RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 SRD5A2P31213 254 aa3.55□□□□□ -1.84
TRAPPC13-209ENST00000508304 MDH1P40925 334 aaKnown RBP3.55□□□□□ -1.84
TRAPPC13-209ENST00000508304 MS4A2Q01362 244 aa3.55□□□□□ -1.84
TRAPPC13-209ENST00000508304 GABPB1Q06547 395 aaPredicted RBP3.55□□□□□ -1.84
TRAPPC13-209ENST00000508304 NME3Q13232 169 aa3.55□□□□□ -1.84
TRAPPC13-209ENST00000508304 SQLEQ14534 574 aa3.55□□□□□ -1.84
TRAPPC13-209ENST00000508304 HERC3Q15034 1050 aa3.55□□□□□ -1.84
TRAPPC13-209ENST00000508304 RIPPLY2Q5TAB7 128 aa3.55□□□□□ -1.84
TRAPPC13-209ENST00000508304 LYPLAL1Q5VWZ2 237 aa3.55□□□□□ -1.84
TRAPPC13-209ENST00000508304 ZNF770Q6IQ21 691 aaPredicted RBP3.55□□□□□ -1.84
TRAPPC13-209ENST00000508304 SLC25A24Q6NUK1 477 aa3.55□□□□□ -1.84
TRAPPC13-209ENST00000508304 SLC27A4Q6P1M0 643 aa3.55□□□□□ -1.84
TRAPPC13-209ENST00000508304 RFPL4BQ6ZWI9 263 aa3.55□□□□□ -1.84
TRAPPC13-209ENST00000508304 G2E3Q7L622 706 aa3.55□□□□□ -1.84
TRAPPC13-209ENST00000508304 LACC1Q8IV20 430 aa3.55□□□□□ -1.84
TRAPPC13-209ENST00000508304 MISPQ8IVT2 679 aa3.55□□□□□ -1.84
TRAPPC13-209ENST00000508304 TDHQ8IZJ6 230 aa3.55□□□□□ -1.84
TRAPPC13-209ENST00000508304 ELMOD1Q8N336 334 aa3.55□□□□□ -1.84
TRAPPC13-209ENST00000508304 LRTM2Q8N967 370 aa3.55□□□□□ -1.84
TRAPPC13-209ENST00000508304 GMCL1P1Q8NEA9 526 aa3.55□□□□□ -1.84
TRAPPC13-209ENST00000508304 TRPV3Q8NET8 790 aa3.55□□□□□ -1.84
TRAPPC13-209ENST00000508304 OR56B1Q8NGI3 324 aa3.55□□□□□ -1.84
TRAPPC13-209ENST00000508304 C16orf58Q96GQ5 468 aa3.55□□□□□ -1.84
TRAPPC13-209ENST00000508304 RBM18Q96H35 190 aaKnown RBP3.55□□□□□ -1.84
TRAPPC13-209ENST00000508304 CXorf58Q96LI9 332 aa3.55□□□□□ -1.84
TRAPPC13-209ENST00000508304 FTHL17Q9BXU8 183 aa3.55□□□□□ -1.84
TRAPPC13-209ENST00000508304 OR2B2Q9GZK3 357 aa3.55□□□□□ -1.84
TRAPPC13-209ENST00000508304 WWTR1Q9GZV5 400 aa3.55□□□□□ -1.84
TRAPPC13-209ENST00000508304 VAT1LQ9HCJ6 419 aa3.55□□□□□ -1.84
TRAPPC13-209ENST00000508304 ACOXLQ9NUZ1 547 aa3.55□□□□□ -1.84
TRAPPC13-209ENST00000508304 GTSE1Q9NYZ3 720 aa3.55□□□□□ -1.84
TRAPPC13-209ENST00000508304 OR6C2Q9NZP2 312 aa3.55□□□□□ -1.84
TRAPPC13-209ENST00000508304 ERVK-18Q9QC07 812 aa3.55□□□□□ -1.84
TRAPPC13-209ENST00000508304 NARFQ9UHQ1 456 aa3.55□□□□□ -1.84
TRAPPC13-209ENST00000508304 PSORS1C1Q9UIG5 152 aa3.55□□□□□ -1.84
TRAPPC13-209ENST00000508304 MGAT4BQ9UQ53 548 aa3.55□□□□□ -1.84
TRAPPC13-209ENST00000508304 SMC3Q9UQE7 1217 aa3.55□□□□□ -1.84
TRAPPC13-209ENST00000508304 PPP1R3CQ9UQK1 317 aa3.55□□□□□ -1.84
TRAPPC13-209ENST00000508304 ETV7Q9Y603 341 aa3.55□□□□□ -1.84
TRAPPC13-209ENST00000508304 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.55□□□□□ -1.84
TRAPPC13-209ENST00000508304 U3KQV3 271 aa3.55□□□□□ -1.84
TRAPPC13-209ENST00000508304 PRRC2AP48634 2157 aaKnown RBP3.55□□□□□ -1.84
TRAPPC13-209ENST00000508304 ATAD2BQ9ULI0 1458 aa3.54□□□□□ -1.84
TRAPPC13-209ENST00000508304 O00370 1275 aa3.54□□□□□ -1.84
TRAPPC13-209ENST00000508304 CHEK1O14757 476 aa3.54□□□□□ -1.84
TRAPPC13-209ENST00000508304 DUS4LO95620 317 aaKnown RBP3.54□□□□□ -1.84
TRAPPC13-209ENST00000508304 CXCL10P02778 98 aa3.54□□□□□ -1.84
TRAPPC13-209ENST00000508304 CYP2F1P24903 491 aa3.54□□□□□ -1.84
TRAPPC13-209ENST00000508304 CTNNA2P26232 953 aa3.54□□□□□ -1.84
TRAPPC13-209ENST00000508304 PAX9P55771 341 aa3.54□□□□□ -1.84
TRAPPC13-209ENST00000508304 HERV-K104P63124 156 aa3.54□□□□□ -1.84
TRAPPC13-209ENST00000508304 NUCB2P80303 420 aa3.54□□□□□ -1.84
TRAPPC13-209ENST00000508304 ELP6Q0PNE2 266 aa3.54□□□□□ -1.84
TRAPPC13-209ENST00000508304 OVGP1Q12889 678 aa3.54□□□□□ -1.84
TRAPPC13-209ENST00000508304 PDZK1IP1Q13113 114 aa3.54□□□□□ -1.84
TRAPPC13-209ENST00000508304 SGCGQ13326 291 aa3.54□□□□□ -1.84
TRAPPC13-209ENST00000508304 DRP2Q13474 957 aa3.54□□□□□ -1.84
TRAPPC13-209ENST00000508304 CEACAM7Q14002 265 aa3.54□□□□□ -1.84
TRAPPC13-209ENST00000508304 EPC2Q52LR7 807 aa3.54□□□□□ -1.84
TRAPPC13-209ENST00000508304 PDLIM3Q53GG5 364 aaPredicted RBP3.54□□□□□ -1.84
TRAPPC13-209ENST00000508304 HERC4Q5GLZ8 1057 aaPredicted RBP3.54□□□□□ -1.84
TRAPPC13-209ENST00000508304 CES4AQ5XG92 561 aa3.54□□□□□ -1.84
TRAPPC13-209ENST00000508304 HIST2H2AA3Q6FI13 130 aa3.54□□□□□ -1.84
TRAPPC13-209ENST00000508304 DHRS11Q6UWP2 260 aa3.54□□□□□ -1.84
TRAPPC13-209ENST00000508304 TMEM64Q6YI46 380 aa3.54□□□□□ -1.84
TRAPPC13-209ENST00000508304 C17orf107Q6ZR85 190 aa3.54□□□□□ -1.84
TRAPPC13-209ENST00000508304 C15orf52Q6ZUT6 534 aaKnown RBP3.54□□□□□ -1.84
TRAPPC13-209ENST00000508304 SLC24A5Q71RS6 500 aa3.54□□□□□ -1.84
TRAPPC13-209ENST00000508304 ZNF573Q86YE8 665 aa3.54□□□□□ -1.84
TRAPPC13-209ENST00000508304 KIRREL3Q8IZU9 778 aa3.54□□□□□ -1.84
TRAPPC13-209ENST00000508304 LRRC17Q8N6Y2 441 aa3.54□□□□□ -1.84
TRAPPC13-209ENST00000508304 RNF148Q8N7C7 305 aa3.54□□□□□ -1.84
TRAPPC13-209ENST00000508304 TCEANCQ8N8B7 351 aa3.54□□□□□ -1.84
TRAPPC13-209ENST00000508304 GPRC5AQ8NFJ5 357 aa3.54□□□□□ -1.84
TRAPPC13-209ENST00000508304 OR13C5Q8NGS8 318 aa3.54□□□□□ -1.84
TRAPPC13-209ENST00000508304 PIK3R3Q92569 461 aa3.54□□□□□ -1.84
TRAPPC13-209ENST00000508304 NXPE2Q96DL1 559 aa3.54□□□□□ -1.84
TRAPPC13-209ENST00000508304 MRPL38Q96DV4 380 aaKnown RBP3.54□□□□□ -1.84
TRAPPC13-209ENST00000508304 RPGRIP1Q96KN7 1286 aa3.54□□□□□ -1.84
TRAPPC13-209ENST00000508304 TXN2Q99757 166 aa3.54□□□□□ -1.84
TRAPPC13-209ENST00000508304 PIGQQ9BRB3 760 aa3.54□□□□□ -1.84
TRAPPC13-209ENST00000508304 FUNDC2Q9BWH2 189 aa3.54□□□□□ -1.84
TRAPPC13-209ENST00000508304 ZNF416Q9BWM5 594 aa3.54□□□□□ -1.84
TRAPPC13-209ENST00000508304 SIRPDQ9H106 197 aa3.54□□□□□ -1.84
TRAPPC13-209ENST00000508304 GANQ9H2C0 597 aa3.54□□□□□ -1.84
TRAPPC13-209ENST00000508304 CPVLQ9H3G5 476 aa3.54□□□□□ -1.84
TRAPPC13-209ENST00000508304 C3orf14Q9HBI5 128 aa3.54□□□□□ -1.84
TRAPPC13-209ENST00000508304 RAVER2Q9HCJ3 691 aaKnown RBP3.54□□□□□ -1.84
TRAPPC13-209ENST00000508304 HPS4Q9NQG7 708 aa3.54□□□□□ -1.84
TRAPPC13-209ENST00000508304 FAM212BQ9NTI7 297 aaPredicted RBP3.54□□□□□ -1.84
TRAPPC13-209ENST00000508304 PLEK2Q9NYT0 353 aa3.54□□□□□ -1.84
TRAPPC13-209ENST00000508304 CNOT2Q9NZN8 540 aaKnown RBP3.54□□□□□ -1.84
TRAPPC13-209ENST00000508304 VPS54Q9P1Q0 977 aa3.54□□□□□ -1.84
TRAPPC13-209ENST00000508304 POLKQ9UBT6 870 aa3.54□□□□□ -1.84
TRAPPC13-209ENST00000508304 DBF4Q9UBU7 674 aaPredicted RBP3.54□□□□□ -1.84
TRAPPC13-209ENST00000508304 LAMP5Q9UJQ1 280 aa3.54□□□□□ -1.84
TRAPPC13-209ENST00000508304 MRTO4Q9UKD2 239 aaKnown RBP3.54□□□□□ -1.84
TRAPPC13-209ENST00000508304 MAN1B1Q9UKM7 699 aa3.54□□□□□ -1.84
TRAPPC13-209ENST00000508304 MRPS2Q9Y399 296 aaKnown RBP3.54□□□□□ -1.84
TRAPPC13-209ENST00000508304 CLRN2A0PK11 232 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms