RNA–Protein interactions for RNA: ENST00000514402.1

MATR3-223, Transcript of matrin 3, human

TSL 2

Gene MATR3, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-223	ENST00000514402	IGHD	P01880	384 aa		3	□□□□□ -1.93
MATR3-223	ENST00000514402	PTMA	P06454	111 aa	Known RBP	3	□□□□□ -1.93
MATR3-223	ENST00000514402	FH	P07954	510 aa		3	□□□□□ -1.93
MATR3-223	ENST00000514402	CCR4	P51679	360 aa		3	□□□□□ -1.93
MATR3-223	ENST00000514402	NDP	Q00604	133 aa		3	□□□□□ -1.93
MATR3-223	ENST00000514402	SCN1B	Q07699	218 aa		3	□□□□□ -1.93
MATR3-223	ENST00000514402	C17orf58	Q2M2W7	97 aa		3	□□□□□ -1.93
MATR3-223	ENST00000514402	SHQ1	Q6PI26	577 aa	Known RBP	3	□□□□□ -1.93
MATR3-223	ENST00000514402	PET117	Q6UWS5	81 aa		3	□□□□□ -1.93
MATR3-223	ENST00000514402	TMEM64	Q6YI46	380 aa		3	□□□□□ -1.93
MATR3-223	ENST00000514402	MSANTD1	Q6ZTZ1	278 aa		3	□□□□□ -1.93
MATR3-223	ENST00000514402	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	3	□□□□□ -1.93
MATR3-223	ENST00000514402	CCDC91	Q7Z6B0	441 aa		3	□□□□□ -1.93
MATR3-223	ENST00000514402	PRR22	Q8IZ63	422 aa		3	□□□□□ -1.93
MATR3-223	ENST00000514402	GVQW1	Q8N7I0	195 aa		3	□□□□□ -1.93
MATR3-223	ENST00000514402	GANC	Q8TET4	914 aa		3	□□□□□ -1.93
MATR3-223	ENST00000514402	TCP11	Q8WWU5	503 aa		3	□□□□□ -1.93
MATR3-223	ENST00000514402	PKNOX2	Q96KN3	472 aa		3	□□□□□ -1.93
MATR3-223	ENST00000514402	ZIM3	Q96PE6	472 aa		3	□□□□□ -1.93
MATR3-223	ENST00000514402	XPO4	Q9C0E2	1151 aa	Known RBP	3	□□□□□ -1.93
MATR3-223	ENST00000514402	NT5DC2	Q9H857	520 aa		3	□□□□□ -1.93
MATR3-223	ENST00000514402	RAB9B	Q9NP90	201 aa		3	□□□□□ -1.93
MATR3-223	ENST00000514402	TMCC3	Q9ULS5	477 aa		3	□□□□□ -1.93
MATR3-223	ENST00000514402	KLF2	Q9Y5W3	355 aa	Predicted RBP	3	□□□□□ -1.93
MATR3-223	ENST00000514402	ETV7	Q9Y603	341 aa		3	□□□□□ -1.93
MATR3-223	ENST00000514402	FAM205A	Q6ZU69	1335 aa		2.99	□□□□□ -1.93
MATR3-223	ENST00000514402	TRAV9-2	A0A087WT02	112 aa		2.99	□□□□□ -1.93
MATR3-223	ENST00000514402	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	2.99	□□□□□ -1.93
MATR3-223	ENST00000514402	RNF212B	A8MTL3	300 aa		2.99	□□□□□ -1.93
MATR3-223	ENST00000514402	NEDD8-MDP1	E9PL57	170 aa		2.99	□□□□□ -1.93
MATR3-223	ENST00000514402	RTL8C	O15255	209 aa		2.99	□□□□□ -1.93
MATR3-223	ENST00000514402	GOSR1	O95249	250 aa		2.99	□□□□□ -1.93
MATR3-223	ENST00000514402	LYN	P07948	512 aa		2.99	□□□□□ -1.93
MATR3-223	ENST00000514402	FOSL2	P15408	326 aa		2.99	□□□□□ -1.93
MATR3-223	ENST00000514402	IFNAR1	P17181	557 aa		2.99	□□□□□ -1.93
MATR3-223	ENST00000514402	ATP5D	P30049	168 aa		2.99	□□□□□ -1.93
MATR3-223	ENST00000514402	PRKCI	P41743	596 aa		2.99	□□□□□ -1.93
MATR3-223	ENST00000514402	ALDH3B1	P43353	468 aa		2.99	□□□□□ -1.93
MATR3-223	ENST00000514402	FKBP1B	P68106	108 aa		2.99	□□□□□ -1.93
MATR3-223	ENST00000514402	CAPRIN1	Q14444	709 aa	Known RBP	2.99	□□□□□ -1.93
MATR3-223	ENST00000514402	SMC1A	Q14683	1233 aa	Known RBP	2.99	□□□□□ -1.93
MATR3-223	ENST00000514402	LTB4R	Q15722	352 aa		2.99	□□□□□ -1.93
MATR3-223	ENST00000514402	C1orf189	Q5VU69	101 aa		2.99	□□□□□ -1.93
MATR3-223	ENST00000514402	LYPLAL1	Q5VWZ2	237 aa		2.99	□□□□□ -1.93
MATR3-223	ENST00000514402	ZNF730	Q6ZMV8	503 aa		2.99	□□□□□ -1.93
MATR3-223	ENST00000514402	C17orf64	Q86WR6	236 aa		2.99	□□□□□ -1.93
MATR3-223	ENST00000514402	KRTAP11-1	Q8IUC1	163 aa		2.99	□□□□□ -1.93
MATR3-223	ENST00000514402	CCDC170	Q8IYT3	715 aa		2.99	□□□□□ -1.93
MATR3-223	ENST00000514402	SMYD1	Q8NB12	490 aa		2.99	□□□□□ -1.93
MATR3-223	ENST00000514402	GOLGA5	Q8TBA6	731 aa		2.99	□□□□□ -1.93
MATR3-223	ENST00000514402	SAP25	Q8TEE9	199 aa		2.99	□□□□□ -1.93
MATR3-223	ENST00000514402	EXOC4	Q96A65	974 aa		2.99	□□□□□ -1.93
MATR3-223	ENST00000514402	NTNG2	Q96CW9	530 aa		2.99	□□□□□ -1.93
MATR3-223	ENST00000514402	ZBED6CL	Q96FA7	236 aa	Predicted RBP	2.99	□□□□□ -1.93
MATR3-223	ENST00000514402	PPP1R16A	Q96I34	528 aa		2.99	□□□□□ -1.93
MATR3-223	ENST00000514402	MYCBP	Q99417	103 aa	Predicted RBP	2.99	□□□□□ -1.93
MATR3-223	ENST00000514402	IDI2	Q9BXS1	227 aa		2.99	□□□□□ -1.93
MATR3-223	ENST00000514402	LRRC2	Q9BYS8	371 aa		2.99	□□□□□ -1.93
MATR3-223	ENST00000514402	DPEP3	Q9H4B8	488 aa		2.99	□□□□□ -1.93
MATR3-223	ENST00000514402	VPS18	Q9P253	973 aa		2.99	□□□□□ -1.93
MATR3-223	ENST00000514402	TMED7	Q9Y3B3	224 aa		2.99	□□□□□ -1.93
MATR3-223	ENST00000514402	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	2.99	□□□□□ -1.93
MATR3-223	ENST00000514402	KIAA1217	Q5T5P2	1943 aa		2.98	□□□□□ -1.93
MATR3-223	ENST00000514402	TRAV34	A0A0B4J273	112 aa		2.98	□□□□□ -1.93
MATR3-223	ENST00000514402	SRRM4	A7MD48	611 aa	Known RBP	2.98	□□□□□ -1.93
MATR3-223	ENST00000514402	MT-ND3	P03897	115 aa		2.98	□□□□□ -1.93
MATR3-223	ENST00000514402	GIG44	P09565	113 aa	Predicted RBP	2.98	□□□□□ -1.93
MATR3-223	ENST00000514402	OR9G9	P0C7N8	305 aa		2.98	□□□□□ -1.93
MATR3-223	ENST00000514402	TNFRSF4	P43489	277 aa		2.98	□□□□□ -1.93
MATR3-223	ENST00000514402	RGR	P47804	291 aa		2.98	□□□□□ -1.93
MATR3-223	ENST00000514402	ADAR	P55265	1226 aa	Known RBP	2.98	□□□□□ -1.93
MATR3-223	ENST00000514402	GSTO1	P78417	241 aa		2.98	□□□□□ -1.93
MATR3-223	ENST00000514402	RBP5	P82980	135 aa		2.98	□□□□□ -1.93
MATR3-223	ENST00000514402	AKAP17A	Q02040	695 aa	Known RBP	2.98	□□□□□ -1.93
MATR3-223	ENST00000514402	ARHGAP1	Q07960	439 aa		2.98	□□□□□ -1.93
MATR3-223	ENST00000514402	AP1B1	Q10567	949 aa		2.98	□□□□□ -1.93
MATR3-223	ENST00000514402	MEF2D	Q14814	521 aa		2.98	□□□□□ -1.93
MATR3-223	ENST00000514402	AGAP6	Q5VW22	663 aa		2.98	□□□□□ -1.93
MATR3-223	ENST00000514402	DCLRE1A	Q6PJP8	1040 aa		2.98	□□□□□ -1.93
MATR3-223	ENST00000514402	NUP93	Q8N1F7	819 aa		2.98	□□□□□ -1.93
MATR3-223	ENST00000514402	ARL14	Q8N4G2	192 aa		2.98	□□□□□ -1.93
MATR3-223	ENST00000514402	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	2.98	□□□□□ -1.93
MATR3-223	ENST00000514402	GPR148	Q8TDV2	347 aa		2.98	□□□□□ -1.93
MATR3-223	ENST00000514402	UBLCP1	Q8WVY7	318 aa	Predicted RBP	2.98	□□□□□ -1.93
MATR3-223	ENST00000514402	CORO2A	Q92828	525 aa		2.98	□□□□□ -1.93
MATR3-223	ENST00000514402	SIGLEC12	Q96PQ1	595 aa		2.98	□□□□□ -1.93
MATR3-223	ENST00000514402	ERGIC2	Q96RQ1	377 aa		2.98	□□□□□ -1.93
MATR3-223	ENST00000514402	MCCC1	Q96RQ3	725 aa	Predicted RBP	2.98	□□□□□ -1.93
MATR3-223	ENST00000514402	RANBP9	Q96S59	729 aa		2.98	□□□□□ -1.93
MATR3-223	ENST00000514402	C2orf40	Q9H1Z8	148 aa		2.98	□□□□□ -1.93
MATR3-223	ENST00000514402	ZNF665	Q9H7R5	613 aa		2.98	□□□□□ -1.93
MATR3-223	ENST00000514402	ABCC13	Q9NSE7	274 aa		2.98	□□□□□ -1.93
MATR3-223	ENST00000514402	ARMCX1	Q9P291	453 aa		2.98	□□□□□ -1.93
MATR3-223	ENST00000514402	CIDEB	Q9UHD4	219 aa		2.98	□□□□□ -1.93
MATR3-223	ENST00000514402	IKZF3	Q9UKT9	509 aa		2.98	□□□□□ -1.93
MATR3-223	ENST00000514402	KNSTRN	Q9Y448	316 aa		2.98	□□□□□ -1.93
MATR3-223	ENST00000514402	NOTCH2	Q04721	2471 aa		2.97	□□□□□ -1.93
MATR3-223	ENST00000514402	IGKV6D-21	A0A0A0MT36	114 aa		2.97	□□□□□ -1.93
MATR3-223	ENST00000514402	SDR42E2	A6NKP2	422 aa		2.97	□□□□□ -1.93
MATR3-223	ENST00000514402		H0Y9J4	135 aa		2.97	□□□□□ -1.93

Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms