RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 SYT14Q8NB59 555 aa12.81□□□□□ -0.36
GPC1-209ENST00000495100 LRR1Q96L50 414 aa12.81□□□□□ -0.36
GPC1-209ENST00000495100 AIF1LQ9BQI0 150 aa12.81□□□□□ -0.36
GPC1-209ENST00000495100 CCNB1IP1Q9NPC3 277 aa12.81□□□□□ -0.36
GPC1-209ENST00000495100 C8orf4Q9NR00 106 aa12.81□□□□□ -0.36
GPC1-209ENST00000495100 NKIRAS2Q9NYR9 191 aa12.81□□□□□ -0.36
GPC1-209ENST00000495100 TMED5Q9Y3A6 229 aa12.81□□□□□ -0.36
GPC1-209ENST00000495100 C2orf92A0A1B0GVN3 265 aa12.81□□□□□ -0.36
GPC1-209ENST00000495100 SPNP16150 400 aa12.81□□□□□ -0.36
GPC1-209ENST00000495100 CBLP22681 906 aa12.81□□□□□ -0.36
GPC1-209ENST00000495100 TCEA1P23193 301 aaKnown RBP12.81□□□□□ -0.36
GPC1-209ENST00000495100 PSMA1P25786 263 aaKnown RBP12.81□□□□□ -0.36
GPC1-209ENST00000495100 CD40LGP29965 261 aa12.81□□□□□ -0.36
GPC1-209ENST00000495100 GPR19Q15760 415 aa12.81□□□□□ -0.36
GPC1-209ENST00000495100 KDM4DQ6B0I6 523 aa12.81□□□□□ -0.36
GPC1-209ENST00000495100 SLC30A6Q6NXT4 461 aa12.81□□□□□ -0.36
GPC1-209ENST00000495100 KRT74Q7RTS7 529 aa12.81□□□□□ -0.36
GPC1-209ENST00000495100 DEPDC4Q8N2C3 294 aa12.81□□□□□ -0.36
GPC1-209ENST00000495100 EGLN3Q9H6Z9 239 aa12.81□□□□□ -0.36
GPC1-209ENST00000495100 RC3H2Q9HBD1 1191 aaKnown RBP12.81□□□□□ -0.36
GPC1-209ENST00000495100 GULP1Q9UBP9 304 aa12.81□□□□□ -0.36
GPC1-209ENST00000495100 AP3D1O14617 1153 aa12.8□□□□□ -0.36
GPC1-209ENST00000495100 HPRP00739 348 aa12.8□□□□□ -0.36
GPC1-209ENST00000495100 PORP16435 677 aaPredicted RBP12.8□□□□□ -0.36
GPC1-209ENST00000495100 ITGA2P17301 1181 aa12.8□□□□□ -0.36
GPC1-209ENST00000495100 CHMP24386 653 aa12.8□□□□□ -0.36
GPC1-209ENST00000495100 CCR4P51679 360 aa12.8□□□□□ -0.36
GPC1-209ENST00000495100 KCNJ10P78508 379 aa12.8□□□□□ -0.36
GPC1-209ENST00000495100 GSTM4Q03013 218 aa12.8□□□□□ -0.36
GPC1-209ENST00000495100 HNRNPA0Q13151 305 aaKnown RBP12.8□□□□□ -0.36
GPC1-209ENST00000495100 IL18R1Q13478 541 aa12.8□□□□□ -0.36
GPC1-209ENST00000495100 NCF4Q15080 339 aa12.8□□□□□ -0.36
GPC1-209ENST00000495100 TEAD4Q15561 434 aa12.8□□□□□ -0.36
GPC1-209ENST00000495100 ZNF791Q3KP31 576 aaPredicted RBP12.8□□□□□ -0.36
GPC1-209ENST00000495100 GTF2IRD2BQ6EKJ0 949 aa12.8□□□□□ -0.36
GPC1-209ENST00000495100 KIAA1324Q6UXG2 1013 aaKnown RBP12.8□□□□□ -0.36
GPC1-209ENST00000495100 SLCO4C1Q6ZQN7 724 aa12.8□□□□□ -0.36
GPC1-209ENST00000495100 GTF2IRD2Q86UP8 949 aa12.8□□□□□ -0.36
GPC1-209ENST00000495100 ANKRD13BQ86YJ7 626 aa12.8□□□□□ -0.36
GPC1-209ENST00000495100 KBTBD8Q8NFY9 601 aa12.8□□□□□ -0.36
GPC1-209ENST00000495100 S100ZQ8WXG8 99 aa12.8□□□□□ -0.36
GPC1-209ENST00000495100 KXD1Q9BQD3 176 aa12.8□□□□□ -0.36
GPC1-209ENST00000495100 WFDC6Q9BQY6 131 aa12.8□□□□□ -0.36
GPC1-209ENST00000495100 RACGAP1Q9H0H5 632 aa12.8□□□□□ -0.36
GPC1-209ENST00000495100 ENTPD4Q9Y227 616 aa12.8□□□□□ -0.36
GPC1-209ENST00000495100 OTOL1A6NHN0 477 aaPredicted RBP12.8□□□□□ -0.36
GPC1-209ENST00000495100 CLCA1A8K7I4 914 aa12.8□□□□□ -0.36
GPC1-209ENST00000495100 H1F0P07305 194 aaKnown RBP12.8□□□□□ -0.36
GPC1-209ENST00000495100 IFI30P13284 250 aa12.8□□□□□ -0.36
GPC1-209ENST00000495100 CELP19835 753 aa12.8□□□□□ -0.36
GPC1-209ENST00000495100 AK4P27144 223 aaPredicted RBP12.8□□□□□ -0.36
GPC1-209ENST00000495100 PPM1AP35813 382 aa12.8□□□□□ -0.36
GPC1-209ENST00000495100 MAN2A2P49641 1150 aa12.8□□□□□ -0.36
GPC1-209ENST00000495100 TUBA3CQ13748 450 aa12.8□□□□□ -0.36
GPC1-209ENST00000495100 GRHL3Q8TE85 626 aa12.8□□□□□ -0.36
GPC1-209ENST00000495100 SLC38A5Q8WUX1 472 aa12.8□□□□□ -0.36
GPC1-209ENST00000495100 OVCA2Q8WZ82 227 aa12.8□□□□□ -0.36
GPC1-209ENST00000495100 CITED4Q96RK1 184 aa12.8□□□□□ -0.36
GPC1-209ENST00000495100 OR51I1Q9H343 314 aa12.8□□□□□ -0.36
GPC1-209ENST00000495100 DMRT3Q9NQL9 472 aa12.8□□□□□ -0.36
GPC1-209ENST00000495100 IFT52Q9Y366 437 aa12.8□□□□□ -0.36
GPC1-209ENST00000495100 ADORA3P0DMS8 318 aa12.8□□□□□ -0.36
GPC1-209ENST00000495100 ANXA8P13928 327 aa12.8□□□□□ -0.36
GPC1-209ENST00000495100 ITIH1P19827 911 aa12.8□□□□□ -0.36
GPC1-209ENST00000495100 SIM1P81133 766 aaPredicted RBP12.8□□□□□ -0.36
GPC1-209ENST00000495100 INSL4Q14641 139 aa12.8□□□□□ -0.36
GPC1-209ENST00000495100 MFSD4BQ5TF39 518 aa12.8□□□□□ -0.36
GPC1-209ENST00000495100 REEP3Q6NUK4 255 aa12.8□□□□□ -0.36
GPC1-209ENST00000495100 NXPE4Q6UWF7 544 aa12.8□□□□□ -0.36
GPC1-209ENST00000495100 TMPRSS11AQ6ZMR5 421 aa12.8□□□□□ -0.36
GPC1-209ENST00000495100 NCCRP1Q6ZVX7 275 aaPredicted RBP12.8□□□□□ -0.36
GPC1-209ENST00000495100 SERPINA11Q86U17 422 aa12.8□□□□□ -0.36
GPC1-209ENST00000495100 PRSS58Q8IYP2 241 aa12.8□□□□□ -0.36
GPC1-209ENST00000495100 DEFB119Q8N690 84 aa12.8□□□□□ -0.36
GPC1-209ENST00000495100 C10orf53Q8N6V4 93 aa12.8□□□□□ -0.36
GPC1-209ENST00000495100 GOLM1Q8NBJ4 401 aa12.8□□□□□ -0.36
GPC1-209ENST00000495100 GEMIN6Q8WXD5 167 aaKnown RBP12.8□□□□□ -0.36
GPC1-209ENST00000495100 BADQ92934 168 aa12.8□□□□□ -0.36
GPC1-209ENST00000495100 TUBA1CQ9BQE3 449 aa12.8□□□□□ -0.36
GPC1-209ENST00000495100 TSSK6Q9BXA6 273 aa12.8□□□□□ -0.36
GPC1-209ENST00000495100 STARD5Q9NSY2 213 aa12.8□□□□□ -0.36
GPC1-209ENST00000495100 HS3ST2Q9Y278 367 aa12.8□□□□□ -0.36
GPC1-209ENST00000495100 VWA8A3KMH1 1905 aa12.8□□□□□ -0.36
GPC1-209ENST00000495100 A0A0G2JMZ2 1700 aa12.8□□□□□ -0.36
GPC1-209ENST00000495100 LRRC37A2A6NM11 1700 aa12.8□□□□□ -0.36
GPC1-209ENST00000495100 ZNF236Q9UL36 1845 aa12.79□□□□□ -0.36
GPC1-209ENST00000495100 LRRC72A6NJI9 287 aa12.79□□□□□ -0.36
GPC1-209ENST00000495100 PI15O43692 258 aa12.79□□□□□ -0.36
GPC1-209ENST00000495100 CPNE6O95741 557 aa12.79□□□□□ -0.36
GPC1-209ENST00000495100 NRIP1P48552 1158 aa12.79□□□□□ -0.36
GPC1-209ENST00000495100 BTN3A2P78410 334 aa12.79□□□□□ -0.36
GPC1-209ENST00000495100 PCDH1Q08174 1060 aa12.79□□□□□ -0.36
GPC1-209ENST00000495100 LRRC32Q14392 662 aa12.79□□□□□ -0.36
GPC1-209ENST00000495100 HEPACAMQ14CZ8 416 aa12.79□□□□□ -0.36
GPC1-209ENST00000495100 PROX2Q3B8N5 592 aa12.79□□□□□ -0.36
GPC1-209ENST00000495100 NIPAL1Q6NVV3 410 aa12.79□□□□□ -0.36
GPC1-209ENST00000495100 PLEKHG7Q6ZR37 379 aa12.79□□□□□ -0.36
GPC1-209ENST00000495100 METTL27Q8N6F8 245 aaPredicted RBP12.79□□□□□ -0.36
GPC1-209ENST00000495100 GPR151Q8TDV0 419 aa12.79□□□□□ -0.36
GPC1-209ENST00000495100 FATE1Q969F0 183 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms