RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 BTN3A3O00478 584 aa21.63■■□□□ 1.05
USF3-203ENST00000491165 PCDHGA12O60330 932 aa21.63■■□□□ 1.05
USF3-203ENST00000491165 PRAMEF4O60810 478 aa21.63■■□□□ 1.05
USF3-203ENST00000491165 ZNF682O95780 498 aa21.63■■□□□ 1.05
USF3-203ENST00000491165 ANGPTL1O95841 491 aa21.63■■□□□ 1.05
USF3-203ENST00000491165 PCSK2P16519 638 aa21.63■■□□□ 1.05
USF3-203ENST00000491165 NR4A1P22736 598 aa21.63■■□□□ 1.05
USF3-203ENST00000491165 TACR1P25103 407 aa21.63■■□□□ 1.05
USF3-203ENST00000491165 CD97P48960 835 aa21.63■■□□□ 1.05
USF3-203ENST00000491165 NEK2P51955 445 aa21.63■■□□□ 1.05
USF3-203ENST00000491165 PRAMEF9Q5VWM5 478 aa21.63■■□□□ 1.05
USF3-203ENST00000491165 MSANTD1Q6ZTZ1 278 aa21.63■■□□□ 1.05
USF3-203ENST00000491165 GALNT5Q7Z7M9 940 aa21.63■■□□□ 1.05
USF3-203ENST00000491165 EID2Q8N6I1 236 aa21.63■■□□□ 1.05
USF3-203ENST00000491165 LCN9Q8WX39 176 aa21.63■■□□□ 1.05
USF3-203ENST00000491165 APOLD1Q96LR9 279 aa21.63■■□□□ 1.05
USF3-203ENST00000491165 ACAT2Q9BWD1 397 aa21.63■■□□□ 1.05
USF3-203ENST00000491165 GPRC5BQ9NZH0 403 aa21.63■■□□□ 1.05
USF3-203ENST00000491165 RNF215Q9Y6U7 377 aa21.63■■□□□ 1.05
USF3-203ENST00000491165 M0QX08 132 aa21.62■■□□□ 1.05
USF3-203ENST00000491165 YKT6O15498 198 aa21.62■■□□□ 1.05
USF3-203ENST00000491165 MITFO75030 526 aaPredicted RBP21.62■■□□□ 1.05
USF3-203ENST00000491165 B3GALT4O96024 378 aa21.62■■□□□ 1.05
USF3-203ENST00000491165 HNRNPFP52597 415 aaKnown RBP21.62■■□□□ 1.05
USF3-203ENST00000491165 CTF1Q16619 201 aa21.62■■□□□ 1.05
USF3-203ENST00000491165 SERPINA11Q86U17 422 aa21.62■■□□□ 1.05
USF3-203ENST00000491165 AMIGO1Q86WK6 493 aa21.62■■□□□ 1.05
USF3-203ENST00000491165 FAM20CQ8IXL6 584 aa21.62■■□□□ 1.05
USF3-203ENST00000491165 ADGRF3Q8IZF5 1079 aa21.62■■□□□ 1.05
USF3-203ENST00000491165 PARP8Q8N3A8 854 aa21.62■■□□□ 1.05
USF3-203ENST00000491165 ATL1Q8WXF7 558 aa21.62■■□□□ 1.05
USF3-203ENST00000491165 ZNF347Q96SE7 839 aa21.62■■□□□ 1.05
USF3-203ENST00000491165 SGPP1Q9BX95 441 aa21.62■■□□□ 1.05
USF3-203ENST00000491165 SPATA7Q9P0W8 599 aa21.62■■□□□ 1.05
USF3-203ENST00000491165 EVPLLA8MZ36 301 aa21.62■■□□□ 1.05
USF3-203ENST00000491165 BOLA2-SMG1P6H3BVE0 249 aa21.62■■□□□ 1.05
USF3-203ENST00000491165 XPNPEP2O43895 674 aa21.62■■□□□ 1.05
USF3-203ENST00000491165 LRATO95237 230 aa21.62■■□□□ 1.05
USF3-203ENST00000491165 ARHGDIAP52565 204 aa21.62■■□□□ 1.05
USF3-203ENST00000491165 OCA2Q04671 838 aa21.62■■□□□ 1.05
USF3-203ENST00000491165 EMX1Q04741 257 aaPredicted RBP21.62■■□□□ 1.05
USF3-203ENST00000491165 ARHGAP19Q14CB8 494 aa21.62■■□□□ 1.05
USF3-203ENST00000491165 ZCCHC8Q6NZY4 707 aaKnown RBP21.62■■□□□ 1.05
USF3-203ENST00000491165 CYP4Z1Q86W10 505 aa21.62■■□□□ 1.05
USF3-203ENST00000491165 THOC6Q86W42 341 aaKnown RBP21.62■■□□□ 1.05
USF3-203ENST00000491165 FAR1Q8WVX9 515 aa21.62■■□□□ 1.05
USF3-203ENST00000491165 BCL7BQ9BQE9 202 aa21.62■■□□□ 1.05
USF3-203ENST00000491165 RIBC2Q9H4K1 309 aa21.62■■□□□ 1.05
USF3-203ENST00000491165 RIF1Q5UIP0 2472 aaKnown RBP21.62■■□□□ 1.05
USF3-203ENST00000491165 FUOMA2VDF0 154 aa21.61■■□□□ 1.05
USF3-203ENST00000491165 ZSCAN9O15535 394 aaPredicted RBP21.61■■□□□ 1.05
USF3-203ENST00000491165 NPPBP16860 134 aa21.61■■□□□ 1.05
USF3-203ENST00000491165 OPRL1P41146 370 aa21.61■■□□□ 1.05
USF3-203ENST00000491165 PPP1CAP62136 330 aa21.61■■□□□ 1.05
USF3-203ENST00000491165 OR2T5Q6IEZ7 315 aa21.61■■□□□ 1.05
USF3-203ENST00000491165 ZNF551Q7Z340 670 aaPredicted RBP21.61■■□□□ 1.05
USF3-203ENST00000491165 ZNF438Q7Z4V0 828 aa21.61■■□□□ 1.05
USF3-203ENST00000491165 IGFN1Q86VF2 1251 aa21.61■■□□□ 1.05
USF3-203ENST00000491165 OR2L8Q8NGY9 312 aa21.61■■□□□ 1.05
USF3-203ENST00000491165 OR2T29Q8NH02 315 aa21.61■■□□□ 1.05
USF3-203ENST00000491165 RSC1A1Q92681 617 aa21.61■■□□□ 1.05
USF3-203ENST00000491165 IL1RAPQ9NPH3 570 aa21.61■■□□□ 1.05
USF3-203ENST00000491165 ABCG2Q9UNQ0 655 aa21.61■■□□□ 1.05
USF3-203ENST00000491165 KIR3DL1P43629 444 aa21.61■■□□□ 1.05
USF3-203ENST00000491165 SLC14A1Q13336 389 aa21.61■■□□□ 1.05
USF3-203ENST00000491165 ITGADQ13349 1161 aa21.61■■□□□ 1.05
USF3-203ENST00000491165 KEAP1Q14145 624 aa21.61■■□□□ 1.05
USF3-203ENST00000491165 ZNF846Q147U1 533 aa21.61■■□□□ 1.05
USF3-203ENST00000491165 TMCO5AQ8N6Q1 288 aa21.61■■□□□ 1.05
USF3-203ENST00000491165 L3MBTL4Q8NA19 623 aa21.61■■□□□ 1.05
USF3-203ENST00000491165 APIPQ96GX9 242 aa21.61■■□□□ 1.05
USF3-203ENST00000491165 DUSP23Q9BVJ7 150 aa21.61■■□□□ 1.05
USF3-203ENST00000491165 SRMSQ9H3Y6 488 aa21.61■■□□□ 1.05
USF3-203ENST00000491165 CCDC177Q9NQR7 707 aaPredicted RBP21.61■■□□□ 1.05
USF3-203ENST00000491165 LRIT1Q9P2V4 623 aa21.61■■□□□ 1.05
USF3-203ENST00000491165 TAC3Q9UHF0 121 aa21.61■■□□□ 1.05
USF3-203ENST00000491165 TPRKBQ9Y3C4 175 aa21.61■■□□□ 1.05
USF3-203ENST00000491165 HSPE1-MOB4S4R3N1 261 aa21.61■■□□□ 1.05
USF3-203ENST00000491165 UNC13CQ8NB66 2214 aa21.6■■□□□ 1.05
USF3-203ENST00000491165 NPIPB8E9PQR5 432 aa21.6■■□□□ 1.05
USF3-203ENST00000491165 PRICKLE3O43900 615 aaPredicted RBP21.6■■□□□ 1.05
USF3-203ENST00000491165 GABARAPO95166 117 aa21.6■■□□□ 1.05
USF3-203ENST00000491165 ACPPP15309 386 aa21.6■■□□□ 1.05
USF3-203ENST00000491165 OR4F3Q6IEY1 312 aa21.6■■□□□ 1.05
USF3-203ENST00000491165 CAPN13Q6MZZ7 669 aaPredicted RBP21.6■■□□□ 1.05
USF3-203ENST00000491165 DBX2Q6ZNG2 339 aa21.6■■□□□ 1.05
USF3-203ENST00000491165 B3GNT8Q7Z7M8 397 aa21.6■■□□□ 1.05
USF3-203ENST00000491165 KLHDC8AQ8IYD2 350 aa21.6■■□□□ 1.05
USF3-203ENST00000491165 RORBQ92753 470 aa21.6■■□□□ 1.05
USF3-203ENST00000491165 SH3YL1Q96HL8 342 aaPredicted RBP21.6■■□□□ 1.05
USF3-203ENST00000491165 TWSG1Q9GZX9 223 aa21.6■■□□□ 1.05
USF3-203ENST00000491165 NCDNQ9UBB6 729 aa21.6■■□□□ 1.05
USF3-203ENST00000491165 CLDN25C9JDP6 229 aa21.59■■□□□ 1.05
USF3-203ENST00000491165 GDF9O60383 454 aa21.59■■□□□ 1.05
USF3-203ENST00000491165 PORP16435 677 aaPredicted RBP21.59■■□□□ 1.05
USF3-203ENST00000491165 TYRP1P17643 537 aa21.59■■□□□ 1.05
USF3-203ENST00000491165 AMD1P17707 334 aa21.59■■□□□ 1.05
USF3-203ENST00000491165 TRPC1P48995 793 aa21.59■■□□□ 1.05
USF3-203ENST00000491165 DAPP51397 102 aa21.59■■□□□ 1.05
USF3-203ENST00000491165 IL1RL1Q01638 556 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms