RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 FEN1P39748 380 aaKnown RBP10.62□□□□□ -0.71
HTT-213ENST00000513806 ST13P50502 369 aaKnown RBP10.62□□□□□ -0.71
HTT-213ENST00000513806 ERVK-8P63133 956 aa10.62□□□□□ -0.71
HTT-213ENST00000513806 EMX2Q04743 252 aa10.62□□□□□ -0.71
HTT-213ENST00000513806 SSPNQ14714 243 aa10.62□□□□□ -0.71
HTT-213ENST00000513806 NSDHLQ15738 373 aa10.62□□□□□ -0.71
HTT-213ENST00000513806 UGT8Q16880 541 aa10.62□□□□□ -0.71
HTT-213ENST00000513806 SFT2D3Q587I9 215 aa10.62□□□□□ -0.71
HTT-213ENST00000513806 BROXQ5VW32 411 aa10.62□□□□□ -0.71
HTT-213ENST00000513806 TMEM205Q6UW68 189 aa10.62□□□□□ -0.71
HTT-213ENST00000513806 QSOX2Q6ZRP7 698 aa10.62□□□□□ -0.71
HTT-213ENST00000513806 MRGPREQ86SM8 312 aa10.62□□□□□ -0.71
HTT-213ENST00000513806 TICAM1Q8IUC6 712 aa10.62□□□□□ -0.71
HTT-213ENST00000513806 ZNF595Q8IYB9 648 aa10.62□□□□□ -0.71
HTT-213ENST00000513806 TMEM132CQ8N3T6 1108 aa10.62□□□□□ -0.71
HTT-213ENST00000513806 PLPP5Q8NEB5 264 aa10.62□□□□□ -0.71
HTT-213ENST00000513806 OR7A2PQ8NGA2 310 aa10.62□□□□□ -0.71
HTT-213ENST00000513806 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.62□□□□□ -0.71
HTT-213ENST00000513806 CIDECQ96AQ7 238 aaPredicted RBP10.62□□□□□ -0.71
HTT-213ENST00000513806 KLHL29Q96CT2 875 aa10.62□□□□□ -0.71
HTT-213ENST00000513806 MAELQ96JY0 434 aaKnown RBP10.62□□□□□ -0.71
HTT-213ENST00000513806 TEX37Q96LM6 180 aa10.62□□□□□ -0.71
HTT-213ENST00000513806 TMEM120AQ9BXJ8 343 aa10.62□□□□□ -0.71
HTT-213ENST00000513806 ALOXE3Q9BYJ1 711 aa10.62□□□□□ -0.71
HTT-213ENST00000513806 MYNNQ9NPC7 610 aa10.62□□□□□ -0.71
HTT-213ENST00000513806 PRDM9Q9NQV7 894 aa10.62□□□□□ -0.71
HTT-213ENST00000513806 FBXL4Q9UKA2 621 aa10.62□□□□□ -0.71
HTT-213ENST00000513806 NXT1Q9UKK6 140 aaKnown RBP10.62□□□□□ -0.71
HTT-213ENST00000513806 SPACA6W5XKT8 324 aa10.62□□□□□ -0.71
HTT-213ENST00000513806 USP24Q9UPU5 2620 aa10.62□□□□□ -0.71
HTT-213ENST00000513806 A0A087WV48 116 aa10.61□□□□□ -0.71
HTT-213ENST00000513806 TCRBV16S1A1N1A0A5B0 115 aa10.61□□□□□ -0.71
HTT-213ENST00000513806 TMEM8BA6NDV4 472 aa10.61□□□□□ -0.71
HTT-213ENST00000513806 ZNF891A8MT65 544 aaPredicted RBP10.61□□□□□ -0.71
HTT-213ENST00000513806 HRKO00198 91 aa10.61□□□□□ -0.71
HTT-213ENST00000513806 CTNSO60931 367 aa10.61□□□□□ -0.71
HTT-213ENST00000513806 DNAJB5O75953 348 aa10.61□□□□□ -0.71
HTT-213ENST00000513806 IFNA16P05015 189 aa10.61□□□□□ -0.71
HTT-213ENST00000513806 COX6A1P12074 109 aa10.61□□□□□ -0.71
HTT-213ENST00000513806 DRD4P21917 467 aa10.61□□□□□ -0.71
HTT-213ENST00000513806 MMP11P24347 488 aa10.61□□□□□ -0.71
HTT-213ENST00000513806 IL12AP29459 219 aa10.61□□□□□ -0.71
HTT-213ENST00000513806 TLX1P31314 330 aaPredicted RBP10.61□□□□□ -0.71
HTT-213ENST00000513806 OR4D2P58180 307 aa10.61□□□□□ -0.71
HTT-213ENST00000513806 UFM1P61960 85 aa10.61□□□□□ -0.71
HTT-213ENST00000513806 TRA2BP62995 288 aaKnown RBP10.61□□□□□ -0.71
HTT-213ENST00000513806 STX4Q12846 297 aa10.61□□□□□ -0.71
HTT-213ENST00000513806 RAPSNQ13702 412 aa10.61□□□□□ -0.71
HTT-213ENST00000513806 PCOLCEQ15113 449 aa10.61□□□□□ -0.71
HTT-213ENST00000513806 LTB4RQ15722 352 aa10.61□□□□□ -0.71
HTT-213ENST00000513806 ST3GAL2Q16842 350 aa10.61□□□□□ -0.71
HTT-213ENST00000513806 MPEG1Q2M385 716 aa10.61□□□□□ -0.71
HTT-213ENST00000513806 OR52E8Q6IFG1 317 aa10.61□□□□□ -0.71
HTT-213ENST00000513806 SLC48A1Q6P1K1 146 aa10.61□□□□□ -0.71
HTT-213ENST00000513806 CPEB2Q7Z5Q1 589 aaKnown RBP10.61□□□□□ -0.71
HTT-213ENST00000513806 ZNF321PQ8N8H1 164 aa10.61□□□□□ -0.71
HTT-213ENST00000513806 OR11G2Q8NGC1 345 aa10.61□□□□□ -0.71
HTT-213ENST00000513806 ACTRT2Q8TDY3 377 aa10.61□□□□□ -0.71
HTT-213ENST00000513806 METTL21AQ8WXB1 218 aa10.61□□□□□ -0.71
HTT-213ENST00000513806 CNRIP1Q96F85 164 aaPredicted RBP10.61□□□□□ -0.71
HTT-213ENST00000513806 CCT7Q99832 543 aa10.61□□□□□ -0.71
HTT-213ENST00000513806 WDR77Q9BQA1 342 aaPredicted RBP10.61□□□□□ -0.71
HTT-213ENST00000513806 EFHD1Q9BUP0 239 aa10.61□□□□□ -0.71
HTT-213ENST00000513806 TRIM55Q9BYV6 548 aa10.61□□□□□ -0.71
HTT-213ENST00000513806 ANKRA2Q9H9E1 313 aa10.61□□□□□ -0.71
HTT-213ENST00000513806 WDR41Q9HAD4 459 aa10.61□□□□□ -0.71
HTT-213ENST00000513806 CLK4Q9HAZ1 481 aaKnown RBP10.61□□□□□ -0.71
HTT-213ENST00000513806 ZNF160Q9HCG1 818 aa10.61□□□□□ -0.71
HTT-213ENST00000513806 TCF7L2Q9NQB0 619 aa10.61□□□□□ -0.71
HTT-213ENST00000513806 PFDN4Q9NQP4 134 aa10.61□□□□□ -0.71
HTT-213ENST00000513806 SEMA3GQ9NS98 782 aa10.61□□□□□ -0.71
HTT-213ENST00000513806 AIG1Q9NVV5 245 aa10.61□□□□□ -0.71
HTT-213ENST00000513806 P4HTMQ9NXG6 502 aa10.61□□□□□ -0.71
HTT-213ENST00000513806 MS4A12Q9NXJ0 267 aa10.61□□□□□ -0.71
HTT-213ENST00000513806 NOP53Q9NZM5 478 aaKnown RBP10.61□□□□□ -0.71
HTT-213ENST00000513806 UTS2RQ9UKP6 389 aa10.61□□□□□ -0.71
HTT-213ENST00000513806 EIF3LQ9Y262 564 aaKnown RBP10.61□□□□□ -0.71
HTT-213ENST00000513806 MRPS33Q9Y291 106 aaKnown RBP10.61□□□□□ -0.71
HTT-213ENST00000513806 MMACHCQ9Y4U1 282 aa10.61□□□□□ -0.71
HTT-213ENST00000513806 CPAMD8Q8IZJ3 1885 aa10.6□□□□□ -0.71
HTT-213ENST00000513806 EML6Q6ZMW3 1958 aa10.6□□□□□ -0.71
HTT-213ENST00000513806 IGHV1-45A0A0A0MS14 117 aa10.6□□□□□ -0.71
HTT-213ENST00000513806 C1orf226A1L170 272 aa10.6□□□□□ -0.71
HTT-213ENST00000513806 GABRR3A8MPY1 467 aa10.6□□□□□ -0.71
HTT-213ENST00000513806 K7ENP7 123 aa10.6□□□□□ -0.71
HTT-213ENST00000513806 CLDN4O14493 209 aa10.6□□□□□ -0.71
HTT-213ENST00000513806 VPS4BO75351 444 aa10.6□□□□□ -0.71
HTT-213ENST00000513806 NME6O75414 186 aaPredicted RBP10.6□□□□□ -0.71
HTT-213ENST00000513806 GPR75O95800 540 aa10.6□□□□□ -0.71
HTT-213ENST00000513806 CT62P0C5K7 136 aa10.6□□□□□ -0.71
HTT-213ENST00000513806 ACPPP15309 386 aa10.6□□□□□ -0.71
HTT-213ENST00000513806 DDCP20711 480 aa10.6□□□□□ -0.71
HTT-213ENST00000513806 IL10P22301 178 aa10.6□□□□□ -0.71
HTT-213ENST00000513806 PIK3R1P27986 724 aa10.6□□□□□ -0.71
HTT-213ENST00000513806 XKP51811 444 aa10.6□□□□□ -0.71
HTT-213ENST00000513806 HSD17B7P56937 341 aa10.6□□□□□ -0.71
HTT-213ENST00000513806 TMPRSS3P57727 454 aa10.6□□□□□ -0.71
HTT-213ENST00000513806 FOXK2Q01167 660 aa10.6□□□□□ -0.71
HTT-213ENST00000513806 ACTN3Q08043 901 aaPredicted RBP10.6□□□□□ -0.71
HTT-213ENST00000513806 Q0VFX4 171 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms