RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 PGRMC2O15173 223 aa11.26□□□□□ -0.61
PDLIM5-220ENST00000514830 CNOT3O75175 753 aaKnown RBP11.26□□□□□ -0.61
PDLIM5-220ENST00000514830 GPR75O95800 540 aa11.26□□□□□ -0.61
PDLIM5-220ENST00000514830 IFI6P09912 130 aa11.26□□□□□ -0.61
PDLIM5-220ENST00000514830 NCF2P19878 526 aaPredicted RBP11.26□□□□□ -0.61
PDLIM5-220ENST00000514830 GALNSP34059 522 aa11.26□□□□□ -0.61
PDLIM5-220ENST00000514830 UFM1P61960 85 aa11.26□□□□□ -0.61
PDLIM5-220ENST00000514830 LRRC74AQ0VAA2 488 aa11.26□□□□□ -0.61
PDLIM5-220ENST00000514830 RCAN2Q14206 197 aa11.26□□□□□ -0.61
PDLIM5-220ENST00000514830 MLC1Q15049 377 aa11.26□□□□□ -0.61
PDLIM5-220ENST00000514830 UGT8Q16880 541 aa11.26□□□□□ -0.61
PDLIM5-220ENST00000514830 MSANTD1Q6ZTZ1 278 aa11.26□□□□□ -0.61
PDLIM5-220ENST00000514830 CACNA2D3Q8IZS8 1091 aa11.26□□□□□ -0.61
PDLIM5-220ENST00000514830 TMEM52Q8NDY8 209 aa11.26□□□□□ -0.61
PDLIM5-220ENST00000514830 CT55Q8WUE5 264 aa11.26□□□□□ -0.61
PDLIM5-220ENST00000514830 ANKRD9Q96BM1 317 aaPredicted RBP11.26□□□□□ -0.61
PDLIM5-220ENST00000514830 BHLHE41Q9C0J9 482 aaPredicted RBP11.26□□□□□ -0.61
PDLIM5-220ENST00000514830 NMUR2Q9GZQ4 415 aa11.26□□□□□ -0.61
PDLIM5-220ENST00000514830 MIEF1Q9NQG6 463 aa11.26□□□□□ -0.61
PDLIM5-220ENST00000514830 ATAD3AQ9NVI7 634 aa11.26□□□□□ -0.61
PDLIM5-220ENST00000514830 KCND3Q9UK17 655 aa11.26□□□□□ -0.61
PDLIM5-220ENST00000514830 ACACAQ13085 2346 aa11.25□□□□□ -0.61
PDLIM5-220ENST00000514830 TCRBV16S1A1N1A0A5B0 115 aa11.25□□□□□ -0.61
PDLIM5-220ENST00000514830 FAM227AF5H4B4 570 aa11.25□□□□□ -0.61
PDLIM5-220ENST00000514830 FCHO1O14526 889 aa11.25□□□□□ -0.61
PDLIM5-220ENST00000514830 SLITRK5O94991 958 aa11.25□□□□□ -0.61
PDLIM5-220ENST00000514830 IGHEP01854 428 aa11.25□□□□□ -0.61
PDLIM5-220ENST00000514830 CAPNS1P04632 268 aa11.25□□□□□ -0.61
PDLIM5-220ENST00000514830 IL6P05231 212 aa11.25□□□□□ -0.61
PDLIM5-220ENST00000514830 TCN2P20062 427 aa11.25□□□□□ -0.61
PDLIM5-220ENST00000514830 IL12AP29459 219 aa11.25□□□□□ -0.61
PDLIM5-220ENST00000514830 HNRNPFP52597 415 aaKnown RBP11.25□□□□□ -0.61
PDLIM5-220ENST00000514830 PCBP4P57723 403 aaKnown RBP11.25□□□□□ -0.61
PDLIM5-220ENST00000514830 RPS15P62841 145 aaKnown RBP11.25□□□□□ -0.61
PDLIM5-220ENST00000514830 MC1RQ01726 317 aa11.25□□□□□ -0.61
PDLIM5-220ENST00000514830 ACTN3Q08043 901 aaPredicted RBP11.25□□□□□ -0.61
PDLIM5-220ENST00000514830 KLF10Q13118 480 aa11.25□□□□□ -0.61
PDLIM5-220ENST00000514830 DNASE1L3Q13609 305 aa11.25□□□□□ -0.61
PDLIM5-220ENST00000514830 SERTAD2Q14140 314 aa11.25□□□□□ -0.61
PDLIM5-220ENST00000514830 CRTC2Q53ET0 693 aaPredicted RBP11.25□□□□□ -0.61
PDLIM5-220ENST00000514830 VWA2Q5GFL6 755 aa11.25□□□□□ -0.61
PDLIM5-220ENST00000514830 CPTPQ5TA50 214 aa11.25□□□□□ -0.61
PDLIM5-220ENST00000514830 FAM199XQ6PEV8 388 aaPredicted RBP11.25□□□□□ -0.61
PDLIM5-220ENST00000514830 BLOC1S3Q6QNY0 202 aa11.25□□□□□ -0.61
PDLIM5-220ENST00000514830 TMEM205Q6UW68 189 aa11.25□□□□□ -0.61
PDLIM5-220ENST00000514830 MTDHQ86UE4 582 aaKnown RBP11.25□□□□□ -0.61
PDLIM5-220ENST00000514830 TICAM1Q8IUC6 712 aa11.25□□□□□ -0.61
PDLIM5-220ENST00000514830 FUNDC1Q8IVP5 155 aa11.25□□□□□ -0.61
PDLIM5-220ENST00000514830 KRTCAP2Q8N6L1 136 aa11.25□□□□□ -0.61
PDLIM5-220ENST00000514830 FAM47BQ8NA70 645 aa11.25□□□□□ -0.61
PDLIM5-220ENST00000514830 OR4K14Q8NGD5 310 aa11.25□□□□□ -0.61
PDLIM5-220ENST00000514830 CLHC1Q8NHS4 586 aa11.25□□□□□ -0.61
PDLIM5-220ENST00000514830 SNIP1Q8TAD8 396 aaKnown RBP11.25□□□□□ -0.61
PDLIM5-220ENST00000514830 PPCDCQ96CD2 204 aa11.25□□□□□ -0.61
PDLIM5-220ENST00000514830 MARK4Q96L34 752 aa11.25□□□□□ -0.61
PDLIM5-220ENST00000514830 TEX37Q96LM6 180 aa11.25□□□□□ -0.61
PDLIM5-220ENST00000514830 ZNF681Q96N22 645 aa11.25□□□□□ -0.61
PDLIM5-220ENST00000514830 LRRC37BQ96QE4 947 aa11.25□□□□□ -0.61
PDLIM5-220ENST00000514830 ZBTB18Q99592 522 aa11.25□□□□□ -0.61
PDLIM5-220ENST00000514830 PELOQ9BRX2 385 aaKnown RBP11.25□□□□□ -0.61
PDLIM5-220ENST00000514830 EFHD1Q9BUP0 239 aa11.25□□□□□ -0.61
PDLIM5-220ENST00000514830 CCDC106Q9BWC9 280 aa11.25□□□□□ -0.61
PDLIM5-220ENST00000514830 TMEM121BQ9BXQ6 578 aaPredicted RBP11.25□□□□□ -0.61
PDLIM5-220ENST00000514830 VN1R1Q9GZP7 353 aa11.25□□□□□ -0.61
PDLIM5-220ENST00000514830 CCDC86Q9H6F5 360 aaKnown RBP11.25□□□□□ -0.61
PDLIM5-220ENST00000514830 SLC52A3Q9NQ40 469 aa11.25□□□□□ -0.61
PDLIM5-220ENST00000514830 SLC35C2Q9NQQ7 365 aa11.25□□□□□ -0.61
PDLIM5-220ENST00000514830 PRTFDC1Q9NRG1 225 aa11.25□□□□□ -0.61
PDLIM5-220ENST00000514830 SEMA3GQ9NS98 782 aa11.25□□□□□ -0.61
PDLIM5-220ENST00000514830 ACSS1Q9NUB1 689 aaPredicted RBP11.25□□□□□ -0.61
PDLIM5-220ENST00000514830 TCFL5Q9UL49 500 aa11.25□□□□□ -0.61
PDLIM5-220ENST00000514830 FARSAQ9Y285 508 aaKnown RBP11.25□□□□□ -0.61
PDLIM5-220ENST00000514830 SSUH2Q9Y2M2 353 aa11.25□□□□□ -0.61
PDLIM5-220ENST00000514830 ZFHX4Q86UP3 3567 aa11.25□□□□□ -0.61
PDLIM5-220ENST00000514830 LOC102723996A0A087X1L8 192 aa11.24□□□□□ -0.61
PDLIM5-220ENST00000514830 CAPN14A8MX76 684 aa11.24□□□□□ -0.61
PDLIM5-220ENST00000514830 MYO1GB0I1T2 1018 aa11.24□□□□□ -0.61
PDLIM5-220ENST00000514830 IDSB3KWA1 339 aa11.24□□□□□ -0.61
PDLIM5-220ENST00000514830 RNASET2O00584 256 aaKnown RBP11.24□□□□□ -0.61
PDLIM5-220ENST00000514830 AKAP10O43572 662 aa11.24□□□□□ -0.61
PDLIM5-220ENST00000514830 FGF17O60258 216 aa11.24□□□□□ -0.61
PDLIM5-220ENST00000514830 SCN2BO60939 215 aa11.24□□□□□ -0.61
PDLIM5-220ENST00000514830 ATP1B1P05026 303 aa11.24□□□□□ -0.61
PDLIM5-220ENST00000514830 SLC35E2P0CK97 266 aa11.24□□□□□ -0.61
PDLIM5-220ENST00000514830 COX7A2P14406 83 aa11.24□□□□□ -0.61
PDLIM5-220ENST00000514830 CSNK2A2P19784 350 aaPredicted RBP11.24□□□□□ -0.61
PDLIM5-220ENST00000514830 PIK3R1P27986 724 aa11.24□□□□□ -0.61
PDLIM5-220ENST00000514830 PTPN4P29074 926 aa11.24□□□□□ -0.61
PDLIM5-220ENST00000514830 KIR3DL1P43629 444 aa11.24□□□□□ -0.61
PDLIM5-220ENST00000514830 POLR2JP52435 117 aaKnown RBP11.24□□□□□ -0.61
PDLIM5-220ENST00000514830 SF3A3Q12874 501 aaKnown RBP eCLIP11.24□□□□□ -0.61
PDLIM5-220ENST00000514830 TERF2Q15554 542 aa11.24□□□□□ -0.61
PDLIM5-220ENST00000514830 ZNF385BQ569K4 471 aa11.24□□□□□ -0.61
PDLIM5-220ENST00000514830 COQ5Q5HYK3 327 aa11.24□□□□□ -0.61
PDLIM5-220ENST00000514830 MLIPQ5VWP3 458 aa11.24□□□□□ -0.61
PDLIM5-220ENST00000514830 PAOXQ6QHF9 649 aa11.24□□□□□ -0.61
PDLIM5-220ENST00000514830 PROSER1Q86XN7 944 aa11.24□□□□□ -0.61
PDLIM5-220ENST00000514830 SHISA5Q8N114 240 aa11.24□□□□□ -0.61
PDLIM5-220ENST00000514830 MMP21Q8N119 569 aa11.24□□□□□ -0.61
PDLIM5-220ENST00000514830 ENDOVQ8N8Q3 282 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms