RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 PLCH1Q4KWH8 1693 aa3.2□□□□□ -1.9
LINC00888-204ENST00000487386 PFASO15067 1338 aa3.19□□□□□ -1.9
LINC00888-204ENST00000487386 NFAT5O94916 1531 aa3.19□□□□□ -1.9
LINC00888-204ENST00000487386 AHDC1Q5TGY3 1603 aaPredicted RBP3.19□□□□□ -1.9
LINC00888-204ENST00000487386 PHLPP1O60346 1717 aa3.19□□□□□ -1.9
LINC00888-204ENST00000487386 RGPD1P0DJD0 1748 aa3.19□□□□□ -1.9
LINC00888-204ENST00000487386 IGLV3-10A0A075B6K4 115 aa3.19□□□□□ -1.9
LINC00888-204ENST00000487386 A0A087WWV3 80 aa3.19□□□□□ -1.9
LINC00888-204ENST00000487386 TRGV8A0A0C4DH27 118 aa3.19□□□□□ -1.9
LINC00888-204ENST00000487386 TRBV5-4A0A0C4DH59 114 aa3.19□□□□□ -1.9
LINC00888-204ENST00000487386 ARHGEF37A1IGU5 675 aa3.19□□□□□ -1.9
LINC00888-204ENST00000487386 ANKDD1BA6NHY2 528 aa3.19□□□□□ -1.9
LINC00888-204ENST00000487386 RPL37AP8A6NKH3 93 aa3.19□□□□□ -1.9
LINC00888-204ENST00000487386 ANHXE9PGG2 379 aa3.19□□□□□ -1.9
LINC00888-204ENST00000487386 PHOX2AO14813 284 aa3.19□□□□□ -1.9
LINC00888-204ENST00000487386 P2RX6O15547 441 aa3.19□□□□□ -1.9
LINC00888-204ENST00000487386 PHF1O43189 567 aaPredicted RBP3.19□□□□□ -1.9
LINC00888-204ENST00000487386 OR6B1O95007 311 aa3.19□□□□□ -1.9
LINC00888-204ENST00000487386 FGF19O95750 216 aa3.19□□□□□ -1.9
LINC00888-204ENST00000487386 HPP00738 406 aa3.19□□□□□ -1.9
LINC00888-204ENST00000487386 MELTFP08582 738 aa3.19□□□□□ -1.9
LINC00888-204ENST00000487386 BACE1P56817 501 aa3.19□□□□□ -1.9
LINC00888-204ENST00000487386 POM121L1PQ3SYA9 428 aa3.19□□□□□ -1.9
LINC00888-204ENST00000487386 CAVIN1Q6NZI2 390 aaKnown RBP3.19□□□□□ -1.9
LINC00888-204ENST00000487386 DCLRE1AQ6PJP8 1040 aa3.19□□□□□ -1.9
LINC00888-204ENST00000487386 C17orf107Q6ZR85 190 aa3.19□□□□□ -1.9
LINC00888-204ENST00000487386 KRTAP5-2Q701N4 177 aa3.19□□□□□ -1.9
LINC00888-204ENST00000487386 ZPLD1Q8TCW7 415 aa3.19□□□□□ -1.9
LINC00888-204ENST00000487386 SLC35C1Q96A29 364 aa3.19□□□□□ -1.9
LINC00888-204ENST00000487386 GBP5Q96PP8 586 aa3.19□□□□□ -1.9
LINC00888-204ENST00000487386 CCM2Q9BSQ5 444 aa3.19□□□□□ -1.9
LINC00888-204ENST00000487386 STRADBQ9C0K7 418 aa3.19□□□□□ -1.9
LINC00888-204ENST00000487386 WDR41Q9HAD4 459 aa3.19□□□□□ -1.9
LINC00888-204ENST00000487386 MRPL17Q9NRX2 175 aaKnown RBP3.19□□□□□ -1.9
LINC00888-204ENST00000487386 ZNF581Q9P0T4 197 aa3.19□□□□□ -1.9
LINC00888-204ENST00000487386 SPATA2Q9UM82 520 aa3.19□□□□□ -1.9
LINC00888-204ENST00000487386 KNSTRNQ9Y448 316 aa3.19□□□□□ -1.9
LINC00888-204ENST00000487386 TMEM94Q12767 1356 aa3.19□□□□□ -1.9
LINC00888-204ENST00000487386 NPC1L1Q9UHC9 1359 aa3.19□□□□□ -1.9
LINC00888-204ENST00000487386 PARP4Q9UKK3 1724 aaKnown RBP3.19□□□□□ -1.9
LINC00888-204ENST00000487386 COL16A1Q07092 1604 aaPredicted RBP3.19□□□□□ -1.9
LINC00888-204ENST00000487386 ABCC6O95255 1503 aa3.19□□□□□ -1.9
LINC00888-204ENST00000487386 CPSF1Q10570 1443 aaKnown RBP3.19□□□□□ -1.9
LINC00888-204ENST00000487386 TNS3Q68CZ2 1445 aa3.19□□□□□ -1.9
LINC00888-204ENST00000487386 C1orf167Q5SNV9 1468 aa3.18□□□□□ -1.9
LINC00888-204ENST00000487386 TRAV34A0A0B4J273 112 aa3.18□□□□□ -1.9
LINC00888-204ENST00000487386 SRRM4A7MD48 611 aaKnown RBP3.18□□□□□ -1.9
LINC00888-204ENST00000487386 CCER2I3L3R5 266 aa3.18□□□□□ -1.9
LINC00888-204ENST00000487386 IFIT3O14879 490 aaKnown RBP3.18□□□□□ -1.9
LINC00888-204ENST00000487386 SEMA4FO95754 770 aa3.18□□□□□ -1.9
LINC00888-204ENST00000487386 SCG2P13521 617 aa3.18□□□□□ -1.9
LINC00888-204ENST00000487386 SLC1A3P43003 542 aa3.18□□□□□ -1.9
LINC00888-204ENST00000487386 RIDAP52758 137 aaKnown RBP3.18□□□□□ -1.9
LINC00888-204ENST00000487386 ACY1Q03154 408 aa3.18□□□□□ -1.9
LINC00888-204ENST00000487386 FOLH1Q04609 750 aa3.18□□□□□ -1.9
LINC00888-204ENST00000487386 ABRQ12979 859 aa3.18□□□□□ -1.9
LINC00888-204ENST00000487386 GPR50Q13585 617 aa3.18□□□□□ -1.9
LINC00888-204ENST00000487386 MPP7Q5T2T1 576 aa3.18□□□□□ -1.9
LINC00888-204ENST00000487386 LCE3EQ5T5B0 92 aa3.18□□□□□ -1.9
LINC00888-204ENST00000487386 AGAP7PQ5VUJ5 663 aa3.18□□□□□ -1.9
LINC00888-204ENST00000487386 MCM10Q7L590 875 aa3.18□□□□□ -1.9
LINC00888-204ENST00000487386 SLC43A2Q8N370 569 aa3.18□□□□□ -1.9
LINC00888-204ENST00000487386 RTL3Q8N8U3 475 aaKnown RBP3.18□□□□□ -1.9
LINC00888-204ENST00000487386 TYMSOSQ8TAI1 123 aa3.18□□□□□ -1.9
LINC00888-204ENST00000487386 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.18□□□□□ -1.9
LINC00888-204ENST00000487386 SMPDL3AQ92484 453 aa3.18□□□□□ -1.9
LINC00888-204ENST00000487386 FAM162AQ96A26 154 aa3.18□□□□□ -1.9
LINC00888-204ENST00000487386 ATG101Q9BSB4 218 aa3.18□□□□□ -1.9
LINC00888-204ENST00000487386 PDRG1Q9NUG6 133 aa3.18□□□□□ -1.9
LINC00888-204ENST00000487386 SLCO1C1Q9NYB5 712 aa3.18□□□□□ -1.9
LINC00888-204ENST00000487386 TMOD3Q9NYL9 352 aa3.18□□□□□ -1.9
LINC00888-204ENST00000487386 THYN1Q9P016 225 aa3.18□□□□□ -1.9
LINC00888-204ENST00000487386 HBS1LQ9Y450 684 aaKnown RBP3.18□□□□□ -1.9
LINC00888-204ENST00000487386 HCFC1P51610 2035 aa3.18□□□□□ -1.9
LINC00888-204ENST00000487386 LTBP4Q8N2S1 1624 aa3.18□□□□□ -1.9
LINC00888-204ENST00000487386 COL22A1Q8NFW1 1626 aaPredicted RBP3.18□□□□□ -1.9
LINC00888-204ENST00000487386 SALL1Q9NSC2 1324 aa3.18□□□□□ -1.9
LINC00888-204ENST00000487386 PXDNQ92626 1479 aa3.17□□□□□ -1.9
LINC00888-204ENST00000487386 RTL1A6NKG5 1358 aa3.17□□□□□ -1.9
LINC00888-204ENST00000487386 POLR3AO14802 1390 aaPredicted RBP3.17□□□□□ -1.9
LINC00888-204ENST00000487386 C2orf92A0A1B0GVN3 265 aa3.17□□□□□ -1.9
LINC00888-204ENST00000487386 YDJCA8MPS7 323 aa3.17□□□□□ -1.9
LINC00888-204ENST00000487386 A8MU10 97 aa3.17□□□□□ -1.9
LINC00888-204ENST00000487386 WDR46O15213 610 aaKnown RBP3.17□□□□□ -1.9
LINC00888-204ENST00000487386 ZNF354AO60765 605 aaPredicted RBP3.17□□□□□ -1.9
LINC00888-204ENST00000487386 HSPA4LO95757 839 aa3.17□□□□□ -1.9
LINC00888-204ENST00000487386 RLN1P04808 185 aa3.17□□□□□ -1.9
LINC00888-204ENST00000487386 HSP90AA1P07900 732 aaKnown RBP3.17□□□□□ -1.9
LINC00888-204ENST00000487386 CD1DP15813 335 aa3.17□□□□□ -1.9
LINC00888-204ENST00000487386 CASTP20810 708 aaKnown RBP3.17□□□□□ -1.9
LINC00888-204ENST00000487386 TNNT2P45379 298 aaPredicted RBP3.17□□□□□ -1.9
LINC00888-204ENST00000487386 IER3P46695 156 aa3.17□□□□□ -1.9
LINC00888-204ENST00000487386 NPBWR1P48145 328 aa3.17□□□□□ -1.9
LINC00888-204ENST00000487386 WDR43Q15061 677 aaKnown RBP eCLIP3.17□□□□□ -1.9
LINC00888-204ENST00000487386 C3AR1Q16581 482 aa3.17□□□□□ -1.9
LINC00888-204ENST00000487386 ZRANB3Q5FWF4 1079 aa3.17□□□□□ -1.9
LINC00888-204ENST00000487386 RFPL4BQ6ZWI9 263 aa3.17□□□□□ -1.9
LINC00888-204ENST00000487386 Q71RC1 249 aaPredicted RBP3.17□□□□□ -1.9
LINC00888-204ENST00000487386 TMUB2Q71RG4 321 aa3.17□□□□□ -1.9
LINC00888-204ENST00000487386 FAM9BQ8IZU0 186 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms