RNA–Protein interactions for RNA: ENST00000487169.5

HDLBP-241, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 4,339 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-241ENST00000487169 NENFQ9UMX5 172 aa12.79□□□□□ -0.36
HDLBP-241ENST00000487169 G3V2L1 256 aa12.78□□□□□ -0.36
HDLBP-241ENST00000487169 H3BSA7 217 aa12.78□□□□□ -0.36
HDLBP-241ENST00000487169 SLC7A9P82251 487 aa12.78□□□□□ -0.36
HDLBP-241ENST00000487169 ODF4Q2M2E3 257 aa12.78□□□□□ -0.36
HDLBP-241ENST00000487169 PKDCCQ504Y2 493 aa12.78□□□□□ -0.36
HDLBP-241ENST00000487169 TCEAL6Q6IPX3 200 aa12.78□□□□□ -0.36
HDLBP-241ENST00000487169 LETMD1Q6P1Q0 360 aa12.78□□□□□ -0.36
HDLBP-241ENST00000487169 HSD11B1LQ7Z5J1 315 aa12.78□□□□□ -0.36
HDLBP-241ENST00000487169 GPAT4Q86UL3 456 aa12.78□□□□□ -0.36
HDLBP-241ENST00000487169 PLXDC1Q8IUK5 500 aa12.78□□□□□ -0.36
HDLBP-241ENST00000487169 ZNF101Q8IZC7 436 aa12.78□□□□□ -0.36
HDLBP-241ENST00000487169 JAGN1Q8N5M9 183 aa12.78□□□□□ -0.36
HDLBP-241ENST00000487169 MDGA1Q8NFP4 955 aa12.78□□□□□ -0.36
HDLBP-241ENST00000487169 PIK3R3Q92569 461 aa12.78□□□□□ -0.36
HDLBP-241ENST00000487169 GATA6Q92908 595 aa12.78□□□□□ -0.36
HDLBP-241ENST00000487169 TRMT2BQ96GJ1 504 aaKnown RBP12.78□□□□□ -0.36
HDLBP-241ENST00000487169 SOX17Q9H6I2 414 aaPredicted RBP12.78□□□□□ -0.36
HDLBP-241ENST00000487169 LDAHQ9H6V9 325 aa12.78□□□□□ -0.36
HDLBP-241ENST00000487169 ARNT2Q9HBZ2 717 aa12.78□□□□□ -0.36
HDLBP-241ENST00000487169 IFT46Q9NQC8 304 aa12.78□□□□□ -0.36
HDLBP-241ENST00000487169 SCML1Q9UN30 329 aa12.78□□□□□ -0.36
HDLBP-241ENST00000487169 TP53I11O14683 189 aa12.78□□□□□ -0.36
HDLBP-241ENST00000487169 KCNJ13O60928 360 aa12.78□□□□□ -0.36
HDLBP-241ENST00000487169 SNAP29O95721 258 aa12.78□□□□□ -0.36
HDLBP-241ENST00000487169 RPA4Q13156 261 aa12.78□□□□□ -0.36
HDLBP-241ENST00000487169 GRM7Q14831 915 aa12.78□□□□□ -0.36
HDLBP-241ENST00000487169 MANEALQ5VSG8 457 aa12.78□□□□□ -0.36
HDLBP-241ENST00000487169 FIGNL1Q6PIW4 674 aa12.78□□□□□ -0.36
HDLBP-241ENST00000487169 RASSF6Q6ZTQ3 369 aa12.78□□□□□ -0.36
HDLBP-241ENST00000487169 NR4A3Q92570 626 aa12.78□□□□□ -0.36
HDLBP-241ENST00000487169 RHBDF1Q96CC6 855 aa12.78□□□□□ -0.36
HDLBP-241ENST00000487169 FBXL8Q96CD0 374 aa12.78□□□□□ -0.36
HDLBP-241ENST00000487169 TMCO6Q96DC7 493 aa12.78□□□□□ -0.36
HDLBP-241ENST00000487169 DNAJA3Q96EY1 480 aa12.78□□□□□ -0.36
HDLBP-241ENST00000487169 NELL2Q99435 816 aa12.78□□□□□ -0.36
HDLBP-241ENST00000487169 KCNK12Q9HB15 430 aa12.78□□□□□ -0.36
HDLBP-241ENST00000487169 C14orf105Q9NVL8 296 aa12.78□□□□□ -0.36
HDLBP-241ENST00000487169 GRHPRQ9UBQ7 328 aa12.78□□□□□ -0.36
HDLBP-241ENST00000487169 CD207Q9UJ71 328 aa12.78□□□□□ -0.36
HDLBP-241ENST00000487169 MKLN1Q9UL63 735 aa12.78□□□□□ -0.36
HDLBP-241ENST00000487169 PORP16435 677 aaPredicted RBP12.78□□□□□ -0.36
HDLBP-241ENST00000487169 ITGB7P26010 798 aa12.78□□□□□ -0.36
HDLBP-241ENST00000487169 RPS3AP61247 264 aaKnown RBP12.78□□□□□ -0.36
HDLBP-241ENST00000487169 CSTF1Q05048 431 aaKnown RBP12.78□□□□□ -0.36
HDLBP-241ENST00000487169 GALNT1Q10472 559 aaPredicted RBP12.78□□□□□ -0.36
HDLBP-241ENST00000487169 FAM180BQ6P0A1 224 aa12.78□□□□□ -0.36
HDLBP-241ENST00000487169 SLC27A4Q6P1M0 643 aa12.78□□□□□ -0.36
HDLBP-241ENST00000487169 OR51G2Q8NGK0 314 aa12.78□□□□□ -0.36
HDLBP-241ENST00000487169 ARRDC2Q8TBH0 407 aa12.78□□□□□ -0.36
HDLBP-241ENST00000487169 ISG20Q96AZ6 181 aaKnown RBP12.78□□□□□ -0.36
HDLBP-241ENST00000487169 CMKLR1Q99788 373 aa12.78□□□□□ -0.36
HDLBP-241ENST00000487169 TMED9Q9BVK6 235 aa12.78□□□□□ -0.36
HDLBP-241ENST00000487169 CXCL16Q9H2A7 254 aa12.78□□□□□ -0.36
HDLBP-241ENST00000487169 OR51I1Q9H343 314 aa12.78□□□□□ -0.36
HDLBP-241ENST00000487169 ZBTB20Q9HC78 741 aaPredicted RBP12.78□□□□□ -0.36
HDLBP-241ENST00000487169 TMEM184CQ9NVA4 438 aa12.78□□□□□ -0.36
HDLBP-241ENST00000487169 C5AR2Q9P296 337 aa12.78□□□□□ -0.36
HDLBP-241ENST00000487169 HIDE1A8MVS5 230 aa12.77□□□□□ -0.36
HDLBP-241ENST00000487169 XPNPEP2O43895 674 aa12.77□□□□□ -0.36
HDLBP-241ENST00000487169 CLDN2P57739 230 aa12.77□□□□□ -0.36
HDLBP-241ENST00000487169 DUS1LQ6P1R4 473 aaKnown RBP12.77□□□□□ -0.36
HDLBP-241ENST00000487169 RNF111Q6ZNA4 994 aa12.77□□□□□ -0.36
HDLBP-241ENST00000487169 PDSS2Q86YH6 399 aa12.77□□□□□ -0.36
HDLBP-241ENST00000487169 PNLDC1Q8NA58 520 aaKnown RBP12.77□□□□□ -0.36
HDLBP-241ENST00000487169 L3HYPDHQ96EM0 354 aa12.77□□□□□ -0.36
HDLBP-241ENST00000487169 PEX11GQ96HA9 241 aa12.77□□□□□ -0.36
HDLBP-241ENST00000487169 G6PC3Q9BUM1 346 aa12.77□□□□□ -0.36
HDLBP-241ENST00000487169 ITPAQ9BY32 194 aa12.77□□□□□ -0.36
HDLBP-241ENST00000487169 PIGUQ9H490 435 aa12.77□□□□□ -0.36
HDLBP-241ENST00000487169 GRIP1Q9Y3R0 1128 aa12.77□□□□□ -0.36
HDLBP-241ENST00000487169 SPTBN2O15020 2390 aa12.77□□□□□ -0.36
HDLBP-241ENST00000487169 A0A1B0GVT2 93 aa12.77□□□□□ -0.37
HDLBP-241ENST00000487169 C11orf98E9PRG8 122 aa12.77□□□□□ -0.37
HDLBP-241ENST00000487169 EIF1AYO14602 144 aaKnown RBP12.77□□□□□ -0.37
HDLBP-241ENST00000487169 SNNO75324 88 aaPredicted RBP12.77□□□□□ -0.37
HDLBP-241ENST00000487169 EEDO75530 441 aaKnown RBP12.77□□□□□ -0.37
HDLBP-241ENST00000487169 CELP19835 753 aa12.77□□□□□ -0.37
HDLBP-241ENST00000487169 RPS3P23396 243 aaKnown RBP eCLIP12.77□□□□□ -0.37
HDLBP-241ENST00000487169 RABIFP47224 123 aa12.77□□□□□ -0.37
HDLBP-241ENST00000487169 RNF144AP50876 292 aaPredicted RBP12.77□□□□□ -0.37
HDLBP-241ENST00000487169 SHC2P98077 582 aa12.77□□□□□ -0.37
HDLBP-241ENST00000487169 PARS2Q7L3T8 475 aaKnown RBP12.77□□□□□ -0.37
HDLBP-241ENST00000487169 KLHDC9Q8NEP7 349 aa12.77□□□□□ -0.37
HDLBP-241ENST00000487169 RLN3Q8WXF3 142 aa12.77□□□□□ -0.37
HDLBP-241ENST00000487169 APIPQ96GX9 242 aa12.77□□□□□ -0.37
HDLBP-241ENST00000487169 PAK6Q9NQU5 681 aaPredicted RBP12.77□□□□□ -0.37
HDLBP-241ENST00000487169 PTBP2Q9UKA9 531 aaKnown RBP12.77□□□□□ -0.37
HDLBP-241ENST00000487169 PLCL2Q9UPR0 1127 aa12.77□□□□□ -0.37
HDLBP-241ENST00000487169 AHCTF1Q8WYP5 2266 aa12.77□□□□□ -0.37
HDLBP-241ENST00000487169 ZNF879B4DU55 563 aa12.77□□□□□ -0.37
HDLBP-241ENST00000487169 ZNF670-ZNF695F2Z2N8 137 aa12.77□□□□□ -0.37
HDLBP-241ENST00000487169 ORC5O43913 435 aa12.77□□□□□ -0.37
HDLBP-241ENST00000487169 PROS1P07225 676 aa12.77□□□□□ -0.37
HDLBP-241ENST00000487169 HK1P19367 917 aa12.77□□□□□ -0.37
HDLBP-241ENST00000487169 PLCXD2Q0VAA5 305 aa12.77□□□□□ -0.37
HDLBP-241ENST00000487169 PDSS1Q5T2R2 415 aa12.77□□□□□ -0.37
HDLBP-241ENST00000487169 RASGEF1AQ8N9B8 481 aa12.77□□□□□ -0.37
HDLBP-241ENST00000487169 OR52P1PQ8NH57 321 aa12.77□□□□□ -0.37
HDLBP-241ENST00000487169 RPLP0P6Q8NHW5 317 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms