RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 DMRTA2Q96SC8 542 aa10.4□□□□□ -0.74
RAB11FIP3-210ENST00000487899 PAFAH2Q99487 392 aa10.4□□□□□ -0.74
RAB11FIP3-210ENST00000487899 CCDC77Q9BR77 488 aa10.4□□□□□ -0.74
RAB11FIP3-210ENST00000487899 ACTR8Q9H981 624 aa10.4□□□□□ -0.74
RAB11FIP3-210ENST00000487899 CPSF2Q9P2I0 782 aaKnown RBP10.4□□□□□ -0.74
RAB11FIP3-210ENST00000487899 XPR1Q9UBH6 696 aa10.4□□□□□ -0.74
RAB11FIP3-210ENST00000487899 PCTPQ9UKL6 214 aa10.4□□□□□ -0.74
RAB11FIP3-210ENST00000487899 ATG4BQ9Y4P1 393 aa10.4□□□□□ -0.74
RAB11FIP3-210ENST00000487899 CLCA3PQ9Y6N3 262 aa10.4□□□□□ -0.74
RAB11FIP3-210ENST00000487899 INTS1Q8N201 2190 aaKnown RBP10.4□□□□□ -0.74
RAB11FIP3-210ENST00000487899 A0A1B0GTL3 188 aa10.39□□□□□ -0.75
RAB11FIP3-210ENST00000487899 A0A1W2PS29 197 aa10.39□□□□□ -0.75
RAB11FIP3-210ENST00000487899 ENO4A6NNW6 628 aa10.39□□□□□ -0.75
RAB11FIP3-210ENST00000487899 A8MVJ9 347 aa10.39□□□□□ -0.75
RAB11FIP3-210ENST00000487899 C19orf84I3L1E1 186 aa10.39□□□□□ -0.75
RAB11FIP3-210ENST00000487899 CLPSP04118 112 aa10.39□□□□□ -0.75
RAB11FIP3-210ENST00000487899 ABOP16442 354 aa10.39□□□□□ -0.75
RAB11FIP3-210ENST00000487899 AGAP20933 346 aa10.39□□□□□ -0.75
RAB11FIP3-210ENST00000487899 CPN2P22792 545 aa10.39□□□□□ -0.75
RAB11FIP3-210ENST00000487899 TYK2P29597 1187 aa10.39□□□□□ -0.75
RAB11FIP3-210ENST00000487899 BSGP35613 385 aa10.39□□□□□ -0.75
RAB11FIP3-210ENST00000487899 PIK3CGP48736 1102 aa10.39□□□□□ -0.75
RAB11FIP3-210ENST00000487899 RAP1GDS1P52306 607 aa10.39□□□□□ -0.75
RAB11FIP3-210ENST00000487899 CASP6P55212 293 aa10.39□□□□□ -0.75
RAB11FIP3-210ENST00000487899 TRAF3Q13114 568 aa10.39□□□□□ -0.75
RAB11FIP3-210ENST00000487899 SLAMF1Q13291 335 aa10.39□□□□□ -0.75
RAB11FIP3-210ENST00000487899 ZNF630Q2M218 657 aaPredicted RBP10.39□□□□□ -0.75
RAB11FIP3-210ENST00000487899 AP5B1Q2VPB7 878 aa10.39□□□□□ -0.75
RAB11FIP3-210ENST00000487899 OR4C11Q6IEV9 310 aa10.39□□□□□ -0.75
RAB11FIP3-210ENST00000487899 MRM1Q6IN84 353 aaKnown RBP10.39□□□□□ -0.75
RAB11FIP3-210ENST00000487899 METTL2BQ6P1Q9 378 aaKnown RBP10.39□□□□□ -0.75
RAB11FIP3-210ENST00000487899 KLC3Q6P597 504 aa10.39□□□□□ -0.75
RAB11FIP3-210ENST00000487899 ADGRD1Q6QNK2 874 aa10.39□□□□□ -0.75
RAB11FIP3-210ENST00000487899 C3P1Q6ZMU1 363 aa10.39□□□□□ -0.75
RAB11FIP3-210ENST00000487899 CHSY3Q70JA7 882 aa10.39□□□□□ -0.75
RAB11FIP3-210ENST00000487899 CD163Q86VB7 1156 aa10.39□□□□□ -0.75
RAB11FIP3-210ENST00000487899 DOLPP1Q86YN1 238 aa10.39□□□□□ -0.75
RAB11FIP3-210ENST00000487899 OR4N5Q8IXE1 308 aa10.39□□□□□ -0.75
RAB11FIP3-210ENST00000487899 MARVELD2Q8N4S9 558 aa10.39□□□□□ -0.75
RAB11FIP3-210ENST00000487899 PTGR2Q8N8N7 351 aaPredicted RBP10.39□□□□□ -0.75
RAB11FIP3-210ENST00000487899 PHF10Q8WUB8 498 aaKnown RBP10.39□□□□□ -0.75
RAB11FIP3-210ENST00000487899 DCAKDQ8WVC6 231 aa10.39□□□□□ -0.75
RAB11FIP3-210ENST00000487899 RGMAQ96B86 450 aa10.39□□□□□ -0.75
RAB11FIP3-210ENST00000487899 FBXL20Q96IG2 436 aa10.39□□□□□ -0.75
RAB11FIP3-210ENST00000487899 SCYL1Q96KG9 808 aa10.39□□□□□ -0.75
RAB11FIP3-210ENST00000487899 NSUN5Q96P11 429 aaKnown RBP10.39□□□□□ -0.75
RAB11FIP3-210ENST00000487899 CDK15Q96Q40 435 aa10.39□□□□□ -0.75
RAB11FIP3-210ENST00000487899 FMO2Q99518 471 aa10.39□□□□□ -0.75
RAB11FIP3-210ENST00000487899 VPS11Q9H270 941 aa10.39□□□□□ -0.75
RAB11FIP3-210ENST00000487899 IPPKQ9H8X2 491 aa10.39□□□□□ -0.75
RAB11FIP3-210ENST00000487899 ZDHHC11Q9H8X9 412 aa10.39□□□□□ -0.75
RAB11FIP3-210ENST00000487899 ZBTB26Q9HCK0 441 aa10.39□□□□□ -0.75
RAB11FIP3-210ENST00000487899 TIMMDC1Q9NPL8 285 aa10.39□□□□□ -0.75
RAB11FIP3-210ENST00000487899 HPF1Q9NWY4 346 aa10.39□□□□□ -0.75
RAB11FIP3-210ENST00000487899 ADGRE2Q9UHX3 823 aa10.39□□□□□ -0.75
RAB11FIP3-210ENST00000487899 PHF11Q9UIL8 331 aa10.39□□□□□ -0.75
RAB11FIP3-210ENST00000487899 PPT2Q9UMR5 302 aa10.39□□□□□ -0.75
RAB11FIP3-210ENST00000487899 RNF11Q9Y3C5 154 aa10.39□□□□□ -0.75
RAB11FIP3-210ENST00000487899 ASB4Q9Y574 426 aa10.39□□□□□ -0.75
RAB11FIP3-210ENST00000487899 PCDHGA11Q9Y5H2 935 aa10.39□□□□□ -0.75
RAB11FIP3-210ENST00000487899 SPACA6W5XKT8 324 aa10.39□□□□□ -0.75
RAB11FIP3-210ENST00000487899 A0A1B0GTH9 108 aa10.38□□□□□ -0.75
RAB11FIP3-210ENST00000487899 G3V3Y1 287 aa10.38□□□□□ -0.75
RAB11FIP3-210ENST00000487899 KLRC4-KLRK1H3BQV0 150 aa10.38□□□□□ -0.75
RAB11FIP3-210ENST00000487899 GLSO94925 669 aaPredicted RBP10.38□□□□□ -0.75
RAB11FIP3-210ENST00000487899 NADKO95544 446 aaPredicted RBP10.38□□□□□ -0.75
RAB11FIP3-210ENST00000487899 AIFM1O95831 613 aa10.38□□□□□ -0.75
RAB11FIP3-210ENST00000487899 RPS17P08708 135 aaKnown RBP10.38□□□□□ -0.75
RAB11FIP3-210ENST00000487899 SBK3P0C264 359 aa10.38□□□□□ -0.75
RAB11FIP3-210ENST00000487899 CCL3P10147 92 aa10.38□□□□□ -0.75
RAB11FIP3-210ENST00000487899 NR2F6P10588 404 aa10.38□□□□□ -0.75
RAB11FIP3-210ENST00000487899 HTR1EP28566 365 aa10.38□□□□□ -0.75
RAB11FIP3-210ENST00000487899 TNFRSF8P28908 595 aa10.38□□□□□ -0.75
RAB11FIP3-210ENST00000487899 ARFIP1P53367 373 aa10.38□□□□□ -0.75
RAB11FIP3-210ENST00000487899 PLIN5Q00G26 463 aa10.38□□□□□ -0.75
RAB11FIP3-210ENST00000487899 CUL3Q13618 768 aa10.38□□□□□ -0.75
RAB11FIP3-210ENST00000487899 CPSF6Q16630 551 aaKnown RBP eCLIP10.38□□□□□ -0.75
RAB11FIP3-210ENST00000487899 SPRED3Q2MJR0 410 aa10.38□□□□□ -0.75
RAB11FIP3-210ENST00000487899 LYPD8Q6UX82 237 aa10.38□□□□□ -0.75
RAB11FIP3-210ENST00000487899 IL20RBQ6UXL0 311 aa10.38□□□□□ -0.75
RAB11FIP3-210ENST00000487899 RPS27LQ71UM5 84 aaKnown RBP10.38□□□□□ -0.75
RAB11FIP3-210ENST00000487899 GPR180Q86V85 440 aa10.38□□□□□ -0.75
RAB11FIP3-210ENST00000487899 OR2M7Q8NG81 312 aa10.38□□□□□ -0.75
RAB11FIP3-210ENST00000487899 OR52N2Q8NGI0 321 aa10.38□□□□□ -0.75
RAB11FIP3-210ENST00000487899 FAM57AQ8TBR7 257 aa10.38□□□□□ -0.75
RAB11FIP3-210ENST00000487899 TTTY12Q9BZ98 90 aa10.38□□□□□ -0.75
RAB11FIP3-210ENST00000487899 TRIM8Q9BZR9 551 aa10.38□□□□□ -0.75
RAB11FIP3-210ENST00000487899 RPF2Q9H7B2 306 aaKnown RBP10.38□□□□□ -0.75
RAB11FIP3-210ENST00000487899 DDX31Q9H8H2 851 aaKnown RBP10.38□□□□□ -0.75
RAB11FIP3-210ENST00000487899 SH2D2AQ9NP31 389 aa10.38□□□□□ -0.75
RAB11FIP3-210ENST00000487899 MTRF1LQ9UGC7 380 aaKnown RBP10.38□□□□□ -0.75
RAB11FIP3-210ENST00000487899 ERVK-11Q9UQG0 969 aa10.38□□□□□ -0.75
RAB11FIP3-210ENST00000487899 ANGPTL3Q9Y5C1 460 aa10.38□□□□□ -0.75
RAB11FIP3-210ENST00000487899 HRH3Q9Y5N1 445 aa10.38□□□□□ -0.75
RAB11FIP3-210ENST00000487899 LIPGQ9Y5X9 500 aa10.38□□□□□ -0.75
RAB11FIP3-210ENST00000487899 A0A1W2PR48 441 aa10.37□□□□□ -0.75
RAB11FIP3-210ENST00000487899 WASHC1A8K0Z3 465 aa10.37□□□□□ -0.75
RAB11FIP3-210ENST00000487899 FAM166BA8MTA8 275 aa10.37□□□□□ -0.75
RAB11FIP3-210ENST00000487899 E9PLN8 166 aa10.37□□□□□ -0.75
RAB11FIP3-210ENST00000487899 STX16-NPEPL1H3BU86 382 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms