aa8.02□□□□□ -1.13
CTNNA1-210ENST00000518825 A0A1W2PPV9 198 aa8.02□□□□□ -1.13
CTNNA1-210ENST00000518825 CCRL2O00421 344 aa8.02□□□□□ -1.13
CTNNA1-210ENST00000518825 SCG5P05408 212 aa8.02□□□□□ -1.13
CTNNA1-210ENST00000518825 ERGP11308 486 aa8.02□□□□□ -1.13
CTNNA1-210ENST00000518825 CCL5P13501 91 aa8.02□□□□□ -1.13
CTNNA1-210ENST00000518825 BMPR1AP36894 532 aa8.02□□□□□ -1.13
CTNNA1-210ENST00000518825 MAPK9P45984 424 aa8.02□□□□□ -1.13
CTNNA1-210ENST00000518825 HSPB3Q12988 150 aa8.02□□□□□ -1.13
CTNNA1-210ENST00000518825 ILKQ13418 452 aa8.02□□□□□ -1.13
CTNNA1-210ENST00000518825 SYPL1Q16563 259 aa8.02□□□□□ -1.13
CTNNA1-210ENST00000518825 GAB4Q2WGN9 574 aa8.02□□□□□ -1.13
CTNNA1-210ENST00000518825 KHDRBS2Q5VWX1 349 aaKnown RBP8.02□□□□□ -1.13
CTNNA1-210ENST00000518825 HIST2H2AA3Q6FI13 130 aa8.02□□□□□ -1.13
CTNNA1-210ENST00000518825 PGBD2Q6P3X8 592 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms