RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 LRRC25Q8N386 305 aaPredicted RBP17.91■□□□□ 0.46
SMPDL3A-202ENST00000487215 SLC22A8Q8TCC7 542 aa17.91■□□□□ 0.46
SMPDL3A-202ENST00000487215 PAQR8Q8TEZ7 354 aa17.91■□□□□ 0.46
SMPDL3A-202ENST00000487215 RNASE6Q93091 150 aaKnown RBP17.91■□□□□ 0.46
SMPDL3A-202ENST00000487215 ANKRD9Q96BM1 317 aaPredicted RBP17.91■□□□□ 0.46
SMPDL3A-202ENST00000487215 CAPZA3Q96KX2 299 aa17.91■□□□□ 0.46
SMPDL3A-202ENST00000487215 KCNC2Q96PR1 638 aa17.91■□□□□ 0.46
SMPDL3A-202ENST00000487215 EHD1Q9H4M9 534 aa17.91■□□□□ 0.46
SMPDL3A-202ENST00000487215 ZFP64Q9NPA5 681 aa17.91■□□□□ 0.46
SMPDL3A-202ENST00000487215 DNAJC11Q9NVH1 559 aa17.91■□□□□ 0.46
SMPDL3A-202ENST00000487215 BOKQ9UMX3 212 aaPredicted RBP17.91■□□□□ 0.46
SMPDL3A-202ENST00000487215 DVL2O14641 736 aa17.9■□□□□ 0.46
SMPDL3A-202ENST00000487215 TAPBPO15533 448 aa17.9■□□□□ 0.46
SMPDL3A-202ENST00000487215 CD22P20273 847 aa17.9■□□□□ 0.46
SMPDL3A-202ENST00000487215 DOC2AQ14183 400 aa17.9■□□□□ 0.46
SMPDL3A-202ENST00000487215 TGFBIQ15582 683 aa17.9■□□□□ 0.46
SMPDL3A-202ENST00000487215 FBXL19-AS1Q494R0 122 aa17.9■□□□□ 0.46
SMPDL3A-202ENST00000487215 FBXO48Q5FWF7 155 aa17.9■□□□□ 0.46
SMPDL3A-202ENST00000487215 NEIL3Q8TAT5 605 aa17.9■□□□□ 0.46
SMPDL3A-202ENST00000487215 SPACA9Q96E40 222 aaPredicted RBP17.9■□□□□ 0.46
SMPDL3A-202ENST00000487215 SENP5Q96HI0 755 aaPredicted RBP17.9■□□□□ 0.46
SMPDL3A-202ENST00000487215 ROGDIQ9GZN7 287 aa17.9■□□□□ 0.46
SMPDL3A-202ENST00000487215 PROK2Q9HC23 129 aa17.9■□□□□ 0.46
SMPDL3A-202ENST00000487215 ACKR4Q9NPB9 350 aa17.9■□□□□ 0.46
SMPDL3A-202ENST00000487215 WWOXQ9NZC7 414 aa17.9■□□□□ 0.46
SMPDL3A-202ENST00000487215 KDM4EB2RXH2 506 aaPredicted RBP17.89■□□□□ 0.45
SMPDL3A-202ENST00000487215 RTCAO00442 366 aaKnown RBP17.89■□□□□ 0.45
SMPDL3A-202ENST00000487215 CLGNO14967 610 aa17.89■□□□□ 0.45
SMPDL3A-202ENST00000487215 FGF17O60258 216 aa17.89■□□□□ 0.45
SMPDL3A-202ENST00000487215 IGKV3-11P04433 115 aa17.89■□□□□ 0.45
SMPDL3A-202ENST00000487215 TACR1P25103 407 aa17.89■□□□□ 0.45
SMPDL3A-202ENST00000487215 ATP5A1P25705 553 aaKnown RBP17.89■□□□□ 0.45
SMPDL3A-202ENST00000487215 TRPC1P48995 793 aa17.89■□□□□ 0.45
SMPDL3A-202ENST00000487215 WNT3P56703 355 aa17.89■□□□□ 0.45
SMPDL3A-202ENST00000487215 DAZAP2Q15038 168 aaPredicted RBP17.89■□□□□ 0.45
SMPDL3A-202ENST00000487215 ACSF3Q4G176 576 aaPredicted RBP17.89■□□□□ 0.45
SMPDL3A-202ENST00000487215 OR4N5Q8IXE1 308 aa17.89■□□□□ 0.45
SMPDL3A-202ENST00000487215 PDIK1LQ8N165 341 aa17.89■□□□□ 0.45
SMPDL3A-202ENST00000487215 LIX1Q8N485 282 aa17.89■□□□□ 0.45
SMPDL3A-202ENST00000487215 ACOT4Q8N9L9 421 aa17.89■□□□□ 0.45
SMPDL3A-202ENST00000487215 TNIP2Q8NFZ5 429 aa17.89■□□□□ 0.45
SMPDL3A-202ENST00000487215 ACTRT1Q8TDG2 376 aa17.89■□□□□ 0.45
SMPDL3A-202ENST00000487215 ESAMQ96AP7 390 aa17.89■□□□□ 0.45
SMPDL3A-202ENST00000487215 WDR34Q96EX3 536 aa17.89■□□□□ 0.45
SMPDL3A-202ENST00000487215 PTCD3Q96EY7 689 aaKnown RBP17.89■□□□□ 0.45
SMPDL3A-202ENST00000487215 LRRC46Q96FV0 321 aa17.89■□□□□ 0.45
SMPDL3A-202ENST00000487215 TBCDQ9BTW9 1192 aa17.89■□□□□ 0.45
SMPDL3A-202ENST00000487215 QPCTLQ9NXS2 382 aa17.89■□□□□ 0.45
SMPDL3A-202ENST00000487215 TEX264Q9Y6I9 313 aa17.89■□□□□ 0.45
SMPDL3A-202ENST00000487215 SPACA6W5XKT8 324 aa17.89■□□□□ 0.45
SMPDL3A-202ENST00000487215 HRKO00198 91 aa17.88■□□□□ 0.45
SMPDL3A-202ENST00000487215 ATE1O95260 518 aa17.88■□□□□ 0.45
SMPDL3A-202ENST00000487215 RAF1P04049 648 aa17.88■□□□□ 0.45
SMPDL3A-202ENST00000487215 COX7A2P14406 83 aa17.88■□□□□ 0.45
SMPDL3A-202ENST00000487215 IVDP26440 423 aa17.88■□□□□ 0.45
SMPDL3A-202ENST00000487215 CEACAM8P31997 349 aaPredicted RBP17.88■□□□□ 0.45
SMPDL3A-202ENST00000487215 GGT5P36269 586 aa17.88■□□□□ 0.45
SMPDL3A-202ENST00000487215 STT3AP46977 705 aa17.88■□□□□ 0.45
SMPDL3A-202ENST00000487215 HSPA7P48741 367 aa17.88■□□□□ 0.45
SMPDL3A-202ENST00000487215 IGLV3-21P80748 117 aaPredicted RBP17.88■□□□□ 0.45
SMPDL3A-202ENST00000487215 MGAT5Q09328 741 aa17.88■□□□□ 0.45
SMPDL3A-202ENST00000487215 TBL3Q12788 808 aaKnown RBP17.88■□□□□ 0.45
SMPDL3A-202ENST00000487215 FRG1Q14331 258 aaKnown RBP17.88■□□□□ 0.45
SMPDL3A-202ENST00000487215 POMZP3Q6PJE2 187 aa17.88■□□□□ 0.45
SMPDL3A-202ENST00000487215 DGAT2L6Q6ZPD8 337 aa17.88■□□□□ 0.45
SMPDL3A-202ENST00000487215 TCAIMQ8N3R3 496 aa17.88■□□□□ 0.45
SMPDL3A-202ENST00000487215 SLC15A4Q8N697 577 aa17.88■□□□□ 0.45
SMPDL3A-202ENST00000487215 SNX31Q8N9S9 440 aa17.88■□□□□ 0.45
SMPDL3A-202ENST00000487215 WFDC11Q8NEX6 87 aa17.88■□□□□ 0.45
SMPDL3A-202ENST00000487215 OR10G3Q8NGC4 313 aa17.88■□□□□ 0.45
SMPDL3A-202ENST00000487215 DGAT2Q96PD7 388 aa17.88■□□□□ 0.45
SMPDL3A-202ENST00000487215 EFCAB11Q9BUY7 163 aa17.88■□□□□ 0.45
SMPDL3A-202ENST00000487215 MS4A8Q9BY19 250 aa17.88■□□□□ 0.45
SMPDL3A-202ENST00000487215 DDX47Q9H0S4 455 aaKnown RBP17.88■□□□□ 0.45
SMPDL3A-202ENST00000487215 CNOT10Q9H9A5 744 aaKnown RBP17.88■□□□□ 0.45
SMPDL3A-202ENST00000487215 MTRF1LQ9UGC7 380 aaKnown RBP17.88■□□□□ 0.45
SMPDL3A-202ENST00000487215 CHCHD2Q9Y6H1 151 aaPredicted RBP17.88■□□□□ 0.45
SMPDL3A-202ENST00000487215 FLNAP21333 2647 aaKnown RBP17.88■□□□□ 0.45
SMPDL3A-202ENST00000487215 VPS13CQ709C8 3753 aa17.87■□□□□ 0.45
SMPDL3A-202ENST00000487215 SCELO95171 688 aa17.87■□□□□ 0.45
SMPDL3A-202ENST00000487215 LRATO95237 230 aa17.87■□□□□ 0.45
SMPDL3A-202ENST00000487215 EPPINO95925 133 aa17.87■□□□□ 0.45
SMPDL3A-202ENST00000487215 HIST1H1TP22492 207 aaPredicted RBP17.87■□□□□ 0.45
SMPDL3A-202ENST00000487215 CPN2P22792 545 aa17.87■□□□□ 0.45
SMPDL3A-202ENST00000487215 LTBQ06643 244 aa17.87■□□□□ 0.45
SMPDL3A-202ENST00000487215 DEFB113Q30KQ7 82 aa17.87■□□□□ 0.45
SMPDL3A-202ENST00000487215 BIVMQ86UB2 503 aa17.87■□□□□ 0.45
SMPDL3A-202ENST00000487215 FAM13CQ8NE31 585 aa17.87■□□□□ 0.45
SMPDL3A-202ENST00000487215 SRFBP1Q8NEF9 429 aaKnown RBP17.87■□□□□ 0.45
SMPDL3A-202ENST00000487215 PPWD1Q96BP3 646 aaKnown RBP17.87■□□□□ 0.45
SMPDL3A-202ENST00000487215 LRRC39Q96DD0 335 aa17.87■□□□□ 0.45
SMPDL3A-202ENST00000487215 VPS39Q96JC1 886 aa17.87■□□□□ 0.45
SMPDL3A-202ENST00000487215 JSRP1Q96MG2 331 aaPredicted RBP17.87■□□□□ 0.45
SMPDL3A-202ENST00000487215 OSBPL9Q96SU4 736 aa17.87■□□□□ 0.45
SMPDL3A-202ENST00000487215 SMR3AQ99954 134 aa17.87■□□□□ 0.45
SMPDL3A-202ENST00000487215 DERL2Q9GZP9 239 aa17.87■□□□□ 0.45
SMPDL3A-202ENST00000487215 POPDC3Q9HBV1 291 aa17.87■□□□□ 0.45
SMPDL3A-202ENST00000487215 CNIH4Q9P003 139 aa17.87■□□□□ 0.45
SMPDL3A-202ENST00000487215 FOXD3Q9UJU5 478 aaPredicted RBP17.87■□□□□ 0.45
SMPDL3A-202ENST00000487215 CNOT11Q9UKZ1 510 aaKnown RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms