RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 CSMD1Q96PZ7 3565 aa13.25□□□□□ -0.29
RAB28-205ENST00000508274 FBN2P35556 2912 aa13.25□□□□□ -0.29
RAB28-205ENST00000508274 DNAJC13O75165 2243 aa13.24□□□□□ -0.29
RAB28-205ENST00000508274 PINLYPA6NC86 204 aa13.24□□□□□ -0.29
RAB28-205ENST00000508274 G3V3Y1 287 aa13.24□□□□□ -0.29
RAB28-205ENST00000508274 KLRC4-KLRK1H3BQV0 150 aa13.24□□□□□ -0.29
RAB28-205ENST00000508274 HRKO00198 91 aa13.24□□□□□ -0.29
RAB28-205ENST00000508274 TFECO14948 347 aaPredicted RBP13.24□□□□□ -0.29
RAB28-205ENST00000508274 TMPRSS11DO60235 418 aa13.24□□□□□ -0.29
RAB28-205ENST00000508274 ABOP16442 354 aa13.24□□□□□ -0.29
RAB28-205ENST00000508274 BSGP35613 385 aa13.24□□□□□ -0.29
RAB28-205ENST00000508274 ARL1P40616 181 aaPredicted RBP13.24□□□□□ -0.29
RAB28-205ENST00000508274 RNF4P78317 190 aa13.24□□□□□ -0.29
RAB28-205ENST00000508274 CDSNQ15517 529 aa13.24□□□□□ -0.29
RAB28-205ENST00000508274 SP5Q6BEB4 398 aaPredicted RBP13.24□□□□□ -0.29
RAB28-205ENST00000508274 RPS27LQ71UM5 84 aaKnown RBP13.24□□□□□ -0.29
RAB28-205ENST00000508274 GPR180Q86V85 440 aa13.24□□□□□ -0.29
RAB28-205ENST00000508274 ZCCHC7Q8N3Z6 543 aaKnown RBP13.24□□□□□ -0.29
RAB28-205ENST00000508274 ZNF808Q8N4W9 903 aaPredicted RBP13.24□□□□□ -0.29
RAB28-205ENST00000508274 L3MBTL4Q8NA19 623 aa13.24□□□□□ -0.29
RAB28-205ENST00000508274 AGAP11Q8TF27 550 aa13.24□□□□□ -0.29
RAB28-205ENST00000508274 UCN3Q969E3 161 aa13.24□□□□□ -0.29
RAB28-205ENST00000508274 MTFMTQ96DP5 389 aaKnown RBP13.24□□□□□ -0.29
RAB28-205ENST00000508274 SCYL1Q96KG9 808 aa13.24□□□□□ -0.29
RAB28-205ENST00000508274 ZBTB26Q9HCK0 441 aa13.24□□□□□ -0.29
RAB28-205ENST00000508274 TNPO3Q9Y5L0 923 aaKnown RBP13.24□□□□□ -0.29
RAB28-205ENST00000508274 IKBKGQ9Y6K9 419 aa13.24□□□□□ -0.29
RAB28-205ENST00000508274 DCHS2Q6V1P9 2916 aa13.24□□□□□ -0.29
RAB28-205ENST00000508274 A0A0A6YYD5 115 aa13.24□□□□□ -0.29
RAB28-205ENST00000508274 GLOD5A6NK44 160 aa13.24□□□□□ -0.29
RAB28-205ENST00000508274 TRIM49D1C9J1S8 452 aa13.24□□□□□ -0.29
RAB28-205ENST00000508274 CDC40O60508 579 aaKnown RBP eCLIP13.24□□□□□ -0.29
RAB28-205ENST00000508274 GBAP04062 536 aa13.24□□□□□ -0.29
RAB28-205ENST00000508274 TUBB4AP04350 444 aa13.24□□□□□ -0.29
RAB28-205ENST00000508274 ESRRAP11474 423 aaPredicted RBP13.24□□□□□ -0.29
RAB28-205ENST00000508274 PRF1P14222 555 aa13.24□□□□□ -0.29
RAB28-205ENST00000508274 PTX3P26022 381 aaPredicted RBP13.24□□□□□ -0.29
RAB28-205ENST00000508274 STT3AP46977 705 aa13.24□□□□□ -0.29
RAB28-205ENST00000508274 SERPINB9P50453 376 aa13.24□□□□□ -0.29
RAB28-205ENST00000508274 PHEXP78562 749 aa13.24□□□□□ -0.29
RAB28-205ENST00000508274 TRAF3Q13114 568 aa13.24□□□□□ -0.29
RAB28-205ENST00000508274 ZNF750Q32MQ0 723 aa13.24□□□□□ -0.29
RAB28-205ENST00000508274 CMPK2Q5EBM0 449 aa13.24□□□□□ -0.29
RAB28-205ENST00000508274 ZFP62Q8NB50 900 aaPredicted RBP13.24□□□□□ -0.29
RAB28-205ENST00000508274 POGLUT1Q8NBL1 392 aa13.24□□□□□ -0.29
RAB28-205ENST00000508274 MNS1Q8NEH6 495 aa13.24□□□□□ -0.29
RAB28-205ENST00000508274 OR52N2Q8NGI0 321 aa13.24□□□□□ -0.29
RAB28-205ENST00000508274 C16orf52Q8NHV5 167 aa13.24□□□□□ -0.29
RAB28-205ENST00000508274 MARVELD3Q96A59 401 aa13.24□□□□□ -0.29
RAB28-205ENST00000508274 REPS1Q96D71 796 aa13.24□□□□□ -0.29
RAB28-205ENST00000508274 DGAT2Q96PD7 388 aa13.24□□□□□ -0.29
RAB28-205ENST00000508274 CENPKQ9BS16 269 aa13.24□□□□□ -0.29
RAB28-205ENST00000508274 TIMMDC1Q9NPL8 285 aa13.24□□□□□ -0.29
RAB28-205ENST00000508274 MS4A12Q9NXJ0 267 aa13.24□□□□□ -0.29
RAB28-205ENST00000508274 PHF11Q9UIL8 331 aa13.24□□□□□ -0.29
RAB28-205ENST00000508274 PCTPQ9UKL6 214 aa13.24□□□□□ -0.29
RAB28-205ENST00000508274 ENTPD4Q9Y227 616 aa13.24□□□□□ -0.29
RAB28-205ENST00000508274 MEMO1Q9Y316 297 aa13.24□□□□□ -0.29
RAB28-205ENST00000508274 ASB4Q9Y574 426 aa13.24□□□□□ -0.29
RAB28-205ENST00000508274 CSMD2Q7Z408 3487 aa13.24□□□□□ -0.29
RAB28-205ENST00000508274 PKDREJQ9NTG1 2253 aa13.23□□□□□ -0.29
RAB28-205ENST00000508274 A0A1B0GTH9 108 aa13.23□□□□□ -0.29
RAB28-205ENST00000508274 A0A1B0GTL3 188 aa13.23□□□□□ -0.29
RAB28-205ENST00000508274 A0A1W2PR48 441 aa13.23□□□□□ -0.29
RAB28-205ENST00000508274 A0A1W2PS29 197 aa13.23□□□□□ -0.29
RAB28-205ENST00000508274 PROM1O43490 865 aa13.23□□□□□ -0.29
RAB28-205ENST00000508274 CLDN9O95484 217 aa13.23□□□□□ -0.29
RAB28-205ENST00000508274 RBP1P09455 135 aa13.23□□□□□ -0.29
RAB28-205ENST00000508274 SBK3P0C264 359 aa13.23□□□□□ -0.29
RAB28-205ENST00000508274 CCNG1P51959 295 aa13.23□□□□□ -0.29
RAB28-205ENST00000508274 ART3Q13508 389 aa13.23□□□□□ -0.29
RAB28-205ENST00000508274 CUL3Q13618 768 aa13.23□□□□□ -0.29
RAB28-205ENST00000508274 MRM1Q6IN84 353 aaKnown RBP13.23□□□□□ -0.29
RAB28-205ENST00000508274 MTFR2Q6P444 385 aa13.23□□□□□ -0.29
RAB28-205ENST00000508274 RPTNQ6XPR3 784 aa13.23□□□□□ -0.29
RAB28-205ENST00000508274 BNC2Q6ZN30 1099 aaPredicted RBP13.23□□□□□ -0.29
RAB28-205ENST00000508274 TAOK1Q7L7X3 1001 aa13.23□□□□□ -0.29
RAB28-205ENST00000508274 DOLPP1Q86YN1 238 aa13.23□□□□□ -0.29
RAB28-205ENST00000508274 C9orf40Q8IXQ3 194 aa13.23□□□□□ -0.29
RAB28-205ENST00000508274 ATP6V1E2Q96A05 226 aa13.23□□□□□ -0.29
RAB28-205ENST00000508274 SENP5Q96HI0 755 aaPredicted RBP13.23□□□□□ -0.29
RAB28-205ENST00000508274 TSPYL1Q9H0U9 437 aa13.23□□□□□ -0.29
RAB28-205ENST00000508274 DDX31Q9H8H2 851 aaKnown RBP13.23□□□□□ -0.29
RAB28-205ENST00000508274 SEMA4BQ9NPR2 832 aaPredicted RBP13.23□□□□□ -0.29
RAB28-205ENST00000508274 COPS7AQ9UBW8 275 aa13.23□□□□□ -0.29
RAB28-205ENST00000508274 APCP25054 2843 aa13.23□□□□□ -0.29
RAB28-205ENST00000508274 ABCA12Q86UK0 2595 aa13.22□□□□□ -0.29
RAB28-205ENST00000508274 A0A087WUV0 522 aaPredicted RBP13.22□□□□□ -0.29
RAB28-205ENST00000508274 FAM166BA8MTA8 275 aa13.22□□□□□ -0.29
RAB28-205ENST00000508274 STX16-NPEPL1H3BU86 382 aa13.22□□□□□ -0.29
RAB28-205ENST00000508274 STX16O14662 325 aa13.22□□□□□ -0.29
RAB28-205ENST00000508274 ADAM10O14672 748 aa13.22□□□□□ -0.29
RAB28-205ENST00000508274 HNRNPRO43390 633 aaKnown RBP13.22□□□□□ -0.29
RAB28-205ENST00000508274 KRT38O76015 456 aa13.22□□□□□ -0.29
RAB28-205ENST00000508274 PDE9AO76083 593 aa13.22□□□□□ -0.29
RAB28-205ENST00000508274 IGKV3-11P04433 115 aa13.22□□□□□ -0.29
RAB28-205ENST00000508274 COX7A2P14406 83 aa13.22□□□□□ -0.29
RAB28-205ENST00000508274 HTR1EP28566 365 aa13.22□□□□□ -0.29
RAB28-205ENST00000508274 GCAP28676 217 aa13.22□□□□□ -0.29
RAB28-205ENST00000508274 BUD31P41223 144 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms