RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 CYP4F12Q9HCS2 524 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 AASSQ9UDR5 926 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 A0A1W2PQF6 199 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 CYP7B1O75881 506 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 XPAP23025 273 aaPredicted RBP7.06□□□□□ -1.28
CLIP1-205ENST00000514271 KIR2DL3P43628 341 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 SLC6A12P48065 614 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 EPHA4P54764 986 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 CLDN8P56748 225 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 ACSM1Q08AH1 577 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 SSPNQ14714 243 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 CST6Q15828 149 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 TMEM52BQ4KMG9 183 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 SOWAHCQ53LP3 525 aaPredicted RBP7.06□□□□□ -1.28
CLIP1-205ENST00000514271 ZNF805Q5CZA5 627 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 SLC30A6Q6NXT4 461 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 ZNF782Q6ZMW2 699 aaPredicted RBP7.06□□□□□ -1.28
CLIP1-205ENST00000514271 GDPGP1Q6ZNW5 385 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 EIF3MQ7L2H7 374 aaKnown RBP7.06□□□□□ -1.28
CLIP1-205ENST00000514271 GPAT4Q86UL3 456 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 IQCHQ86VS3 1027 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 PLCZ1Q86YW0 608 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 CMIPQ8IY22 773 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 APCDD1Q8J025 514 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 CCNYL1Q8N7R7 359 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 OR8J2Q8NGG1 315 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 WFDC5Q8TCV5 224 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 HAVCR2Q8TDQ0 301 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 UTP15Q8TED0 518 aaKnown RBP7.06□□□□□ -1.28
CLIP1-205ENST00000514271 SLC13A3Q8WWT9 602 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 KCNJ9Q92806 393 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 SLC25A46Q96AG3 418 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 PHF21BQ96EK2 531 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 PDXPQ96GD0 296 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 RADILQ96JH8 1075 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 ZNF556Q9HAH1 456 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 ISYNA1Q9NPH2 558 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 LHX3Q9UBR4 397 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 FNDC3AQ9Y2H6 1198 aaKnown RBP7.06□□□□□ -1.28
CLIP1-205ENST00000514271 GPSM3Q9Y4H4 160 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 TCRBV21S2A2A0A5A6 115 aa7.05□□□□□ -1.28
CLIP1-205ENST00000514271 C7orf66A4D0T2 115 aa7.05□□□□□ -1.28
CLIP1-205ENST00000514271 OR51F1A6NGY5 319 aa7.05□□□□□ -1.28
CLIP1-205ENST00000514271 OR6C65A6NJZ3 312 aa7.05□□□□□ -1.28
CLIP1-205ENST00000514271 B8ZZF3 427 aa7.05□□□□□ -1.28
CLIP1-205ENST00000514271 ZNF670-ZNF695F2Z2N8 137 aa7.05□□□□□ -1.28
CLIP1-205ENST00000514271 SGK494L7N484 410 aa7.05□□□□□ -1.28
CLIP1-205ENST00000514271 CBX4O00257 560 aa7.05□□□□□ -1.28
CLIP1-205ENST00000514271 CACNB4O00305 520 aaPredicted RBP7.05□□□□□ -1.28
CLIP1-205ENST00000514271 CDC7O00311 574 aa7.05□□□□□ -1.28
CLIP1-205ENST00000514271 RGS10O43665 173 aa7.05□□□□□ -1.28
CLIP1-205ENST00000514271 FAM20BO75063 409 aa7.05□□□□□ -1.28
CLIP1-205ENST00000514271 SEC24DO94855 1032 aaPredicted RBP7.05□□□□□ -1.28
CLIP1-205ENST00000514271 CCNDBP1O95273 360 aa7.05□□□□□ -1.28
CLIP1-205ENST00000514271 ZNF682O95780 498 aa7.05□□□□□ -1.28
CLIP1-205ENST00000514271 CST1P01037 141 aa7.05□□□□□ -1.28
CLIP1-205ENST00000514271 CKMT1AP12532 417 aa7.05□□□□□ -1.28
CLIP1-205ENST00000514271 CPN2P22792 545 aa7.05□□□□□ -1.28
CLIP1-205ENST00000514271 FMO3P31513 532 aa7.05□□□□□ -1.28
CLIP1-205ENST00000514271 CTSKP43235 329 aa7.05□□□□□ -1.28
CLIP1-205ENST00000514271 MAPK10P53779 464 aa7.05□□□□□ -1.28
CLIP1-205ENST00000514271 CLDN20P56880 219 aa7.05□□□□□ -1.28
CLIP1-205ENST00000514271 COLEC12Q5KU26 742 aa7.05□□□□□ -1.28
CLIP1-205ENST00000514271 TMEM215Q68D42 235 aa7.05□□□□□ -1.28
CLIP1-205ENST00000514271 ZNF765Q7L2R6 523 aa7.05□□□□□ -1.28
CLIP1-205ENST00000514271 GOLGA7Q7Z5G4 137 aa7.05□□□□□ -1.28
CLIP1-205ENST00000514271 NKAPQ8N5F7 415 aaKnown RBP7.05□□□□□ -1.28
CLIP1-205ENST00000514271 OR7D4Q8NG98 312 aa7.05□□□□□ -1.28
CLIP1-205ENST00000514271 CREB3L4Q8TEY5 395 aa7.05□□□□□ -1.28
CLIP1-205ENST00000514271 ULK4Q96C45 1275 aa7.05□□□□□ -1.28
CLIP1-205ENST00000514271 LIN7BQ9HAP6 207 aa7.05□□□□□ -1.28
CLIP1-205ENST00000514271 TSR3Q9UJK0 312 aaKnown RBP7.05□□□□□ -1.28
CLIP1-205ENST00000514271 ZNF451Q9Y4E5 1061 aa7.05□□□□□ -1.28
CLIP1-205ENST00000514271 RNF103-CHMP3A0A140T963 221 aa7.05□□□□□ -1.28
CLIP1-205ENST00000514271 ELOVL7A1L3X0 281 aa7.05□□□□□ -1.28
CLIP1-205ENST00000514271 HYKKA2RU49 373 aa7.05□□□□□ -1.28
CLIP1-205ENST00000514271 MEIOCA2RUB1 952 aa7.05□□□□□ -1.28
CLIP1-205ENST00000514271 ZW10O43264 779 aa7.05□□□□□ -1.28
CLIP1-205ENST00000514271 VPS26AO75436 327 aa7.05□□□□□ -1.28
CLIP1-205ENST00000514271 ERN1O75460 977 aaKnown RBP7.05□□□□□ -1.28
CLIP1-205ENST00000514271 C9P02748 559 aa7.05□□□□□ -1.28
CLIP1-205ENST00000514271 HOXC4P09017 264 aaPredicted RBP7.05□□□□□ -1.28
CLIP1-205ENST00000514271 GABRG2P18507 467 aa7.05□□□□□ -1.28
CLIP1-205ENST00000514271 TSPAN8P19075 237 aa7.05□□□□□ -1.28
CLIP1-205ENST00000514271 PRKACGP22612 351 aa7.05□□□□□ -1.28
CLIP1-205ENST00000514271 TNFSF8P32971 234 aa7.05□□□□□ -1.28
CLIP1-205ENST00000514271 OR3A3P47888 321 aa7.05□□□□□ -1.28
CLIP1-205ENST00000514271 RAE1P78406 368 aaKnown RBP7.05□□□□□ -1.28
CLIP1-205ENST00000514271 RELQ04864 619 aaPredicted RBP7.05□□□□□ -1.28
CLIP1-205ENST00000514271 ABHD18Q0P651 414 aa7.05□□□□□ -1.28
CLIP1-205ENST00000514271 TEAD4Q15561 434 aa7.05□□□□□ -1.28
CLIP1-205ENST00000514271 TMEM65Q6PI78 240 aa7.05□□□□□ -1.28
CLIP1-205ENST00000514271 PAQR3Q6TCH7 311 aa7.05□□□□□ -1.28
CLIP1-205ENST00000514271 CD300LDQ6UXZ3 194 aa7.05□□□□□ -1.28
CLIP1-205ENST00000514271 DNM1P46Q6ZS02 220 aa7.05□□□□□ -1.28
CLIP1-205ENST00000514271 PRICKLE2Q7Z3G6 844 aa7.05□□□□□ -1.28
CLIP1-205ENST00000514271 L3MBTL4Q8NA19 623 aa7.05□□□□□ -1.28
CLIP1-205ENST00000514271 SETD9Q8NE22 299 aa7.05□□□□□ -1.28
CLIP1-205ENST00000514271 TTC16Q8NEE8 873 aa7.05□□□□□ -1.28
CLIP1-205ENST00000514271 B3GNT2Q9NY97 397 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms