RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 PTX3P26022 381 aaPredicted RBP5.35□□□□□ -1.55
CUX1-208ENST00000485792 CERS1P27544 350 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 GSTT1P30711 240 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 HPDP32754 393 aaPredicted RBP5.35□□□□□ -1.55
CUX1-208ENST00000485792 PTGER1P34995 402 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 SLCO1A2P46721 670 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 PGDP52209 483 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 MTTPP55157 894 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 HNRNPH2P55795 449 aaKnown RBP5.35□□□□□ -1.55
CUX1-208ENST00000485792 RAB38P57729 211 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 DNAJB13P59910 316 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 RAB8AP61006 207 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 NAA20P61599 178 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 BTG2P78543 158 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 EEF1A2Q05639 463 aaKnown RBP5.35□□□□□ -1.55
CUX1-208ENST00000485792 ZNF33BQ06732 778 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 GALNT1Q10472 559 aaPredicted RBP5.35□□□□□ -1.55
CUX1-208ENST00000485792 NFATC3Q12968 1075 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 DUSP8Q13202 625 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 RBBP5Q15291 538 aaKnown RBP5.35□□□□□ -1.55
CUX1-208ENST00000485792 RBBP7Q16576 425 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 ERCC6LQ2NKX8 1250 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 PLEKHN1Q494U1 663 aaPredicted RBP5.35□□□□□ -1.55
CUX1-208ENST00000485792 TOR1AIP1Q5JTV8 583 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 ZNF678Q5SXM1 525 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 B3GNTL1Q67FW5 361 aaPredicted RBP5.35□□□□□ -1.55
CUX1-208ENST00000485792 ZNF324BQ6AW86 544 aaPredicted RBP5.35□□□□□ -1.55
CUX1-208ENST00000485792 FAAH2Q6GMR7 532 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 MED27Q6P2C8 311 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 GALNT18Q6P9A2 607 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 ZNF605Q86T29 641 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 TRABD2AQ86V40 505 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 ZNF595Q8IYB9 648 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 LGI4Q8N135 537 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 RIBC1Q8N443 379 aaPredicted RBP5.35□□□□□ -1.55
CUX1-208ENST00000485792 KIF2BQ8N4N8 673 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 TEX9Q8N6V9 391 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 PTGR2Q8N8N7 351 aaPredicted RBP5.35□□□□□ -1.55
CUX1-208ENST00000485792 ACOT4Q8N9L9 421 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 BANPQ8N9N5 519 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 CLEC1AQ8NC01 280 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 SIMC1Q8NDZ2 872 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.35□□□□□ -1.55
CUX1-208ENST00000485792 TRPC4APQ8TEL6 797 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 PPP4R1Q8TF05 950 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 MIB2Q96AX9 1013 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 NTNG2Q96CW9 530 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 CMTM7Q96FZ5 175 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 PEX11GQ96HA9 241 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 VPS50Q96JG6 964 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 KCNC2Q96PR1 638 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 F2RL3Q96RI0 385 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 KCNA7Q96RP8 456 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 ZNF382Q96SR6 550 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 HBEGFQ99075 208 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 PARD6BQ9BYG5 372 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 REXO4Q9GZR2 422 aaKnown RBP5.35□□□□□ -1.55
CUX1-208ENST00000485792 VPS11Q9H270 941 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 CLEC4MQ9H2X3 399 aaPredicted RBP5.35□□□□□ -1.55
CUX1-208ENST00000485792 GSTO2Q9H4Y5 243 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 BRF2Q9HAW0 419 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 MMP25Q9NPA2 562 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 DMRT3Q9NQL9 472 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 RIC8BQ9NVN3 520 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 OXSMQ9NWU1 459 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 IRAK4Q9NWZ3 460 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 VTI1BQ9UEU0 232 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 TRPS1Q9UHF7 1281 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 ADAM29Q9UKF5 820 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 GRID1Q9ULK0 1009 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 CCL27Q9Y4X3 112 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 ASB4Q9Y574 426 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 IKBKGQ9Y6K9 419 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 NAV2Q8IVL1 2488 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 PKDREJQ9NTG1 2253 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 NSG1A0A0A6YYJ2 146 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 FAM229AH3BQW9 127 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 HRKO00198 91 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 SAP18O00422 153 aaKnown RBP5.34□□□□□ -1.55
CUX1-208ENST00000485792 ADAM10O14672 748 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 ERI3O43414 337 aaKnown RBP5.34□□□□□ -1.55
CUX1-208ENST00000485792 PROM1O43490 865 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 TYROBPO43914 113 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 DPM1O60762 260 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 EEDO75530 441 aaKnown RBP5.34□□□□□ -1.55
CUX1-208ENST00000485792 S100BP04271 92 aaPredicted RBP5.34□□□□□ -1.55
CUX1-208ENST00000485792 IGKV3-11P04433 115 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 TUBBP07437 444 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 HEXBP07686 556 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 ITGAMP11215 1152 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 ESRRAP11474 423 aaPredicted RBP5.34□□□□□ -1.55
CUX1-208ENST00000485792 GFAPP14136 432 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 MAOAP21397 527 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 JAK1P23458 1154 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 ATP5F1P24539 256 aaPredicted RBP5.34□□□□□ -1.55
CUX1-208ENST00000485792 TPP2P29144 1249 aaPredicted RBP5.34□□□□□ -1.55
CUX1-208ENST00000485792 EEF1DP29692 281 aaKnown RBP5.34□□□□□ -1.55
CUX1-208ENST00000485792 GALNSP34059 522 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 TRHRP34981 398 aaPredicted RBP5.34□□□□□ -1.55
CUX1-208ENST00000485792 ETV4P43268 484 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms