RNA–Protein interactions for RNA: ENST00000509109.5

CCSER1-208, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 1,070 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-208ENST00000509109 POPDC3Q9HBV1 291 aa6.97□□□□□ -1.29
CCSER1-208ENST00000509109 PLA2G3Q9NZ20 509 aa6.97□□□□□ -1.29
CCSER1-208ENST00000509109 TXNDC16Q9P2K2 825 aa6.97□□□□□ -1.29
CCSER1-208ENST00000509109 COPG2Q9UBF2 871 aa6.97□□□□□ -1.29
CCSER1-208ENST00000509109 SH2B3Q9UQQ2 575 aa6.97□□□□□ -1.29
CCSER1-208ENST00000509109 ENTPD4Q9Y227 616 aa6.97□□□□□ -1.29
CCSER1-208ENST00000509109 NPFFR2Q9Y5X5 522 aa6.97□□□□□ -1.29
CCSER1-208ENST00000509109 TEX264Q9Y6I9 313 aa6.97□□□□□ -1.29
CCSER1-208ENST00000509109 TRGV8A0A0C4DH27 118 aa6.96□□□□□ -1.3
CCSER1-208ENST00000509109 IGHV3-20A0A0C4DH32 117 aa6.96□□□□□ -1.3
CCSER1-208ENST00000509109 ZNF860A6NHJ4 632 aa6.96□□□□□ -1.3
CCSER1-208ENST00000509109 FCHO1O14526 889 aa6.96□□□□□ -1.3
CCSER1-208ENST00000509109 PRODHO43272 600 aa6.96□□□□□ -1.3
CCSER1-208ENST00000509109 ZG16O60844 167 aa6.96□□□□□ -1.3
CCSER1-208ENST00000509109 BANF1O75531 89 aa6.96□□□□□ -1.3
CCSER1-208ENST00000509109 CDC123O75794 336 aaPredicted RBP6.96□□□□□ -1.3
CCSER1-208ENST00000509109 SEC31AO94979 1220 aaKnown RBP6.96□□□□□ -1.3
CCSER1-208ENST00000509109 ZNF888P0CJ79 500 aaPredicted RBP6.96□□□□□ -1.3
CCSER1-208ENST00000509109 RNH1P13489 461 aaKnown RBP6.96□□□□□ -1.3
CCSER1-208ENST00000509109 GNAZP19086 355 aa6.96□□□□□ -1.3
CCSER1-208ENST00000509109 SAT1P21673 171 aa6.96□□□□□ -1.3
CCSER1-208ENST00000509109 GABRB3P28472 473 aa6.96□□□□□ -1.3
CCSER1-208ENST00000509109 KCNK10P57789 538 aa6.96□□□□□ -1.3
CCSER1-208ENST00000509109 OR4D2P58180 307 aa6.96□□□□□ -1.3
CCSER1-208ENST00000509109 SLC26A5P58743 744 aa6.96□□□□□ -1.3
CCSER1-208ENST00000509109 STXBP1P61764 594 aaKnown RBP6.96□□□□□ -1.3
CCSER1-208ENST00000509109 CDKL1Q00532 357 aa6.96□□□□□ -1.3
CCSER1-208ENST00000509109 REEP5Q00765 189 aa6.96□□□□□ -1.3
CCSER1-208ENST00000509109 TIAL1Q01085 375 aaKnown RBP eCLIP6.96□□□□□ -1.3
CCSER1-208ENST00000509109 RHAGQ02094 409 aa6.96□□□□□ -1.3
CCSER1-208ENST00000509109 OC90Q02509 493 aaPredicted RBP6.96□□□□□ -1.3
CCSER1-208ENST00000509109 TUBA3CQ13748 450 aa6.96□□□□□ -1.3
CCSER1-208ENST00000509109 USP10Q14694 798 aaKnown RBP6.96□□□□□ -1.3
CCSER1-208ENST00000509109 TERF2Q15554 542 aa6.96□□□□□ -1.3
CCSER1-208ENST00000509109 OR1C1Q15619 314 aa6.96□□□□□ -1.3
CCSER1-208ENST00000509109 PPP1R3AQ16821 1122 aa6.96□□□□□ -1.3
CCSER1-208ENST00000509109 KRTCAP3Q53RY4 240 aa6.96□□□□□ -1.3
CCSER1-208ENST00000509109 H3F3CQ6NXT2 135 aa6.96□□□□□ -1.3
CCSER1-208ENST00000509109 TUBA3EQ6PEY2 450 aa6.96□□□□□ -1.3
CCSER1-208ENST00000509109 SBSNQ6UWP8 590 aa6.96□□□□□ -1.3
CCSER1-208ENST00000509109 QSOX2Q6ZRP7 698 aa6.96□□□□□ -1.3
CCSER1-208ENST00000509109 THOC6Q86W42 341 aaKnown RBP6.96□□□□□ -1.3
CCSER1-208ENST00000509109 TICAM1Q8IUC6 712 aa6.96□□□□□ -1.3
CCSER1-208ENST00000509109 CRLF3Q8IUI8 442 aa6.96□□□□□ -1.3
CCSER1-208ENST00000509109 KLHL7Q8IXQ5 586 aa6.96□□□□□ -1.3
CCSER1-208ENST00000509109 EID3Q8N140 333 aa6.96□□□□□ -1.3
CCSER1-208ENST00000509109 TCAIMQ8N3R3 496 aa6.96□□□□□ -1.3
CCSER1-208ENST00000509109 ZNF808Q8N4W9 903 aaPredicted RBP6.96□□□□□ -1.3
CCSER1-208ENST00000509109 PLPP5Q8NEB5 264 aa6.96□□□□□ -1.3
CCSER1-208ENST00000509109 THAP3Q8WTV1 239 aaPredicted RBP6.96□□□□□ -1.3
CCSER1-208ENST00000509109 CDKL2Q92772 493 aa6.96□□□□□ -1.3
CCSER1-208ENST00000509109 TMEM125Q96AQ2 219 aa6.96□□□□□ -1.3
CCSER1-208ENST00000509109 MOCOSQ96EN8 888 aa6.96□□□□□ -1.3
CCSER1-208ENST00000509109 FAR2Q96K12 515 aa6.96□□□□□ -1.3
CCSER1-208ENST00000509109 CAPZA3Q96KX2 299 aa6.96□□□□□ -1.3
CCSER1-208ENST00000509109 TSNARE1Q96NA8 513 aa6.96□□□□□ -1.3
CCSER1-208ENST00000509109 OR4K3Q96R72 315 aa6.96□□□□□ -1.3
CCSER1-208ENST00000509109 NAPGQ99747 312 aaPredicted RBP6.96□□□□□ -1.3
CCSER1-208ENST00000509109 MACROD1Q9BQ69 325 aa6.96□□□□□ -1.3
CCSER1-208ENST00000509109 KRTAP9-3Q9BYQ3 159 aa6.96□□□□□ -1.3
CCSER1-208ENST00000509109 CNOT10Q9H9A5 744 aaKnown RBP6.96□□□□□ -1.3
CCSER1-208ENST00000509109 GRPEL1Q9HAV7 217 aa6.96□□□□□ -1.3
CCSER1-208ENST00000509109 CHST11Q9NPF2 352 aa6.96□□□□□ -1.3
CCSER1-208ENST00000509109 LANCL2Q9NS86 450 aa6.96□□□□□ -1.3
CCSER1-208ENST00000509109 TRMT1Q9NXH9 659 aaKnown RBP6.96□□□□□ -1.3
CCSER1-208ENST00000509109 RNF14Q9UBS8 474 aa6.96□□□□□ -1.3
CCSER1-208ENST00000509109 MRPS33Q9Y291 106 aaKnown RBP6.96□□□□□ -1.3
CCSER1-208ENST00000509109 KLF2Q9Y5W3 355 aaPredicted RBP6.96□□□□□ -1.3
CCSER1-208ENST00000509109 SAR1BQ9Y6B6 198 aa6.96□□□□□ -1.3
CCSER1-208ENST00000509109 CACNA1DQ01668 2161 aa6.96□□□□□ -1.3
CCSER1-208ENST00000509109 ANKRD17O75179 2603 aaKnown RBP6.96□□□□□ -1.3
CCSER1-208ENST00000509109 CSMD2Q7Z408 3487 aa6.95□□□□□ -1.3
CCSER1-208ENST00000509109 TCRBV5S2A0A599 114 aa6.95□□□□□ -1.3
CCSER1-208ENST00000509109 NPEPPSL1A6NEC2 478 aa6.95□□□□□ -1.3
CCSER1-208ENST00000509109 SAGE2PA6NJ88 616 aa6.95□□□□□ -1.3
CCSER1-208ENST00000509109 GABRR3A8MPY1 467 aa6.95□□□□□ -1.3
CCSER1-208ENST00000509109 PRSS44E7EML9 344 aa6.95□□□□□ -1.3
CCSER1-208ENST00000509109 CCL21O00585 134 aa6.95□□□□□ -1.3
CCSER1-208ENST00000509109 CHST10O43529 356 aa6.95□□□□□ -1.3
CCSER1-208ENST00000509109 LCMT2O60294 686 aaKnown RBP6.95□□□□□ -1.3
CCSER1-208ENST00000509109 SLC19A2O60779 497 aa6.95□□□□□ -1.3
CCSER1-208ENST00000509109 H2AFYO75367 372 aaKnown RBP6.95□□□□□ -1.3
CCSER1-208ENST00000509109 WDR47O94967 919 aa6.95□□□□□ -1.3
CCSER1-208ENST00000509109 SERPINA6P08185 405 aa6.95□□□□□ -1.3
CCSER1-208ENST00000509109 ZNF24P17028 368 aa6.95□□□□□ -1.3
CCSER1-208ENST00000509109 CA7P43166 264 aa6.95□□□□□ -1.3
CCSER1-208ENST00000509109 SMSP52788 366 aa6.95□□□□□ -1.3
CCSER1-208ENST00000509109 EFNA3P52797 238 aa6.95□□□□□ -1.3
CCSER1-208ENST00000509109 ITGA8P53708 1063 aa6.95□□□□□ -1.3
CCSER1-208ENST00000509109 GNG11P61952 73 aa6.95□□□□□ -1.3
CCSER1-208ENST00000509109 ALDH6A1Q02252 535 aaKnown RBP6.95□□□□□ -1.3
CCSER1-208ENST00000509109 TGM3Q08188 693 aa6.95□□□□□ -1.3
CCSER1-208ENST00000509109 PDIA2Q13087 525 aaKnown RBP6.95□□□□□ -1.3
CCSER1-208ENST00000509109 CALCOCO2Q13137 446 aa6.95□□□□□ -1.3
CCSER1-208ENST00000509109 ART3Q13508 389 aa6.95□□□□□ -1.3
CCSER1-208ENST00000509109 RCN2Q14257 317 aa6.95□□□□□ -1.3
CCSER1-208ENST00000509109 CATSPEREQ5SY80 951 aa6.95□□□□□ -1.3
CCSER1-208ENST00000509109 TRMT10BQ6PF06 316 aaKnown RBP6.95□□□□□ -1.3
CCSER1-208ENST00000509109 TMIGD1Q6UXZ0 262 aa6.95□□□□□ -1.3
CCSER1-208ENST00000509109 ZC3HC1Q86WB0 502 aaKnown RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms