RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 MYO6Q9UM54 1294 aa6.53□□□□□ -1.36
VCAN-207ENST00000507162 B3GALT5Q9Y2C3 310 aa6.53□□□□□ -1.36
VCAN-207ENST00000507162 MROH6A6NGR9 719 aa6.52□□□□□ -1.37
VCAN-207ENST00000507162 HACD1B0YJ81 288 aa6.52□□□□□ -1.37
VCAN-207ENST00000507162 C17orf105B2RV13 164 aa6.52□□□□□ -1.37
VCAN-207ENST00000507162 GNB5O14775 395 aa6.52□□□□□ -1.37
VCAN-207ENST00000507162 TRIM3O75382 744 aaPredicted RBP6.52□□□□□ -1.37
VCAN-207ENST00000507162 ACTL6AO96019 429 aa6.52□□□□□ -1.37
VCAN-207ENST00000507162 CD8AP01732 235 aa6.52□□□□□ -1.37
VCAN-207ENST00000507162 CD3EP07766 207 aa6.52□□□□□ -1.37
VCAN-207ENST00000507162 THBS1P07996 1170 aa6.52□□□□□ -1.37
VCAN-207ENST00000507162 RBP3P10745 1247 aa6.52□□□□□ -1.37
VCAN-207ENST00000507162 CDH1P12830 882 aa6.52□□□□□ -1.37
VCAN-207ENST00000507162 CPN1P15169 458 aa6.52□□□□□ -1.37
VCAN-207ENST00000507162 CHMP24386 653 aa6.52□□□□□ -1.37
VCAN-207ENST00000507162 SERPINB3P29508 390 aa6.52□□□□□ -1.37
VCAN-207ENST00000507162 MSH2P43246 934 aa6.52□□□□□ -1.37
VCAN-207ENST00000507162 KIR2DL2P43627 348 aaPredicted RBP6.52□□□□□ -1.37
VCAN-207ENST00000507162 BTN3A2P78410 334 aa6.52□□□□□ -1.37
VCAN-207ENST00000507162 RGS1Q08116 209 aa6.52□□□□□ -1.37
VCAN-207ENST00000507162 GGTLC2Q14390 218 aa6.52□□□□□ -1.37
VCAN-207ENST00000507162 ELAVL1Q15717 326 aaKnown RBP6.52□□□□□ -1.37
VCAN-207ENST00000507162 NRF1Q16656 503 aa6.52□□□□□ -1.37
VCAN-207ENST00000507162 MPEG1Q2M385 716 aa6.52□□□□□ -1.37
VCAN-207ENST00000507162 KLHL38Q2WGJ6 581 aa6.52□□□□□ -1.37
VCAN-207ENST00000507162 PGGHGQ32M88 737 aa6.52□□□□□ -1.37
VCAN-207ENST00000507162 KBTBD12Q3ZCT8 623 aa6.52□□□□□ -1.37
VCAN-207ENST00000507162 AWAT1Q58HT5 328 aa6.52□□□□□ -1.37
VCAN-207ENST00000507162 CDKAL1Q5VV42 579 aa6.52□□□□□ -1.37
VCAN-207ENST00000507162 BICRALQ6AI39 1079 aa6.52□□□□□ -1.37
VCAN-207ENST00000507162 AFTPHQ6ULP2 937 aa6.52□□□□□ -1.37
VCAN-207ENST00000507162 SCIMPQ6UWF3 145 aa6.52□□□□□ -1.37
VCAN-207ENST00000507162 ENPP6Q6UWR7 440 aa6.52□□□□□ -1.37
VCAN-207ENST00000507162 CHMP1BQ7LBR1 199 aa6.52□□□□□ -1.37
VCAN-207ENST00000507162 PACS2Q86VP3 889 aa6.52□□□□□ -1.37
VCAN-207ENST00000507162 C17orf64Q86WR6 236 aa6.52□□□□□ -1.37
VCAN-207ENST00000507162 VSIG1Q86XK7 387 aa6.52□□□□□ -1.37
VCAN-207ENST00000507162 GPSM1Q86YR5 675 aa6.52□□□□□ -1.37
VCAN-207ENST00000507162 SCUBE1Q8IWY4 988 aa6.52□□□□□ -1.37
VCAN-207ENST00000507162 ZNF525Q8N782 197 aa6.52□□□□□ -1.37
VCAN-207ENST00000507162 FAM83FQ8NEG4 500 aaPredicted RBP6.52□□□□□ -1.37
VCAN-207ENST00000507162 UTP15Q8TED0 518 aaKnown RBP6.52□□□□□ -1.37
VCAN-207ENST00000507162 PTPMT1Q8WUK0 201 aaPredicted RBP6.52□□□□□ -1.37
VCAN-207ENST00000507162 KAT2AQ92830 837 aa6.52□□□□□ -1.37
VCAN-207ENST00000507162 CAVIN3Q969G5 261 aa6.52□□□□□ -1.37
VCAN-207ENST00000507162 ALOXE3Q9BYJ1 711 aa6.52□□□□□ -1.37
VCAN-207ENST00000507162 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.52□□□□□ -1.37
VCAN-207ENST00000507162 CHMP5Q9NZZ3 219 aa6.52□□□□□ -1.37
VCAN-207ENST00000507162 CNOT11Q9UKZ1 510 aaKnown RBP6.52□□□□□ -1.37
VCAN-207ENST00000507162 SH2B3Q9UQQ2 575 aa6.52□□□□□ -1.37
VCAN-207ENST00000507162 RNF115Q9Y4L5 304 aa6.52□□□□□ -1.37
VCAN-207ENST00000507162 CHCHD2Q9Y6H1 151 aaPredicted RBP6.52□□□□□ -1.37
VCAN-207ENST00000507162 UQCRHLA0A096LP55 91 aa6.51□□□□□ -1.37
VCAN-207ENST00000507162 A0A0A6YYJ9 748 aa6.51□□□□□ -1.37
VCAN-207ENST00000507162 SLCO1B7G3V0H7 640 aa6.51□□□□□ -1.37
VCAN-207ENST00000507162 LINC01387J3KSC0 135 aa6.51□□□□□ -1.37
VCAN-207ENST00000507162 PLOD2O00469 737 aa6.51□□□□□ -1.37
VCAN-207ENST00000507162 PSIP1O75475 530 aaKnown RBP6.51□□□□□ -1.37
VCAN-207ENST00000507162 NDUFS3O75489 264 aa6.51□□□□□ -1.37
VCAN-207ENST00000507162 FTCDO95954 541 aa6.51□□□□□ -1.37
VCAN-207ENST00000507162 CRHP06850 196 aa6.51□□□□□ -1.37
VCAN-207ENST00000507162 FESP07332 822 aa6.51□□□□□ -1.37
VCAN-207ENST00000507162 APEHP13798 732 aaKnown RBP6.51□□□□□ -1.37
VCAN-207ENST00000507162 PPP3CBP16298 524 aa6.51□□□□□ -1.37
VCAN-207ENST00000507162 SAT1P21673 171 aa6.51□□□□□ -1.37
VCAN-207ENST00000507162 PTPN6P29350 595 aa6.51□□□□□ -1.37
VCAN-207ENST00000507162 FMO4P31512 558 aa6.51□□□□□ -1.37
VCAN-207ENST00000507162 CDKN2BP42772 138 aa6.51□□□□□ -1.37
VCAN-207ENST00000507162 SLC6A12P48065 614 aa6.51□□□□□ -1.37
VCAN-207ENST00000507162 HSD17B7P56937 341 aa6.51□□□□□ -1.37
VCAN-207ENST00000507162 PRAMEP78395 509 aa6.51□□□□□ -1.37
VCAN-207ENST00000507162 PCDH1Q08174 1060 aa6.51□□□□□ -1.37
VCAN-207ENST00000507162 PWP1Q13610 501 aa6.51□□□□□ -1.37
VCAN-207ENST00000507162 RUNX2Q13950 521 aa6.51□□□□□ -1.37
VCAN-207ENST00000507162 KCNJ11Q14654 390 aa6.51□□□□□ -1.37
VCAN-207ENST00000507162 RAB35Q15286 201 aa6.51□□□□□ -1.37
VCAN-207ENST00000507162 CYP1B1Q16678 543 aa6.51□□□□□ -1.37
VCAN-207ENST00000507162 ACSBG2Q5FVE4 666 aa6.51□□□□□ -1.37
VCAN-207ENST00000507162 CCDC181Q5TID7 509 aa6.51□□□□□ -1.37
VCAN-207ENST00000507162 ADAM5Q6NVV9 412 aa6.51□□□□□ -1.37
VCAN-207ENST00000507162 SHISA2Q6UWI4 295 aa6.51□□□□□ -1.37
VCAN-207ENST00000507162 SBSNQ6UWP8 590 aa6.51□□□□□ -1.37
VCAN-207ENST00000507162 ZNF534Q76KX8 674 aa6.51□□□□□ -1.37
VCAN-207ENST00000507162 ADGRE4PQ86SQ3 457 aa6.51□□□□□ -1.37
VCAN-207ENST00000507162 PEG10Q86TG7 708 aaKnown RBP6.51□□□□□ -1.37
VCAN-207ENST00000507162 CILP2Q8IUL8 1156 aa6.51□□□□□ -1.37
VCAN-207ENST00000507162 TRIM42Q8IWZ5 723 aa6.51□□□□□ -1.37
VCAN-207ENST00000507162 LRRC56Q8IYG6 542 aaPredicted RBP6.51□□□□□ -1.37
VCAN-207ENST00000507162 FAM47BQ8NA70 645 aa6.51□□□□□ -1.37
VCAN-207ENST00000507162 TMEM52Q8NDY8 209 aa6.51□□□□□ -1.37
VCAN-207ENST00000507162 OR13J1Q8NGT2 312 aa6.51□□□□□ -1.37
VCAN-207ENST00000507162 OR8K3Q8NH51 312 aa6.51□□□□□ -1.37
VCAN-207ENST00000507162 OR14A16Q8NHC5 309 aa6.51□□□□□ -1.37
VCAN-207ENST00000507162 RDH11Q8TC12 318 aa6.51□□□□□ -1.37
VCAN-207ENST00000507162 SLC2A12Q8TD20 617 aa6.51□□□□□ -1.37
VCAN-207ENST00000507162 PROX1Q92786 737 aa6.51□□□□□ -1.37
VCAN-207ENST00000507162 RILPQ96NA2 401 aa6.51□□□□□ -1.37
VCAN-207ENST00000507162 UCN2Q96RP3 112 aa6.51□□□□□ -1.37
VCAN-207ENST00000507162 TACO1Q9BSH4 297 aaKnown RBP6.51□□□□□ -1.37
VCAN-207ENST00000507162 TRAF4Q9BUZ4 470 aaPredicted RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms