RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 TICAM1Q8IUC6 712 aa18.55■□□□□ 0.56
SCAMP3-209ENST00000497470 METTL27Q8N6F8 245 aaPredicted RBP18.55■□□□□ 0.56
SCAMP3-209ENST00000497470 ZNF248Q8NDW4 579 aa18.55■□□□□ 0.56
SCAMP3-209ENST00000497470 VPS37AQ8NEZ2 397 aa18.55■□□□□ 0.56
SCAMP3-209ENST00000497470 DNAJB8Q8NHS0 232 aa18.55■□□□□ 0.56
SCAMP3-209ENST00000497470 CT55Q8WUE5 264 aa18.55■□□□□ 0.56
SCAMP3-209ENST00000497470 KIAA1143Q96AT1 154 aaPredicted RBP18.55■□□□□ 0.56
SCAMP3-209ENST00000497470 ANKRD9Q96BM1 317 aaPredicted RBP18.55■□□□□ 0.56
SCAMP3-209ENST00000497470 ZNF681Q96N22 645 aa18.55■□□□□ 0.56
SCAMP3-209ENST00000497470 LRRC37BQ96QE4 947 aa18.55■□□□□ 0.56
SCAMP3-209ENST00000497470 CSF3RQ99062 836 aa18.55■□□□□ 0.56
SCAMP3-209ENST00000497470 VN1R1Q9GZP7 353 aa18.55■□□□□ 0.56
SCAMP3-209ENST00000497470 RYDENQ9NUL5 291 aaKnown RBP18.55■□□□□ 0.56
SCAMP3-209ENST00000497470 FAM120CQ9NX05 1096 aaKnown RBP18.55■□□□□ 0.56
SCAMP3-209ENST00000497470 C19orf25Q9UFG5 118 aaPredicted RBP18.55■□□□□ 0.56
SCAMP3-209ENST00000497470 TCFL5Q9UL49 500 aa18.55■□□□□ 0.56
SCAMP3-209ENST00000497470 ZNF780BQ9Y6R6 833 aa18.55■□□□□ 0.56
SCAMP3-209ENST00000497470 CACNA1AO00555 2505 aa18.55■□□□□ 0.56
SCAMP3-209ENST00000497470 LOC102723996A0A087X1L8 192 aa18.54■□□□□ 0.56
SCAMP3-209ENST00000497470 TCRBV16S1A1N1A0A5B0 115 aa18.54■□□□□ 0.56
SCAMP3-209ENST00000497470 MYO1GB0I1T2 1018 aa18.54■□□□□ 0.56
SCAMP3-209ENST00000497470 IDSB3KWA1 339 aa18.54■□□□□ 0.56
SCAMP3-209ENST00000497470 RNASET2O00584 256 aaKnown RBP18.54■□□□□ 0.56
SCAMP3-209ENST00000497470 PGRMC2O15173 223 aa18.54■□□□□ 0.56
SCAMP3-209ENST00000497470 CNOT3O75175 753 aaKnown RBP18.54■□□□□ 0.56
SCAMP3-209ENST00000497470 ATP1B1P05026 303 aa18.54■□□□□ 0.56
SCAMP3-209ENST00000497470 PRDX6P30041 224 aa18.54■□□□□ 0.56
SCAMP3-209ENST00000497470 MPIP34949 423 aa18.54■□□□□ 0.56
SCAMP3-209ENST00000497470 KIR3DL1P43629 444 aa18.54■□□□□ 0.56
SCAMP3-209ENST00000497470 EMP2P54851 167 aa18.54■□□□□ 0.56
SCAMP3-209ENST00000497470 UFM1P61960 85 aa18.54■□□□□ 0.56
SCAMP3-209ENST00000497470 ST13P4Q8IZP2 240 aaPredicted RBP18.54■□□□□ 0.56
SCAMP3-209ENST00000497470 PSMA8Q8TAA3 256 aa18.54■□□□□ 0.56
SCAMP3-209ENST00000497470 ZBED6CLQ96FA7 236 aaPredicted RBP18.54■□□□□ 0.56
SCAMP3-209ENST00000497470 YIPF2Q9BWQ6 316 aa18.54■□□□□ 0.56
SCAMP3-209ENST00000497470 NMUR2Q9GZQ4 415 aa18.54■□□□□ 0.56
SCAMP3-209ENST00000497470 CROTQ9UKG9 612 aa18.54■□□□□ 0.56
SCAMP3-209ENST00000497470 UTS2RQ9UKP6 389 aa18.54■□□□□ 0.56
SCAMP3-209ENST00000497470 NUP210LQ5VU65 1888 aa18.54■□□□□ 0.56
SCAMP3-209ENST00000497470 PRSS51A0A1B0GVH4 220 aa18.53■□□□□ 0.56
SCAMP3-209ENST00000497470 FAM227AF5H4B4 570 aa18.53■□□□□ 0.56
SCAMP3-209ENST00000497470 FCHO1O14526 889 aa18.53■□□□□ 0.56
SCAMP3-209ENST00000497470 PGRP06401 933 aa18.53■□□□□ 0.56
SCAMP3-209ENST00000497470 HEXBP07686 556 aa18.53■□□□□ 0.56
SCAMP3-209ENST00000497470 COX7A2P14406 83 aa18.53■□□□□ 0.56
SCAMP3-209ENST00000497470 PORP16435 677 aaPredicted RBP18.53■□□□□ 0.56
SCAMP3-209ENST00000497470 MMP11P24347 488 aa18.53■□□□□ 0.56
SCAMP3-209ENST00000497470 S100A3P33764 101 aa18.53■□□□□ 0.56
SCAMP3-209ENST00000497470 FOLR3P41439 243 aa18.53■□□□□ 0.56
SCAMP3-209ENST00000497470 ZFP36L2P47974 494 aaKnown RBP18.53■□□□□ 0.56
SCAMP3-209ENST00000497470 POLR2JP52435 117 aaKnown RBP18.53■□□□□ 0.56
SCAMP3-209ENST00000497470 MC1RQ01726 317 aa18.53■□□□□ 0.56
SCAMP3-209ENST00000497470 SLC13A2Q13183 592 aa18.53■□□□□ 0.56
SCAMP3-209ENST00000497470 FAM199XQ6PEV8 388 aaPredicted RBP18.53■□□□□ 0.56
SCAMP3-209ENST00000497470 MTDHQ86UE4 582 aaKnown RBP18.53■□□□□ 0.56
SCAMP3-209ENST00000497470 FUNDC1Q8IVP5 155 aa18.53■□□□□ 0.56
SCAMP3-209ENST00000497470 IL22RA1Q8N6P7 574 aa18.53■□□□□ 0.56
SCAMP3-209ENST00000497470 ENDOVQ8N8Q3 282 aaKnown RBP18.53■□□□□ 0.56
SCAMP3-209ENST00000497470 TMEM52Q8NDY8 209 aa18.53■□□□□ 0.56
SCAMP3-209ENST00000497470 ZFP28Q8NHY6 868 aa18.53■□□□□ 0.56
SCAMP3-209ENST00000497470 METTL21AQ8WXB1 218 aa18.53■□□□□ 0.56
SCAMP3-209ENST00000497470 GATA6Q92908 595 aa18.53■□□□□ 0.56
SCAMP3-209ENST00000497470 DUSP26Q9BV47 211 aa18.53■□□□□ 0.56
SCAMP3-209ENST00000497470 MKL2Q9ULH7 1088 aa18.53■□□□□ 0.56
SCAMP3-209ENST00000497470 ENTPD4Q9Y227 616 aa18.53■□□□□ 0.56
SCAMP3-209ENST00000497470 CAPN7Q9Y6W3 813 aa18.53■□□□□ 0.56
SCAMP3-209ENST00000497470 TEX51A0A1B0GUA7 166 aa18.52■□□□□ 0.56
SCAMP3-209ENST00000497470 CFLARO15519 480 aa18.52■□□□□ 0.56
SCAMP3-209ENST00000497470 B4GALT2O60909 372 aa18.52■□□□□ 0.56
SCAMP3-209ENST00000497470 SCN2BO60939 215 aa18.52■□□□□ 0.56
SCAMP3-209ENST00000497470 ALOX12BO75342 701 aa18.52■□□□□ 0.56
SCAMP3-209ENST00000497470 CAPNS1P04632 268 aa18.52■□□□□ 0.56
SCAMP3-209ENST00000497470 CPMP14384 443 aa18.52■□□□□ 0.56
SCAMP3-209ENST00000497470 NTSP30990 170 aa18.52■□□□□ 0.56
SCAMP3-209ENST00000497470 DLSTP36957 453 aa18.52■□□□□ 0.56
SCAMP3-209ENST00000497470 STT3AP46977 705 aa18.52■□□□□ 0.56
SCAMP3-209ENST00000497470 XKP51811 444 aa18.52■□□□□ 0.56
SCAMP3-209ENST00000497470 PLIN5Q00G26 463 aa18.52■□□□□ 0.56
SCAMP3-209ENST00000497470 FOLH1Q04609 750 aa18.52■□□□□ 0.56
SCAMP3-209ENST00000497470 STX4Q12846 297 aa18.52■□□□□ 0.56
SCAMP3-209ENST00000497470 KLF10Q13118 480 aa18.52■□□□□ 0.56
SCAMP3-209ENST00000497470 KRTCAP2Q8N6L1 136 aa18.52■□□□□ 0.56
SCAMP3-209ENST00000497470 RP9Q8TA86 221 aaKnown RBP18.52■□□□□ 0.56
SCAMP3-209ENST00000497470 ZNF675Q8TD23 568 aa18.52■□□□□ 0.56
SCAMP3-209ENST00000497470 KLHL29Q96CT2 875 aa18.52■□□□□ 0.56
SCAMP3-209ENST00000497470 CNRIP1Q96F85 164 aaPredicted RBP18.52■□□□□ 0.56
SCAMP3-209ENST00000497470 SLC45A3Q96JT2 553 aa18.52■□□□□ 0.56
SCAMP3-209ENST00000497470 TEX37Q96LM6 180 aa18.52■□□□□ 0.56
SCAMP3-209ENST00000497470 PTCHD1Q96NR3 888 aa18.52■□□□□ 0.56
SCAMP3-209ENST00000497470 CRB3Q9BUF7 120 aa18.52■□□□□ 0.56
SCAMP3-209ENST00000497470 SLC25A23Q9BV35 468 aa18.52■□□□□ 0.56
SCAMP3-209ENST00000497470 CCDC106Q9BWC9 280 aa18.52■□□□□ 0.56
SCAMP3-209ENST00000497470 TMEM121BQ9BXQ6 578 aaPredicted RBP18.52■□□□□ 0.56
SCAMP3-209ENST00000497470 NEUROD4Q9HD90 331 aa18.52■□□□□ 0.56
SCAMP3-209ENST00000497470 ADAP2Q9NPF8 381 aa18.52■□□□□ 0.56
SCAMP3-209ENST00000497470 SLC52A3Q9NQ40 469 aa18.52■□□□□ 0.56
SCAMP3-209ENST00000497470 SH3BP4Q9P0V3 963 aa18.52■□□□□ 0.56
SCAMP3-209ENST00000497470 BTNL2Q9UIR0 455 aa18.52■□□□□ 0.56
SCAMP3-209ENST00000497470 C3orf18Q9UK00 162 aa18.52■□□□□ 0.56
SCAMP3-209ENST00000497470 PPIEQ9UNP9 301 aaKnown RBP18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms