RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 USH1CQ9Y6N9 552 aa9.44□□□□□ -0.9
NUP54-203ENST00000504173 RP1L1Q8IWN7 2480 aaPredicted RBP9.44□□□□□ -0.9
NUP54-203ENST00000504173 WIPF3A6NGB9 483 aa9.43□□□□□ -0.9
NUP54-203ENST00000504173 ZNF891A8MT65 544 aaPredicted RBP9.43□□□□□ -0.9
NUP54-203ENST00000504173 FAM227AF5H4B4 570 aa9.43□□□□□ -0.9
NUP54-203ENST00000504173 CLDN4O14493 209 aa9.43□□□□□ -0.9
NUP54-203ENST00000504173 SDHDO14521 159 aa9.43□□□□□ -0.9
NUP54-203ENST00000504173 POLR3GO15318 223 aaPredicted RBP9.43□□□□□ -0.9
NUP54-203ENST00000504173 EDF1O60869 148 aaKnown RBP9.43□□□□□ -0.9
NUP54-203ENST00000504173 DIAPH2O60879 1101 aa9.43□□□□□ -0.9
NUP54-203ENST00000504173 GUCY1B2O75343 617 aa9.43□□□□□ -0.9
NUP54-203ENST00000504173 KLF7O75840 302 aaPredicted RBP9.43□□□□□ -0.9
NUP54-203ENST00000504173 ANXA4P09525 319 aaPredicted RBP9.43□□□□□ -0.9
NUP54-203ENST00000504173 NR2F6P10588 404 aa9.43□□□□□ -0.9
NUP54-203ENST00000504173 MAPK1P28482 360 aa9.43□□□□□ -0.9
NUP54-203ENST00000504173 EMP2P54851 167 aa9.43□□□□□ -0.9
NUP54-203ENST00000504173 TRA2BP62995 288 aaKnown RBP9.43□□□□□ -0.9
NUP54-203ENST00000504173 KIAA0040Q15053 153 aa9.43□□□□□ -0.9
NUP54-203ENST00000504173 RFTN2Q52LD8 501 aaPredicted RBP9.43□□□□□ -0.9
NUP54-203ENST00000504173 C6orf136Q5SQH8 315 aa9.43□□□□□ -0.9
NUP54-203ENST00000504173 FHL5Q5TD97 284 aa9.43□□□□□ -0.9
NUP54-203ENST00000504173 VWA5B1Q5TIE3 1220 aa9.43□□□□□ -0.9
NUP54-203ENST00000504173 C1QL3Q5VWW1 255 aa9.43□□□□□ -0.9
NUP54-203ENST00000504173 NOXRED1Q6NXP6 359 aa9.43□□□□□ -0.9
NUP54-203ENST00000504173 GALNT18Q6P9A2 607 aa9.43□□□□□ -0.9
NUP54-203ENST00000504173 LAPTM4BQ86VI4 370 aa9.43□□□□□ -0.9
NUP54-203ENST00000504173 FNDC5Q8NAU1 212 aa9.43□□□□□ -0.9
NUP54-203ENST00000504173 C11orf24Q96F05 449 aaPredicted RBP9.43□□□□□ -0.9
NUP54-203ENST00000504173 SLC45A3Q96JT2 553 aa9.43□□□□□ -0.9
NUP54-203ENST00000504173 FAIM2Q9BWQ8 316 aa9.43□□□□□ -0.9
NUP54-203ENST00000504173 VN1R1Q9GZP7 353 aa9.43□□□□□ -0.9
NUP54-203ENST00000504173 AKTIPQ9H8T0 292 aa9.43□□□□□ -0.9
NUP54-203ENST00000504173 WDR41Q9HAD4 459 aa9.43□□□□□ -0.9
NUP54-203ENST00000504173 PRTFDC1Q9NRG1 225 aa9.43□□□□□ -0.9
NUP54-203ENST00000504173 LANCL2Q9NS86 450 aa9.43□□□□□ -0.9
NUP54-203ENST00000504173 SEMA3GQ9NS98 782 aa9.43□□□□□ -0.9
NUP54-203ENST00000504173 TEX10Q9NXF1 929 aaPredicted RBP9.43□□□□□ -0.9
NUP54-203ENST00000504173 KCMF1Q9P0J7 381 aa9.43□□□□□ -0.9
NUP54-203ENST00000504173 C3orf18Q9UK00 162 aa9.43□□□□□ -0.9
NUP54-203ENST00000504173 ATG4BQ9Y4P1 393 aa9.43□□□□□ -0.9
NUP54-203ENST00000504173 NIPBLQ6KC79 2804 aaeCLIP9.43□□□□□ -0.9
NUP54-203ENST00000504173 GOLGA8QA0A0J9YX86 632 aa9.42□□□□□ -0.9
NUP54-203ENST00000504173 A0A1W2PR48 441 aa9.42□□□□□ -0.9
NUP54-203ENST00000504173 GOLGA8OA6NCC3 632 aa9.42□□□□□ -0.9
NUP54-203ENST00000504173 OR2W5A6NFC9 320 aa9.42□□□□□ -0.9
NUP54-203ENST00000504173 IDSB3KWA1 339 aa9.42□□□□□ -0.9
NUP54-203ENST00000504173 GOLGA8NF8WBI6 632 aa9.42□□□□□ -0.9
NUP54-203ENST00000504173 CYR61O00622 381 aa9.42□□□□□ -0.9
NUP54-203ENST00000504173 ZNF195O14628 629 aa9.42□□□□□ -0.9
NUP54-203ENST00000504173 PROM1O43490 865 aa9.42□□□□□ -0.9
NUP54-203ENST00000504173 PRMT3O60678 531 aa9.42□□□□□ -0.9
NUP54-203ENST00000504173 PRKRAO75569 313 aaKnown RBP9.42□□□□□ -0.9
NUP54-203ENST00000504173 CREG1O75629 220 aa9.42□□□□□ -0.9
NUP54-203ENST00000504173 TGDSO95455 350 aa9.42□□□□□ -0.9
NUP54-203ENST00000504173 AIFM1O95831 613 aa9.42□□□□□ -0.9
NUP54-203ENST00000504173 IGHEP01854 428 aa9.42□□□□□ -0.9
NUP54-203ENST00000504173 UMODP07911 640 aa9.42□□□□□ -0.9
NUP54-203ENST00000504173 CYC1P08574 325 aa9.42□□□□□ -0.9
NUP54-203ENST00000504173 PRR35P0CG20 571 aa9.42□□□□□ -0.9
NUP54-203ENST00000504173 LBPP18428 481 aa9.42□□□□□ -0.9
NUP54-203ENST00000504173 WT1P19544 449 aaPredicted RBP9.42□□□□□ -0.9
NUP54-203ENST00000504173 EPHA3P29320 983 aa9.42□□□□□ -0.9
NUP54-203ENST00000504173 OTX2P32243 289 aa9.42□□□□□ -0.9
NUP54-203ENST00000504173 GSTM5P46439 218 aa9.42□□□□□ -0.9
NUP54-203ENST00000504173 ALDH9A1P49189 494 aa9.42□□□□□ -0.9
NUP54-203ENST00000504173 GYS2P54840 703 aa9.42□□□□□ -0.9
NUP54-203ENST00000504173 TAS2R50P59544 299 aa9.42□□□□□ -0.9
NUP54-203ENST00000504173 MC1RQ01726 317 aa9.42□□□□□ -0.9
NUP54-203ENST00000504173 ZNF763Q0D2J5 394 aa9.42□□□□□ -0.9
NUP54-203ENST00000504173 SLC13A2Q13183 592 aa9.42□□□□□ -0.9
NUP54-203ENST00000504173 MAD2L1Q13257 205 aaPredicted RBP9.42□□□□□ -0.9
NUP54-203ENST00000504173 SSPNQ14714 243 aa9.42□□□□□ -0.9
NUP54-203ENST00000504173 SLC9B1Q4ZJI4 515 aa9.42□□□□□ -0.9
NUP54-203ENST00000504173 NDUFAF5Q5TEU4 345 aa9.42□□□□□ -0.9
NUP54-203ENST00000504173 C18orf63Q68DL7 685 aa9.42□□□□□ -0.9
NUP54-203ENST00000504173 NXNQ6DKJ4 435 aa9.42□□□□□ -0.9
NUP54-203ENST00000504173 FAAH2Q6GMR7 532 aa9.42□□□□□ -0.9
NUP54-203ENST00000504173 MAMDC2Q7Z304 686 aaPredicted RBP9.42□□□□□ -0.9
NUP54-203ENST00000504173 MAVSQ7Z434 540 aa9.42□□□□□ -0.9
NUP54-203ENST00000504173 RAB43Q86YS6 212 aa9.42□□□□□ -0.9
NUP54-203ENST00000504173 TMEM151BQ8IW70 566 aa9.42□□□□□ -0.9
NUP54-203ENST00000504173 ZNF595Q8IYB9 648 aa9.42□□□□□ -0.9
NUP54-203ENST00000504173 ZSCAN1Q8NBB4 408 aa9.42□□□□□ -0.9
NUP54-203ENST00000504173 TMEM52Q8NDY8 209 aa9.42□□□□□ -0.9
NUP54-203ENST00000504173 C16orf78Q8WTQ4 265 aa9.42□□□□□ -0.9
NUP54-203ENST00000504173 METTL21AQ8WXB1 218 aa9.42□□□□□ -0.9
NUP54-203ENST00000504173 TM4SF18Q96CE8 201 aa9.42□□□□□ -0.9
NUP54-203ENST00000504173 THOC1Q96FV9 657 aaKnown RBP9.42□□□□□ -0.9
NUP54-203ENST00000504173 FCRL1Q96LA6 429 aa9.42□□□□□ -0.9
NUP54-203ENST00000504173 PTCHD1Q96NR3 888 aa9.42□□□□□ -0.9
NUP54-203ENST00000504173 C1orf50Q9BV19 199 aa9.42□□□□□ -0.9
NUP54-203ENST00000504173 TRIM55Q9BYV6 548 aa9.42□□□□□ -0.9
NUP54-203ENST00000504173 WDR55Q9H6Y2 383 aaPredicted RBP9.42□□□□□ -0.9
NUP54-203ENST00000504173 RPF2Q9H7B2 306 aaKnown RBP9.42□□□□□ -0.9
NUP54-203ENST00000504173 NPHS2Q9NP85 383 aa9.42□□□□□ -0.9
NUP54-203ENST00000504173 MYNNQ9NPC7 610 aa9.42□□□□□ -0.9
NUP54-203ENST00000504173 PRDM9Q9NQV7 894 aa9.42□□□□□ -0.9
NUP54-203ENST00000504173 FGFR1OP2Q9NVK5 253 aa9.42□□□□□ -0.9
NUP54-203ENST00000504173 FAM53CQ9NYF3 392 aa9.42□□□□□ -0.9
NUP54-203ENST00000504173 EIF3LQ9Y262 564 aaKnown RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms