RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 AIMP2Q13155 320 aaKnown RBP12.09□□□□□ -0.47
SSR4-211ENST00000486204 NSDHLQ15738 373 aa12.09□□□□□ -0.47
SSR4-211ENST00000486204 TTMPQ5BVD1 217 aa12.09□□□□□ -0.47
SSR4-211ENST00000486204 SCIMPQ6UWF3 145 aa12.09□□□□□ -0.47
SSR4-211ENST00000486204 RNF165Q6ZSG1 346 aa12.09□□□□□ -0.47
SSR4-211ENST00000486204 NDUFAF7Q7L592 441 aa12.09□□□□□ -0.47
SSR4-211ENST00000486204 NUDCD3Q8IVD9 361 aa12.09□□□□□ -0.47
SSR4-211ENST00000486204 ZNF595Q8IYB9 648 aa12.09□□□□□ -0.47
SSR4-211ENST00000486204 GALNT16Q8N428 558 aa12.09□□□□□ -0.47
SSR4-211ENST00000486204 GBP7Q8N8V2 638 aaPredicted RBP12.09□□□□□ -0.47
SSR4-211ENST00000486204 FDCSPQ8NFU4 85 aa12.09□□□□□ -0.47
SSR4-211ENST00000486204 METTL21AQ8WXB1 218 aa12.09□□□□□ -0.47
SSR4-211ENST00000486204 PTCHD1Q96NR3 888 aa12.09□□□□□ -0.47
SSR4-211ENST00000486204 NUDT9Q9BW91 350 aa12.09□□□□□ -0.47
SSR4-211ENST00000486204 TUBB1Q9H4B7 451 aa12.09□□□□□ -0.47
SSR4-211ENST00000486204 ZNF160Q9HCG1 818 aa12.09□□□□□ -0.47
SSR4-211ENST00000486204 PRM3Q9NNZ6 103 aa12.09□□□□□ -0.47
SSR4-211ENST00000486204 KCNK9Q9NPC2 374 aa12.09□□□□□ -0.47
SSR4-211ENST00000486204 RIC8BQ9NVN3 520 aa12.09□□□□□ -0.47
SSR4-211ENST00000486204 LYARQ9NX58 379 aaKnown RBP12.09□□□□□ -0.47
SSR4-211ENST00000486204 VPS29Q9UBQ0 182 aa12.09□□□□□ -0.47
SSR4-211ENST00000486204 ADAM29Q9UKF5 820 aa12.09□□□□□ -0.47
SSR4-211ENST00000486204 FBXW2Q9UKT8 454 aa12.09□□□□□ -0.47
SSR4-211ENST00000486204 ZNF451Q9Y4E5 1061 aa12.09□□□□□ -0.47
SSR4-211ENST00000486204 ATG4BQ9Y4P1 393 aa12.09□□□□□ -0.47
SSR4-211ENST00000486204 CCL27Q9Y4X3 112 aa12.09□□□□□ -0.47
SSR4-211ENST00000486204 APCP25054 2843 aa12.08□□□□□ -0.48
SSR4-211ENST00000486204 NSG1A0A0A6YYJ2 146 aa12.08□□□□□ -0.48
SSR4-211ENST00000486204 A0A1W2PR48 441 aa12.08□□□□□ -0.48
SSR4-211ENST00000486204 WDR91A4D1P6 747 aa12.08□□□□□ -0.48
SSR4-211ENST00000486204 ANKUB1A6NFN9 424 aa12.08□□□□□ -0.48
SSR4-211ENST00000486204 TMEM233B4DJY2 109 aa12.08□□□□□ -0.48
SSR4-211ENST00000486204 PROM1O43490 865 aa12.08□□□□□ -0.48
SSR4-211ENST00000486204 ITM2AO43736 263 aa12.08□□□□□ -0.48
SSR4-211ENST00000486204 PRKRAO75569 313 aaKnown RBP12.08□□□□□ -0.48
SSR4-211ENST00000486204 SEC24DO94855 1032 aaPredicted RBP12.08□□□□□ -0.48
SSR4-211ENST00000486204 CELA2AP08217 269 aa12.08□□□□□ -0.48
SSR4-211ENST00000486204 FGF4P08620 206 aa12.08□□□□□ -0.48
SSR4-211ENST00000486204 FAM58BPP0C7Q3 252 aa12.08□□□□□ -0.48
SSR4-211ENST00000486204 CPN2P22792 545 aa12.08□□□□□ -0.48
SSR4-211ENST00000486204 RAE1P78406 368 aaKnown RBP12.08□□□□□ -0.48
SSR4-211ENST00000486204 IGLV3-21P80748 117 aaPredicted RBP12.08□□□□□ -0.48
SSR4-211ENST00000486204 ELOAQ14241 798 aaKnown RBP12.08□□□□□ -0.48
SSR4-211ENST00000486204 UGT3A2Q3SY77 523 aa12.08□□□□□ -0.48
SSR4-211ENST00000486204 SFT2D3Q587I9 215 aa12.08□□□□□ -0.48
SSR4-211ENST00000486204 C18orf63Q68DL7 685 aa12.08□□□□□ -0.48
SSR4-211ENST00000486204 TRIM46Q7Z4K8 759 aa12.08□□□□□ -0.48
SSR4-211ENST00000486204 GPR180Q86V85 440 aa12.08□□□□□ -0.48
SSR4-211ENST00000486204 C1orf52Q8N6N3 182 aaKnown RBP12.08□□□□□ -0.48
SSR4-211ENST00000486204 ANKRD42Q8N9B4 389 aa12.08□□□□□ -0.48
SSR4-211ENST00000486204 CLEC1AQ8NC01 280 aa12.08□□□□□ -0.48
SSR4-211ENST00000486204 CHTF18Q8WVB6 975 aa12.08□□□□□ -0.48
SSR4-211ENST00000486204 APIPQ96GX9 242 aa12.08□□□□□ -0.48
SSR4-211ENST00000486204 VPS50Q96JG6 964 aa12.08□□□□□ -0.48
SSR4-211ENST00000486204 ATP6V1G3Q96LB4 118 aa12.08□□□□□ -0.48
SSR4-211ENST00000486204 TUBB6Q9BUF5 446 aa12.08□□□□□ -0.48
SSR4-211ENST00000486204 C20orf27Q9GZN8 174 aa12.08□□□□□ -0.48
SSR4-211ENST00000486204 ATP13A2Q9NQ11 1180 aa12.08□□□□□ -0.48
SSR4-211ENST00000486204 PRTFDC1Q9NRG1 225 aa12.08□□□□□ -0.48
SSR4-211ENST00000486204 ZNF446Q9NWS9 450 aa12.08□□□□□ -0.48
SSR4-211ENST00000486204 TEX10Q9NXF1 929 aaPredicted RBP12.08□□□□□ -0.48
SSR4-211ENST00000486204 C19orf25Q9UFG5 118 aaPredicted RBP12.08□□□□□ -0.48
SSR4-211ENST00000486204 PHF11Q9UIL8 331 aa12.08□□□□□ -0.48
SSR4-211ENST00000486204 MRPS33Q9Y291 106 aaKnown RBP12.08□□□□□ -0.48
SSR4-211ENST00000486204 PCDHGB7Q9Y5F8 929 aa12.08□□□□□ -0.48
SSR4-211ENST00000486204 DNAJC15Q9Y5T4 150 aa12.08□□□□□ -0.48
SSR4-211ENST00000486204 PTGDR2Q9Y5Y4 395 aa12.08□□□□□ -0.48
SSR4-211ENST00000486204 PDZD2O15018 2839 aa12.07□□□□□ -0.48
SSR4-211ENST00000486204 NPIPB8E9PQR5 432 aa12.07□□□□□ -0.48
SSR4-211ENST00000486204 CTNSO60931 367 aa12.07□□□□□ -0.48
SSR4-211ENST00000486204 LDB3O75112 727 aa12.07□□□□□ -0.48
SSR4-211ENST00000486204 LYPLA1O75608 230 aaPredicted RBP12.07□□□□□ -0.48
SSR4-211ENST00000486204 AIFM1O95831 613 aa12.07□□□□□ -0.48
SSR4-211ENST00000486204 SERPINE1P05121 402 aa12.07□□□□□ -0.48
SSR4-211ENST00000486204 KLK1P06870 262 aa12.07□□□□□ -0.48
SSR4-211ENST00000486204 BGNP21810 368 aa12.07□□□□□ -0.48
SSR4-211ENST00000486204 PRPH2P23942 346 aa12.07□□□□□ -0.48
SSR4-211ENST00000486204 PPP2R1BP30154 601 aa12.07□□□□□ -0.48
SSR4-211ENST00000486204 SLC13A2Q13183 592 aa12.07□□□□□ -0.48
SSR4-211ENST00000486204 MYBPC3Q14896 1274 aa12.07□□□□□ -0.48
SSR4-211ENST00000486204 CHI3L2Q15782 390 aa12.07□□□□□ -0.48
SSR4-211ENST00000486204 PAPD4Q6PIY7 484 aaKnown RBP12.07□□□□□ -0.48
SSR4-211ENST00000486204 CLNKQ7Z7G1 428 aa12.07□□□□□ -0.48
SSR4-211ENST00000486204 PARP9Q8IXQ6 854 aa12.07□□□□□ -0.48
SSR4-211ENST00000486204 OR2T11Q8NH01 316 aa12.07□□□□□ -0.48
SSR4-211ENST00000486204 PSMF1Q92530 271 aa12.07□□□□□ -0.48
SSR4-211ENST00000486204 UCN3Q969E3 161 aa12.07□□□□□ -0.48
SSR4-211ENST00000486204 PNPLA2Q96AD5 504 aa12.07□□□□□ -0.48
SSR4-211ENST00000486204 ANKRD9Q96BM1 317 aaPredicted RBP12.07□□□□□ -0.48
SSR4-211ENST00000486204 SNRNP40Q96DI7 357 aaKnown RBP12.07□□□□□ -0.48
SSR4-211ENST00000486204 SORT1Q99523 831 aa12.07□□□□□ -0.48
SSR4-211ENST00000486204 SMAD5Q99717 465 aaKnown RBP12.07□□□□□ -0.48
SSR4-211ENST00000486204 ZNF552Q9H707 407 aaPredicted RBP12.07□□□□□ -0.48
SSR4-211ENST00000486204 ZNF395Q9H8N7 513 aaPredicted RBP12.07□□□□□ -0.48
SSR4-211ENST00000486204 NMRK1Q9NWW6 199 aa12.07□□□□□ -0.48
SSR4-211ENST00000486204 SIRT5Q9NXA8 310 aa12.07□□□□□ -0.48
SSR4-211ENST00000486204 MS4A12Q9NXJ0 267 aa12.07□□□□□ -0.48
SSR4-211ENST00000486204 GPR83Q9NYM4 423 aa12.07□□□□□ -0.48
SSR4-211ENST00000486204 AHSPQ9NZD4 102 aa12.07□□□□□ -0.48
SSR4-211ENST00000486204 SPACA6W5XKT8 324 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms