RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 CEBPEQ15744 281 aa10.4□□□□□ -0.74
HDLBP-242ENST00000488013 UGT8Q16880 541 aa10.4□□□□□ -0.74
HDLBP-242ENST00000488013 VPS26BQ4G0F5 336 aa10.4□□□□□ -0.74
HDLBP-242ENST00000488013 SPANXN4Q5MJ08 99 aa10.4□□□□□ -0.74
HDLBP-242ENST00000488013 PRAMEF17Q5VTA0 474 aa10.4□□□□□ -0.74
HDLBP-242ENST00000488013 C1orf189Q5VU69 101 aa10.4□□□□□ -0.74
HDLBP-242ENST00000488013 ZNF385CQ66K41 422 aaPredicted RBP10.4□□□□□ -0.74
HDLBP-242ENST00000488013 BHLHB9Q6PI77 547 aa10.4□□□□□ -0.74
HDLBP-242ENST00000488013 FOXR1Q6PIV2 292 aa10.4□□□□□ -0.74
HDLBP-242ENST00000488013 PRSS41Q7RTY9 318 aa10.4□□□□□ -0.74
HDLBP-242ENST00000488013 YTHDF3Q7Z739 585 aaKnown RBP10.4□□□□□ -0.74
HDLBP-242ENST00000488013 SNX32Q86XE0 403 aa10.4□□□□□ -0.74
HDLBP-242ENST00000488013 FUNDC1Q8IVP5 155 aa10.4□□□□□ -0.74
HDLBP-242ENST00000488013 DPP10Q8N608 796 aa10.4□□□□□ -0.74
HDLBP-242ENST00000488013 DNAJB14Q8TBM8 379 aa10.4□□□□□ -0.74
HDLBP-242ENST00000488013 OR5P2Q8WZ92 322 aa10.4□□□□□ -0.74
HDLBP-242ENST00000488013 MR1Q95460 341 aa10.4□□□□□ -0.74
HDLBP-242ENST00000488013 GFM2Q969S9 779 aaKnown RBP10.4□□□□□ -0.74
HDLBP-242ENST00000488013 MIEF2Q96C03 454 aa10.4□□□□□ -0.74
HDLBP-242ENST00000488013 KLHL29Q96CT2 875 aa10.4□□□□□ -0.74
HDLBP-242ENST00000488013 NXPE2Q96DL1 559 aa10.4□□□□□ -0.74
HDLBP-242ENST00000488013 RBM18Q96H35 190 aaKnown RBP10.4□□□□□ -0.74
HDLBP-242ENST00000488013 PEX11GQ96HA9 241 aa10.4□□□□□ -0.74
HDLBP-242ENST00000488013 ZNF578Q96N58 590 aaPredicted RBP10.4□□□□□ -0.74
HDLBP-242ENST00000488013 BBS4Q96RK4 519 aa10.4□□□□□ -0.74
HDLBP-242ENST00000488013 SH3GL1Q99961 368 aa10.4□□□□□ -0.74
HDLBP-242ENST00000488013 EFHD1Q9BUP0 239 aa10.4□□□□□ -0.74
HDLBP-242ENST00000488013 GPR87Q9BY21 358 aa10.4□□□□□ -0.74
HDLBP-242ENST00000488013 PRTFDC1Q9NRG1 225 aa10.4□□□□□ -0.74
HDLBP-242ENST00000488013 SEMA3GQ9NS98 782 aa10.4□□□□□ -0.74
HDLBP-242ENST00000488013 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.4□□□□□ -0.741e-6■■□□□ 11.5
HDLBP-242ENST00000488013 CES1P1Q9UKY3 287 aa10.4□□□□□ -0.74
HDLBP-242ENST00000488013 AP3M1Q9Y2T2 418 aa10.4□□□□□ -0.74
HDLBP-242ENST00000488013 MAU2Q9Y6X3 613 aa10.4□□□□□ -0.74
HDLBP-242ENST00000488013 WDR87Q6ZQQ6 2873 aa10.39□□□□□ -0.75
HDLBP-242ENST00000488013 C15orf38-AP3S2A0A0A6YYH1 394 aa10.39□□□□□ -0.75
HDLBP-242ENST00000488013 LOC100653049A0A140TA62 436 aa10.39□□□□□ -0.75
HDLBP-242ENST00000488013 A0A1W2PRB8 838 aa10.39□□□□□ -0.75
HDLBP-242ENST00000488013 VSTM2BA6NLU5 285 aa10.39□□□□□ -0.75
HDLBP-242ENST00000488013 C9orf172C9J069 976 aa10.39□□□□□ -0.75
HDLBP-242ENST00000488013 RFXANKO14593 260 aa10.39□□□□□ -0.75
HDLBP-242ENST00000488013 HYAL3O43820 417 aaPredicted RBP10.39□□□□□ -0.75
HDLBP-242ENST00000488013 KRT34O76011 436 aa10.39□□□□□ -0.75
HDLBP-242ENST00000488013 SOX30O94993 753 aa10.39□□□□□ -0.75
HDLBP-242ENST00000488013 DLGAP3O95886 979 aa10.39□□□□□ -0.75
HDLBP-242ENST00000488013 B3GALT4O96024 378 aa10.39□□□□□ -0.75
HDLBP-242ENST00000488013 IGHEP01854 428 aa10.39□□□□□ -0.75
HDLBP-242ENST00000488013 KRT16P08779 473 aa10.39□□□□□ -0.75
HDLBP-242ENST00000488013 LAMP1P11279 417 aa10.39□□□□□ -0.75
HDLBP-242ENST00000488013 PORP16435 677 aaPredicted RBP10.39□□□□□ -0.75
HDLBP-242ENST00000488013 ETV5P41161 510 aa10.39□□□□□ -0.75
HDLBP-242ENST00000488013 MAGEA8P43361 318 aa10.39□□□□□ -0.75
HDLBP-242ENST00000488013 XKP51811 444 aa10.39□□□□□ -0.75
HDLBP-242ENST00000488013 MANFP55145 182 aaKnown RBP10.39□□□□□ -0.75
HDLBP-242ENST00000488013 RPS15P62841 145 aaKnown RBP10.39□□□□□ -0.75
HDLBP-242ENST00000488013 OLR1P78380 273 aa10.39□□□□□ -0.75
HDLBP-242ENST00000488013 TXNL4AP83876 142 aaKnown RBP10.39□□□□□ -0.75
HDLBP-242ENST00000488013 MAT1AQ00266 395 aaKnown RBP10.39□□□□□ -0.75
HDLBP-242ENST00000488013 PLIN5Q00G26 463 aa10.39□□□□□ -0.75
HDLBP-242ENST00000488013 BNIP1Q12981 228 aa10.39□□□□□ -0.75
HDLBP-242ENST00000488013 NCF4Q15080 339 aa10.39□□□□□ -0.75
HDLBP-242ENST00000488013 TIGD2Q4W5G0 525 aa10.39□□□□□ -0.75
HDLBP-242ENST00000488013 C6orf163Q5TEZ5 329 aa10.39□□□□□ -0.75
HDLBP-242ENST00000488013 C18orf63Q68DL7 685 aa10.39□□□□□ -0.75
HDLBP-242ENST00000488013 HACD2Q6Y1H2 254 aa10.39□□□□□ -0.75
HDLBP-242ENST00000488013 DGLUCYQ7Z3D6 616 aa10.39□□□□□ -0.75
HDLBP-242ENST00000488013 ARPINQ7Z6K5 226 aa10.39□□□□□ -0.75
HDLBP-242ENST00000488013 ST13P4Q8IZP2 240 aaPredicted RBP10.39□□□□□ -0.75
HDLBP-242ENST00000488013 NLGN4XQ8N0W4 816 aa10.39□□□□□ -0.75
HDLBP-242ENST00000488013 LRRC25Q8N386 305 aaPredicted RBP10.39□□□□□ -0.75
HDLBP-242ENST00000488013 SLC38A9Q8NBW4 561 aa10.39□□□□□ -0.75
HDLBP-242ENST00000488013 PLPP5Q8NEB5 264 aa10.39□□□□□ -0.75
HDLBP-242ENST00000488013 NLGN4YQ8NFZ3 816 aaPredicted RBP10.39□□□□□ -0.75
HDLBP-242ENST00000488013 OR7A2PQ8NGA2 310 aa10.39□□□□□ -0.75
HDLBP-242ENST00000488013 OR5T3Q8NGG3 340 aa10.39□□□□□ -0.75
HDLBP-242ENST00000488013 OR9I1Q8NGQ6 314 aa10.39□□□□□ -0.75
HDLBP-242ENST00000488013 STT3BQ8TCJ2 826 aa10.39□□□□□ -0.75
HDLBP-242ENST00000488013 METTL21AQ8WXB1 218 aa10.39□□□□□ -0.75
HDLBP-242ENST00000488013 EXOSC8Q96B26 276 aaKnown RBP10.39□□□□□ -0.75
HDLBP-242ENST00000488013 MOAP1Q96BY2 351 aa10.39□□□□□ -0.75
HDLBP-242ENST00000488013 TEX37Q96LM6 180 aa10.39□□□□□ -0.75
HDLBP-242ENST00000488013 CCDC115Q96NT0 180 aa10.39□□□□□ -0.75
HDLBP-242ENST00000488013 HOPXQ9BPY8 73 aaPredicted RBP10.39□□□□□ -0.75
HDLBP-242ENST00000488013 SPRY4Q9C004 299 aa10.39□□□□□ -0.75
HDLBP-242ENST00000488013 C19orf25Q9UFG5 118 aaPredicted RBP10.39□□□□□ -0.75
HDLBP-242ENST00000488013 KCND3Q9UK17 655 aa10.39□□□□□ -0.75
HDLBP-242ENST00000488013 EXO1Q9UQ84 846 aaKnown RBP10.39□□□□□ -0.75
HDLBP-242ENST00000488013 PCM1Q15154 2024 aa10.38□□□□□ -0.75
HDLBP-242ENST00000488013 A0A096LPI6 279 aa10.38□□□□□ -0.75
HDLBP-242ENST00000488013 CDRT15L2A8MXV6 281 aa10.38□□□□□ -0.75
HDLBP-242ENST00000488013 MYO1GB0I1T2 1018 aa10.38□□□□□ -0.75
HDLBP-242ENST00000488013 AGRPO00253 132 aa10.38□□□□□ -0.75
HDLBP-242ENST00000488013 OR10H2O60403 315 aa10.38□□□□□ -0.75
HDLBP-242ENST00000488013 B4GALT2O60909 372 aa10.38□□□□□ -0.75
HDLBP-242ENST00000488013 ERAL1O75616 437 aaKnown RBP10.38□□□□□ -0.75
HDLBP-242ENST00000488013 BCAS2O75934 225 aaPredicted RBP10.38□□□□□ -0.75
HDLBP-242ENST00000488013 UNC5CO95185 931 aa10.38□□□□□ -0.75
HDLBP-242ENST00000488013 KCNH1O95259 989 aa10.38□□□□□ -0.75
HDLBP-242ENST00000488013 ATP1B1P05026 303 aa10.38□□□□□ -0.75
HDLBP-242ENST00000488013 ZGLP1P0C6A0 271 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms