RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 UMODP07911 640 aa14.87□□□□□ -0.03
APOE-205ENST00000485628 CD63P08962 238 aa14.87□□□□□ -0.03
APOE-205ENST00000485628 CCNYL3P0C7X3 344 aa14.87□□□□□ -0.03
APOE-205ENST00000485628 LAMP1P11279 417 aa14.87□□□□□ -0.03
APOE-205ENST00000485628 F8A1P23610 371 aa14.87□□□□□ -0.03
APOE-205ENST00000485628 RPL3P39023 403 aaKnown RBP14.87□□□□□ -0.03
APOE-205ENST00000485628 SRSF11Q05519 484 aaKnown RBP14.87□□□□□ -0.03
APOE-205ENST00000485628 BIKQ13323 160 aa14.87□□□□□ -0.03
APOE-205ENST00000485628 UBAP2LQ14157 1087 aaKnown RBP14.87□□□□□ -0.03
APOE-205ENST00000485628 TMEM205Q6UW68 189 aa14.87□□□□□ -0.03
APOE-205ENST00000485628 C6orf89Q6UWU4 347 aa14.87□□□□□ -0.03
APOE-205ENST00000485628 TICAM1Q8IUC6 712 aa14.87□□□□□ -0.03
APOE-205ENST00000485628 FITM2Q8N6M3 262 aa14.87□□□□□ -0.03
APOE-205ENST00000485628 SUN3Q8TAQ9 357 aa14.87□□□□□ -0.03
APOE-205ENST00000485628 GFM2Q969S9 779 aaKnown RBP14.87□□□□□ -0.03
APOE-205ENST00000485628 MIEF2Q96C03 454 aa14.87□□□□□ -0.03
APOE-205ENST00000485628 GPR87Q9BY21 358 aa14.87□□□□□ -0.03
APOE-205ENST00000485628 SLAMF7Q9NQ25 335 aa14.87□□□□□ -0.03
APOE-205ENST00000485628 SLC35C2Q9NQQ7 365 aa14.87□□□□□ -0.03
APOE-205ENST00000485628 NECTIN3Q9NQS3 549 aa14.87□□□□□ -0.03
APOE-205ENST00000485628 C5AR2Q9P296 337 aa14.87□□□□□ -0.03
APOE-205ENST00000485628 NXT1Q9UKK6 140 aaKnown RBP14.87□□□□□ -0.03
APOE-205ENST00000485628 NUP214P35658 2090 aaPredicted RBP14.87□□□□□ -0.03
APOE-205ENST00000485628 ASPMQ8IZT6 3477 aa14.87□□□□□ -0.03
APOE-205ENST00000485628 LOC101059948A0A1B0GTJ6 334 aa14.86□□□□□ -0.03
APOE-205ENST00000485628 A0A1W2PS29 197 aa14.86□□□□□ -0.03
APOE-205ENST00000485628 TCRBV16S1A1N1A0A5B0 115 aa14.86□□□□□ -0.03
APOE-205ENST00000485628 ASPDHA6ND91 283 aa14.86□□□□□ -0.03
APOE-205ENST00000485628 CLDN4O14493 209 aa14.86□□□□□ -0.03
APOE-205ENST00000485628 DCTN3O75935 186 aa14.86□□□□□ -0.03
APOE-205ENST00000485628 IL6P05231 212 aa14.86□□□□□ -0.03
APOE-205ENST00000485628 LIPCP11150 499 aa14.86□□□□□ -0.03
APOE-205ENST00000485628 TCN2P20062 427 aa14.86□□□□□ -0.03
APOE-205ENST00000485628 PIK3R1P27986 724 aa14.86□□□□□ -0.03
APOE-205ENST00000485628 GALNSP34059 522 aa14.86□□□□□ -0.03
APOE-205ENST00000485628 POLR2JP52435 117 aaKnown RBP14.86□□□□□ -0.03
APOE-205ENST00000485628 NME5P56597 212 aa14.86□□□□□ -0.03
APOE-205ENST00000485628 FOXL2P58012 376 aa14.86□□□□□ -0.03
APOE-205ENST00000485628 STX1BP61266 288 aa14.86□□□□□ -0.03
APOE-205ENST00000485628 FOLH1Q04609 750 aa14.86□□□□□ -0.03
APOE-205ENST00000485628 OCA2Q04671 838 aa14.86□□□□□ -0.03
APOE-205ENST00000485628 DUSP2Q05923 314 aa14.86□□□□□ -0.03
APOE-205ENST00000485628 MLC1Q15049 377 aa14.86□□□□□ -0.03
APOE-205ENST00000485628 RPS6KA2Q15349 733 aa14.86□□□□□ -0.03
APOE-205ENST00000485628 TLR1Q15399 786 aa14.86□□□□□ -0.03
APOE-205ENST00000485628 TERF2Q15554 542 aa14.86□□□□□ -0.03
APOE-205ENST00000485628 SPANXN4Q5MJ08 99 aa14.86□□□□□ -0.03
APOE-205ENST00000485628 NATD1Q8N6N6 113 aa14.86□□□□□ -0.03
APOE-205ENST00000485628 OR4K14Q8NGD5 310 aa14.86□□□□□ -0.03
APOE-205ENST00000485628 OR2Y1Q8NGV0 311 aa14.86□□□□□ -0.03
APOE-205ENST00000485628 PSMA8Q8TAA3 256 aa14.86□□□□□ -0.03
APOE-205ENST00000485628 GATA6Q92908 595 aa14.86□□□□□ -0.03
APOE-205ENST00000485628 LRRC37BQ96QE4 947 aa14.86□□□□□ -0.03
APOE-205ENST00000485628 TRIM4Q9C037 500 aa14.86□□□□□ -0.03
APOE-205ENST00000485628 BHLHE41Q9C0J9 482 aaPredicted RBP14.86□□□□□ -0.03
APOE-205ENST00000485628 WDR41Q9HAD4 459 aa14.86□□□□□ -0.03
APOE-205ENST00000485628 SERHLQ9NQF3 203 aa14.86□□□□□ -0.03
APOE-205ENST00000485628 PRTFDC1Q9NRG1 225 aa14.86□□□□□ -0.03
APOE-205ENST00000485628 ACSS1Q9NUB1 689 aaPredicted RBP14.86□□□□□ -0.03
APOE-205ENST00000485628 ARMCX1Q9P291 453 aa14.86□□□□□ -0.03
APOE-205ENST00000485628 CROTQ9UKG9 612 aa14.86□□□□□ -0.03
APOE-205ENST00000485628 UTS2RQ9UKP6 389 aa14.86□□□□□ -0.03
APOE-205ENST00000485628 MRPS33Q9Y291 106 aaKnown RBP14.86□□□□□ -0.03
APOE-205ENST00000485628 AK5Q9Y6K8 562 aa14.86□□□□□ -0.03
APOE-205ENST00000485628 LOC102723996A0A087X1L8 192 aa14.85□□□□□ -0.03
APOE-205ENST00000485628 DYTNA2CJ06 578 aa14.85□□□□□ -0.03
APOE-205ENST00000485628 C9J4A7 227 aa14.85□□□□□ -0.03
APOE-205ENST00000485628 B4GALT2O60909 372 aa14.85□□□□□ -0.03
APOE-205ENST00000485628 LDB3O75112 727 aa14.85□□□□□ -0.03
APOE-205ENST00000485628 PGRP06401 933 aa14.85□□□□□ -0.03
APOE-205ENST00000485628 CAPN3P20807 821 aa14.85□□□□□ -0.03
APOE-205ENST00000485628 PTPN4P29074 926 aa14.85□□□□□ -0.03
APOE-205ENST00000485628 PPP2R1BP30154 601 aa14.85□□□□□ -0.03
APOE-205ENST00000485628 HPCAL1P37235 193 aa14.85□□□□□ -0.03
APOE-205ENST00000485628 FAM174BQ3ZCQ3 159 aa14.85□□□□□ -0.03
APOE-205ENST00000485628 AGKQ53H12 422 aa14.85□□□□□ -0.03
APOE-205ENST00000485628 CPTPQ5TA50 214 aa14.85□□□□□ -0.03
APOE-205ENST00000485628 MLIPQ5VWP3 458 aa14.85□□□□□ -0.03
APOE-205ENST00000485628 ANKRD26P1Q6NSI1 321 aa14.85□□□□□ -0.03
APOE-205ENST00000485628 MSANTD1Q6ZTZ1 278 aa14.85□□□□□ -0.03
APOE-205ENST00000485628 ENDOVQ8N8Q3 282 aaKnown RBP14.85□□□□□ -0.03
APOE-205ENST00000485628 C7orf57Q8NEG2 295 aa14.85□□□□□ -0.03
APOE-205ENST00000485628 NACC2Q96BF6 587 aa14.85□□□□□ -0.03
APOE-205ENST00000485628 PPCDCQ96CD2 204 aa14.85□□□□□ -0.03
APOE-205ENST00000485628 CTHRC1Q96CG8 243 aa14.85□□□□□ -0.03
APOE-205ENST00000485628 PRPF18Q99633 342 aaKnown RBP14.85□□□□□ -0.03
APOE-205ENST00000485628 RBCK1Q9BYM8 510 aa14.85□□□□□ -0.03
APOE-205ENST00000485628 CCDC167Q9P0B6 97 aa14.85□□□□□ -0.03
APOE-205ENST00000485628 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.85□□□□□ -0.03
APOE-205ENST00000485628 PSME2Q9UL46 239 aa14.85□□□□□ -0.03
APOE-205ENST00000485628 TCFL5Q9UL49 500 aa14.85□□□□□ -0.03
APOE-205ENST00000485628 FARSAQ9Y285 508 aaKnown RBP14.85□□□□□ -0.03
APOE-205ENST00000485628 CEP295Q9C0D2 2601 aa14.85□□□□□ -0.03
APOE-205ENST00000485628 NCOR2Q9Y618 2525 aa14.84□□□□□ -0.03
APOE-205ENST00000485628 SYNDIG1LA6NDD5 238 aa14.84□□□□□ -0.03
APOE-205ENST00000485628 IDSB3KWA1 339 aa14.84□□□□□ -0.03
APOE-205ENST00000485628 C9JVG2 144 aa14.84□□□□□ -0.03
APOE-205ENST00000485628 RNASET2O00584 256 aaKnown RBP14.84□□□□□ -0.03
APOE-205ENST00000485628 FBP2O00757 339 aa14.84□□□□□ -0.03
APOE-205ENST00000485628 CDC123O75794 336 aaPredicted RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms