RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 E9PBE3 544 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 E9PLN8 166 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 F8VZ95 297 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 F8WDY8 70 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 E2F3O00716 465 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 RAD51BO15315 384 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 NKX2-8O15522 239 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 BUB1O43683 1085 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 NDUFS3O75489 264 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 ZNF821O75541 412 aaPredicted RBP6.23□□□□□ -1.41
CLK1-212ENST00000482590 ZMPSTE24O75844 475 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 TM7SF2O76062 418 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 HGFP14210 728 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 PLA2G2AP14555 144 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 UCHL3P15374 230 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 VCLP18206 1134 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 TGM2P21980 687 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 GSTM5P46439 218 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 MTNR1AP48039 350 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 KCNJ1P48048 391 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 VPS41P49754 854 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 BLKP51451 505 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 CLCNKAP51800 687 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 RAP2BP61225 183 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 RHOAP61586 193 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 UBE2HP62256 183 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 ACY1Q03154 408 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 RAPSNQ13702 412 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 DDX39BQ13838 428 aaKnown RBP6.23□□□□□ -1.41
CLK1-212ENST00000482590 ACOX1Q15067 660 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 PTCHD3Q3KNS1 767 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 FASTKD1Q53R41 847 aaKnown RBP6.23□□□□□ -1.41
CLK1-212ENST00000482590 TCTE1Q5JU00 501 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 ATG9BQ674R7 924 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 GUSBP11Q6P575 273 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 METAP1DQ6UB28 335 aaPredicted RBP6.23□□□□□ -1.41
CLK1-212ENST00000482590 MACC1Q6ZN28 852 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 ARCQ7LC44 396 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 STRADAQ7RTN6 431 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 VPS36Q86VN1 386 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 AMZ2Q86W34 360 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 ZNF677Q86XU0 584 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 ZNF679Q8IYX0 411 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 BBS5Q8N3I7 341 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 EMC1Q8N766 993 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 ZNF671Q8TAW3 534 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 RAPGEF5Q92565 580 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 SGCDQ92629 289 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 NAT6Q93015 286 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 ISG20Q96AZ6 181 aaKnown RBP6.23□□□□□ -1.41
CLK1-212ENST00000482590 NACC2Q96BF6 587 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 RNF31Q96EP0 1072 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 C14orf79Q96F83 325 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 ELMOD3Q96FG2 381 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 KLHL32Q96NJ5 620 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 VKORC1Q9BQB6 163 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 BCL7BQ9BQE9 202 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 C11orf70Q9BRQ4 267 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 OSBPL8Q9BZF1 889 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 RTN4RQ9BZR6 473 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 LRRC40Q9H9A6 602 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 CPNE5Q9HCH3 593 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 ASCL3Q9NQ33 180 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 C20orf141Q9NUB4 165 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 MRPS18AQ9NVS2 196 aaKnown RBP6.23□□□□□ -1.41
CLK1-212ENST00000482590 TMEM248Q9NWD8 314 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 P4HTMQ9NXG6 502 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 SMPD3Q9NY59 655 aaPredicted RBP6.23□□□□□ -1.41
CLK1-212ENST00000482590 ABI3Q9P2A4 366 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 OR12D3Q9UGF7 316 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 EXO1Q9UQ84 846 aaKnown RBP6.23□□□□□ -1.41
CLK1-212ENST00000482590 PLEKHA6Q9Y2H5 1048 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 UBE2J1Q9Y385 318 aaPredicted RBP6.23□□□□□ -1.41
CLK1-212ENST00000482590 SDK2Q58EX2 2172 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 LY6G6EA0A0G2JKS1 128 aa6.22□□□□□ -1.41
CLK1-212ENST00000482590 IGLON5A6NGN9 336 aa6.22□□□□□ -1.41
CLK1-212ENST00000482590 FOXO6A8MYZ6 492 aa6.22□□□□□ -1.41
CLK1-212ENST00000482590 CASC3O15234 703 aaKnown RBP6.22□□□□□ -1.41
CLK1-212ENST00000482590 HCRTR2O43614 444 aa6.22□□□□□ -1.41
CLK1-212ENST00000482590 TMCC1O94876 653 aa6.22□□□□□ -1.41
CLK1-212ENST00000482590 CD160O95971 181 aa6.22□□□□□ -1.41
CLK1-212ENST00000482590 CHRM4P08173 479 aa6.22□□□□□ -1.41
CLK1-212ENST00000482590 ALPIP09923 528 aa6.22□□□□□ -1.41
CLK1-212ENST00000482590 CTSEP14091 401 aa6.22□□□□□ -1.41
CLK1-212ENST00000482590 AREGP15514 252 aa6.22□□□□□ -1.41
CLK1-212ENST00000482590 PTPN4P29074 926 aa6.22□□□□□ -1.41
CLK1-212ENST00000482590 GKP32189 559 aa6.22□□□□□ -1.41
CLK1-212ENST00000482590 PTPN9P43378 593 aa6.22□□□□□ -1.41
CLK1-212ENST00000482590 NSFP46459 744 aaKnown RBP6.22□□□□□ -1.41
CLK1-212ENST00000482590 PGDP52209 483 aa6.22□□□□□ -1.41
CLK1-212ENST00000482590 UCP2P55851 309 aa6.22□□□□□ -1.41
CLK1-212ENST00000482590 PFN3P60673 137 aa6.22□□□□□ -1.41
CLK1-212ENST00000482590 C1orf61Q13536 156 aa6.22□□□□□ -1.41
CLK1-212ENST00000482590 RUNX2Q13950 521 aa6.22□□□□□ -1.41
CLK1-212ENST00000482590 EFTUD2Q15029 972 aaKnown RBP eCLIP6.22□□□□□ -1.41
CLK1-212ENST00000482590 ELOCQ15369 112 aa6.22□□□□□ -1.41
CLK1-212ENST00000482590 CYP2A13Q16696 494 aa6.22□□□□□ -1.41
CLK1-212ENST00000482590 KCTD21Q4G0X4 260 aa6.22□□□□□ -1.41
CLK1-212ENST00000482590 LRRC73Q5JTD7 316 aa6.22□□□□□ -1.41
CLK1-212ENST00000482590 TRNP1Q6NT89 227 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms