RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 CHERPQ8IWX8 916 aaKnown RBP5.59□□□□□ -1.51
BRCA1-224ENST00000497488 LGI2Q8N0V4 545 aa5.59□□□□□ -1.51
BRCA1-224ENST00000497488 TMEM99Q8N816 258 aa5.59□□□□□ -1.51
BRCA1-224ENST00000497488 SPATA4Q8NEY3 305 aa5.59□□□□□ -1.51
BRCA1-224ENST00000497488 BBS1Q8NFJ9 593 aa5.59□□□□□ -1.51
BRCA1-224ENST00000497488 OR4L1Q8NH43 312 aa5.59□□□□□ -1.51
BRCA1-224ENST00000497488 OSR1Q8TAX0 266 aaPredicted RBP5.59□□□□□ -1.51
BRCA1-224ENST00000497488 WFIKKN2Q8TEU8 576 aa5.59□□□□□ -1.51
BRCA1-224ENST00000497488 HIST1H2ACQ93077 130 aa5.59□□□□□ -1.51
BRCA1-224ENST00000497488 MCUR1Q96AQ8 359 aa5.59□□□□□ -1.51
BRCA1-224ENST00000497488 IGSF21Q96ID5 467 aa5.59□□□□□ -1.51
BRCA1-224ENST00000497488 CXorf58Q96LI9 332 aa5.59□□□□□ -1.51
BRCA1-224ENST00000497488 CCNL2Q96S94 520 aaPredicted RBP5.59□□□□□ -1.51
BRCA1-224ENST00000497488 FUNDC2Q9BWH2 189 aa5.59□□□□□ -1.51
BRCA1-224ENST00000497488 MRPL37Q9BZE1 423 aaKnown RBP5.59□□□□□ -1.51
BRCA1-224ENST00000497488 IQCGQ9H095 443 aaKnown RBP5.59□□□□□ -1.51
BRCA1-224ENST00000497488 SDCBP2Q9H190 292 aa5.59□□□□□ -1.51
BRCA1-224ENST00000497488 GLT8D2Q9H1C3 349 aa5.59□□□□□ -1.51
BRCA1-224ENST00000497488 ARRDC1-AS1Q9H2J1 176 aa5.59□□□□□ -1.51
BRCA1-224ENST00000497488 CD320Q9NPF0 282 aa5.59□□□□□ -1.51
BRCA1-224ENST00000497488 PDGFCQ9NRA1 345 aa5.59□□□□□ -1.51
BRCA1-224ENST00000497488 ADAM21Q9UKJ8 722 aa5.59□□□□□ -1.51
BRCA1-224ENST00000497488 FZD10Q9ULW2 581 aa5.59□□□□□ -1.51
BRCA1-224ENST00000497488 NSG2Q9Y328 171 aa5.59□□□□□ -1.51
BRCA1-224ENST00000497488 LRP12Q9Y561 859 aa5.59□□□□□ -1.51
BRCA1-224ENST00000497488 PHLPP1O60346 1717 aa5.59□□□□□ -1.51
BRCA1-224ENST00000497488 MAP3K19Q56UN5 1328 aa5.58□□□□□ -1.52
BRCA1-224ENST00000497488 RNF123Q5XPI4 1314 aa5.58□□□□□ -1.52
BRCA1-224ENST00000497488 TRBV5-3A0A0A0MS03 114 aa5.58□□□□□ -1.52
BRCA1-224ENST00000497488 METTL21EPA6NDL7 271 aa5.58□□□□□ -1.52
BRCA1-224ENST00000497488 BTBD17A6NE02 478 aa5.58□□□□□ -1.52
BRCA1-224ENST00000497488 ZNF879B4DU55 563 aa5.58□□□□□ -1.52
BRCA1-224ENST00000497488 E9PMD0 336 aa5.58□□□□□ -1.52
BRCA1-224ENST00000497488 SGK494L7N484 410 aa5.58□□□□□ -1.52
BRCA1-224ENST00000497488 GAPDHSO14556 408 aaPredicted RBP5.58□□□□□ -1.52
BRCA1-224ENST00000497488 ARPC2O15144 300 aa5.58□□□□□ -1.52
BRCA1-224ENST00000497488 AKR7A2O43488 359 aa5.58□□□□□ -1.52
BRCA1-224ENST00000497488 LDB2O43679 373 aa5.58□□□□□ -1.52
BRCA1-224ENST00000497488 ZNF623O75123 536 aa5.58□□□□□ -1.52
BRCA1-224ENST00000497488 CDH16O75309 829 aa5.58□□□□□ -1.52
BRCA1-224ENST00000497488 SERPINI2O75830 405 aa5.58□□□□□ -1.52
BRCA1-224ENST00000497488 NDUFA7O95182 113 aa5.58□□□□□ -1.52
BRCA1-224ENST00000497488 LGI1O95970 557 aa5.58□□□□□ -1.52
BRCA1-224ENST00000497488 ERVK-10P10266 1014 aa5.58□□□□□ -1.52
BRCA1-224ENST00000497488 ACP2P11117 423 aa5.58□□□□□ -1.52
BRCA1-224ENST00000497488 DBTP11182 482 aaKnown RBP5.58□□□□□ -1.52
BRCA1-224ENST00000497488 CPN1P15169 458 aa5.58□□□□□ -1.52
BRCA1-224ENST00000497488 JUNBP17275 347 aaPredicted RBP5.58□□□□□ -1.52
BRCA1-224ENST00000497488 BMP7P18075 431 aa5.58□□□□□ -1.52
BRCA1-224ENST00000497488 PRKACBP22694 351 aa5.58□□□□□ -1.52
BRCA1-224ENST00000497488 GJB2P29033 226 aa5.58□□□□□ -1.52
BRCA1-224ENST00000497488 OR3A3P47888 321 aa5.58□□□□□ -1.52
BRCA1-224ENST00000497488 CLDN8P56748 225 aa5.58□□□□□ -1.52
BRCA1-224ENST00000497488 BNC1Q01954 994 aa5.58□□□□□ -1.52
BRCA1-224ENST00000497488 GABPAQ06546 454 aa5.58□□□□□ -1.52
BRCA1-224ENST00000497488 KLC1Q07866 573 aa5.58□□□□□ -1.52
BRCA1-224ENST00000497488 PJVKQ0ZLH3 352 aa5.58□□□□□ -1.52
BRCA1-224ENST00000497488 TRDNQ13061 729 aa5.58□□□□□ -1.52
BRCA1-224ENST00000497488 ELAVL3Q14576 367 aaKnown RBP5.58□□□□□ -1.52
BRCA1-224ENST00000497488 EXOSC7Q15024 291 aaKnown RBP5.58□□□□□ -1.52
BRCA1-224ENST00000497488 SPHARQ15513 63 aa5.58□□□□□ -1.52
BRCA1-224ENST00000497488 NKAIN1Q4KMZ8 207 aa5.58□□□□□ -1.52
BRCA1-224ENST00000497488 ZNF542PQ5EBM4 170 aa5.58□□□□□ -1.52
BRCA1-224ENST00000497488 SPDYCQ5MJ68 293 aa5.58□□□□□ -1.52
BRCA1-224ENST00000497488 CCDC122Q5T0U0 273 aa5.58□□□□□ -1.52
BRCA1-224ENST00000497488 LIPJQ5W064 366 aa5.58□□□□□ -1.52
BRCA1-224ENST00000497488 TRIM65Q6PJ69 517 aa5.58□□□□□ -1.52
BRCA1-224ENST00000497488 CENPUQ71F23 418 aa5.58□□□□□ -1.52
BRCA1-224ENST00000497488 LIMS2Q7Z4I7 341 aa5.58□□□□□ -1.52
BRCA1-224ENST00000497488 SLC22A16Q86VW1 577 aa5.58□□□□□ -1.52
BRCA1-224ENST00000497488 PALB2Q86YC2 1186 aa5.58□□□□□ -1.52
BRCA1-224ENST00000497488 C1orf210Q8IVY1 113 aa5.58□□□□□ -1.52
BRCA1-224ENST00000497488 KATNAL2Q8IYT4 538 aa5.58□□□□□ -1.52
BRCA1-224ENST00000497488 RDM1Q8NG50 284 aa5.58□□□□□ -1.52
BRCA1-224ENST00000497488 SPRYD4Q8WW59 207 aaPredicted RBP5.58□□□□□ -1.52
BRCA1-224ENST00000497488 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.58□□□□□ -1.52
BRCA1-224ENST00000497488 IRGQQ8WZA9 623 aa5.58□□□□□ -1.52
BRCA1-224ENST00000497488 ANP32BQ92688 251 aaKnown RBP5.58□□□□□ -1.52
BRCA1-224ENST00000497488 P3H4Q92791 437 aa5.58□□□□□ -1.52
BRCA1-224ENST00000497488 RBM41Q96IZ5 413 aaKnown RBP5.58□□□□□ -1.52
BRCA1-224ENST00000497488 SGK494Q96LW2 274 aa5.58□□□□□ -1.52
BRCA1-224ENST00000497488 VSTM2LQ96N03 204 aa5.58□□□□□ -1.52
BRCA1-224ENST00000497488 MAP3K3Q99759 626 aa5.58□□□□□ -1.52
BRCA1-224ENST00000497488 TUBA1CQ9BQE3 449 aa5.58□□□□□ -1.52
BRCA1-224ENST00000497488 BPIFA3Q9BQP9 254 aa5.58□□□□□ -1.52
BRCA1-224ENST00000497488 CHRDL1Q9BU40 450 aa5.58□□□□□ -1.52
BRCA1-224ENST00000497488 POLDIP3Q9BY77 421 aaKnown RBP5.58□□□□□ -1.52
BRCA1-224ENST00000497488 ROPN1BQ9BZX4 212 aaPredicted RBP5.58□□□□□ -1.52
BRCA1-224ENST00000497488 TDRD3Q9H7E2 651 aaKnown RBP5.58□□□□□ -1.52
BRCA1-224ENST00000497488 MAP6D1Q9H9H5 199 aa5.58□□□□□ -1.52
BRCA1-224ENST00000497488 ELOVL3Q9HB03 270 aa5.58□□□□□ -1.52
BRCA1-224ENST00000497488 AGPAT3Q9NRZ7 376 aa5.58□□□□□ -1.52
BRCA1-224ENST00000497488 THSD1Q9NS62 852 aa5.58□□□□□ -1.52
BRCA1-224ENST00000497488 ZNF701Q9NV72 531 aaPredicted RBP5.58□□□□□ -1.52
BRCA1-224ENST00000497488 LHX3Q9UBR4 397 aa5.58□□□□□ -1.52
BRCA1-224ENST00000497488 DAPK2Q9UIK4 370 aa5.58□□□□□ -1.52
BRCA1-224ENST00000497488 PAM16Q9Y3D7 125 aa5.58□□□□□ -1.52
BRCA1-224ENST00000497488 LRP6O75581 1613 aa5.58□□□□□ -1.52
BRCA1-224ENST00000497488 NHSL1Q5SYE7 1610 aa5.58□□□□□ -1.52
BRCA1-224ENST00000497488 DLC1Q96QB1 1528 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms