RNA–Protein interactions for RNA: ENST00000487017.5

COL7A1-210, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 5,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-210ENST00000487017 AVL9Q8NBF6 648 aa15.76■□□□□ 0.11
COL7A1-210ENST00000487017 SUN3Q8TAQ9 357 aa15.76■□□□□ 0.11
COL7A1-210ENST00000487017 TREM1Q9NP99 234 aa15.76■□□□□ 0.11
COL7A1-210ENST00000487017 GP1BBP13224 206 aa15.76■□□□□ 0.11
COL7A1-210ENST00000487017 EIF1AXP47813 144 aaKnown RBP15.76■□□□□ 0.11
COL7A1-210ENST00000487017 ZNF81P51508 661 aa15.76■□□□□ 0.11
COL7A1-210ENST00000487017 C18orf21Q32NC0 220 aaPredicted RBP15.76■□□□□ 0.11
COL7A1-210ENST00000487017 GXYLT1Q4G148 440 aa15.76■□□□□ 0.11
COL7A1-210ENST00000487017 TLDC1Q6P9B6 456 aa15.76■□□□□ 0.11
COL7A1-210ENST00000487017 GRASPQ7Z6J2 395 aaPredicted RBP15.76■□□□□ 0.11
COL7A1-210ENST00000487017 LRIG1Q96JA1 1093 aa15.76■□□□□ 0.11
COL7A1-210ENST00000487017 NELL2Q99435 816 aa15.76■□□□□ 0.11
COL7A1-210ENST00000487017 BCL7BQ9BQE9 202 aa15.76■□□□□ 0.11
COL7A1-210ENST00000487017 PAAF1Q9BRP4 392 aa15.76■□□□□ 0.11
COL7A1-210ENST00000487017 GSTO2Q9H4Y5 243 aa15.76■□□□□ 0.11
COL7A1-210ENST00000487017 SEC61A2Q9H9S3 476 aa15.76■□□□□ 0.11
COL7A1-210ENST00000487017 SCP2D1Q9UJQ7 156 aa15.76■□□□□ 0.11
COL7A1-210ENST00000487017 PHLPP1O60346 1717 aa15.76■□□□□ 0.11
COL7A1-210ENST00000487017 STC2O76061 302 aa15.76■□□□□ 0.11
COL7A1-210ENST00000487017 FGF4P08620 206 aa15.76■□□□□ 0.11
COL7A1-210ENST00000487017 IL7P13232 177 aa15.76■□□□□ 0.11
COL7A1-210ENST00000487017 ACTC1P68032 377 aa15.76■□□□□ 0.11
COL7A1-210ENST00000487017 ACTA1P68133 377 aa15.76■□□□□ 0.11
COL7A1-210ENST00000487017 ID2Q02363 134 aa15.76■□□□□ 0.11
COL7A1-210ENST00000487017 ZNF550Q7Z398 422 aa15.76■□□□□ 0.11
COL7A1-210ENST00000487017 SLC15A4Q8N697 577 aa15.76■□□□□ 0.11
COL7A1-210ENST00000487017 NUP43Q8NFH3 380 aa15.76■□□□□ 0.11
COL7A1-210ENST00000487017 OR13J1Q8NGT2 312 aa15.76■□□□□ 0.11
COL7A1-210ENST00000487017 GATA6Q92908 595 aa15.76■□□□□ 0.11
COL7A1-210ENST00000487017 CCDC32Q9BV29 185 aa15.76■□□□□ 0.11
COL7A1-210ENST00000487017 GPR62Q9BZJ7 368 aa15.76■□□□□ 0.11
COL7A1-210ENST00000487017 TMEM181Q9P2C4 612 aa15.76■□□□□ 0.11
COL7A1-210ENST00000487017 LIPT1Q9Y234 373 aa15.76■□□□□ 0.11
COL7A1-210ENST00000487017 COL2A1P02458 1487 aaPredicted RBP15.76■□□□□ 0.11
COL7A1-210ENST00000487017 A0A0G2JPF8 293 aa15.76■□□□□ 0.11
COL7A1-210ENST00000487017 ZNF840PA6NDX5 716 aa15.76■□□□□ 0.11
COL7A1-210ENST00000487017 HNRNPCL3B7ZW38 293 aa15.76■□□□□ 0.11
COL7A1-210ENST00000487017 EEF1E1O43324 174 aaKnown RBP15.76■□□□□ 0.11
COL7A1-210ENST00000487017 EMC8O43402 210 aa15.76■□□□□ 0.11
COL7A1-210ENST00000487017 FGF18O76093 207 aa15.76■□□□□ 0.11
COL7A1-210ENST00000487017 ADH1BP00325 375 aa15.76■□□□□ 0.11
COL7A1-210ENST00000487017 HNRNPCL4P0DMR1 293 aa15.76■□□□□ 0.11
COL7A1-210ENST00000487017 MAGEA6P43360 314 aa15.76■□□□□ 0.11
COL7A1-210ENST00000487017 MAGEA8P43361 318 aa15.76■□□□□ 0.11
COL7A1-210ENST00000487017 HTR6P50406 440 aa15.76■□□□□ 0.11
COL7A1-210ENST00000487017 HK3P52790 923 aa15.76■□□□□ 0.11
COL7A1-210ENST00000487017 CES4AQ5XG92 561 aa15.76■□□□□ 0.11
COL7A1-210ENST00000487017 PLEKHG7Q6ZR37 379 aa15.76■□□□□ 0.11
COL7A1-210ENST00000487017 HS3ST5Q8IZT8 346 aa15.76■□□□□ 0.11
COL7A1-210ENST00000487017 OTUB2Q96DC9 234 aa15.76■□□□□ 0.11
COL7A1-210ENST00000487017 TOPAZ1Q8N9V7 1692 aa15.76■□□□□ 0.11
COL7A1-210ENST00000487017 LTBP3Q9NS15 1303 aa15.75■□□□□ 0.11
COL7A1-210ENST00000487017 ARHGEF15O94989 841 aa15.75■□□□□ 0.11
COL7A1-210ENST00000487017 E2F1Q01094 437 aa15.75■□□□□ 0.11
COL7A1-210ENST00000487017 IRF5Q13568 498 aa15.75■□□□□ 0.11
COL7A1-210ENST00000487017 FLYWCH1Q4VC44 716 aa15.75■□□□□ 0.11
COL7A1-210ENST00000487017 SPATC1Q76KD6 591 aa15.75■□□□□ 0.11
COL7A1-210ENST00000487017 HCAR2Q8TDS4 363 aa15.75■□□□□ 0.11
COL7A1-210ENST00000487017 NSMAFQ92636 917 aa15.75■□□□□ 0.11
COL7A1-210ENST00000487017 FEVQ99581 238 aa15.75■□□□□ 0.11
COL7A1-210ENST00000487017 FARSAQ9Y285 508 aaKnown RBP15.75■□□□□ 0.11
COL7A1-210ENST00000487017 FPGSQ05932 587 aa15.75■□□□□ 0.11
COL7A1-210ENST00000487017 EIF2S3LQ2VIR3 472 aaKnown RBP15.75■□□□□ 0.11
COL7A1-210ENST00000487017 C6orf120Q7Z4R8 191 aa15.75■□□□□ 0.11
COL7A1-210ENST00000487017 LHFPL3Q86UP9 236 aa15.75■□□□□ 0.11
COL7A1-210ENST00000487017 TMEM130Q8N3G9 435 aa15.75■□□□□ 0.11
COL7A1-210ENST00000487017 TMIEQ8NEW7 156 aa15.75■□□□□ 0.11
COL7A1-210ENST00000487017 HUS1BQ8NHY5 278 aa15.75■□□□□ 0.11
COL7A1-210ENST00000487017 GATAD2BQ8WXI9 593 aa15.75■□□□□ 0.11
COL7A1-210ENST00000487017 ZC3H10Q96K80 434 aaKnown RBP15.75■□□□□ 0.11
COL7A1-210ENST00000487017 TMEM45AQ9NWC5 275 aa15.75■□□□□ 0.11
COL7A1-210ENST00000487017 GPR83Q9NYM4 423 aa15.75■□□□□ 0.11
COL7A1-210ENST00000487017 CPED1A4D0V7 1026 aa15.75■□□□□ 0.11
COL7A1-210ENST00000487017 OAZ2O95190 189 aa15.75■□□□□ 0.11
COL7A1-210ENST00000487017 FHP07954 510 aa15.75■□□□□ 0.11
COL7A1-210ENST00000487017 KCNC1P48547 511 aa15.75■□□□□ 0.11
COL7A1-210ENST00000487017 PPP5CP53041 499 aa15.75■□□□□ 0.11
COL7A1-210ENST00000487017 S100A10P60903 97 aa15.75■□□□□ 0.11
COL7A1-210ENST00000487017 NCS1P62166 190 aa15.75■□□□□ 0.11
COL7A1-210ENST00000487017 HSD17B12Q53GQ0 312 aa15.75■□□□□ 0.11
COL7A1-210ENST00000487017 SPIN3Q5JUX0 258 aa15.75■□□□□ 0.11
COL7A1-210ENST00000487017 VTCN1Q7Z7D3 282 aa15.75■□□□□ 0.11
COL7A1-210ENST00000487017 AHSA1O95433 338 aa15.75■□□□□ 0.11
COL7A1-210ENST00000487017 NR2C1P13056 603 aa15.75■□□□□ 0.11
COL7A1-210ENST00000487017 ERN2Q76MJ5 926 aaKnown RBP15.75■□□□□ 0.11
COL7A1-210ENST00000487017 CEACAM19Q7Z692 300 aa15.75■□□□□ 0.11
COL7A1-210ENST00000487017 PHC2Q8IXK0 858 aa15.75■□□□□ 0.11
COL7A1-210ENST00000487017 SETD7Q8WTS6 366 aaKnown RBP15.75■□□□□ 0.11
COL7A1-210ENST00000487017 RANBP3Q9H6Z4 567 aaPredicted RBP15.75■□□□□ 0.11
COL7A1-210ENST00000487017 C13orf42A0A1B0GVH6 325 aa15.74■□□□□ 0.11
COL7A1-210ENST00000487017 EIF1AYO14602 144 aaKnown RBP15.74■□□□□ 0.11
COL7A1-210ENST00000487017 MITFO75030 526 aaPredicted RBP15.74■□□□□ 0.11
COL7A1-210ENST00000487017 RFPL2O75678 378 aa15.74■□□□□ 0.11
COL7A1-210ENST00000487017 CD97P48960 835 aa15.74■□□□□ 0.11
COL7A1-210ENST00000487017 PRRT3Q5FWE3 981 aa15.74■□□□□ 0.11
COL7A1-210ENST00000487017 OR5M3Q8NGP4 307 aa15.74■□□□□ 0.11
COL7A1-210ENST00000487017 PTERQ96BW5 349 aa15.74■□□□□ 0.11
COL7A1-210ENST00000487017 ORAI3Q9BRQ5 295 aa15.74■□□□□ 0.11
COL7A1-210ENST00000487017 TLR9Q9NR96 1032 aa15.74■□□□□ 0.11
COL7A1-210ENST00000487017 ERVK13-1Q9NX77 482 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms