RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 PPP2R1BP30154 601 aa25.09■■□□□ 1.61
CCM2-211ENST00000478582 CCL11P51671 97 aa25.09■■□□□ 1.61
CCM2-211ENST00000478582 IGLV3-21P80748 117 aaPredicted RBP25.09■■□□□ 1.61
CCM2-211ENST00000478582 CHAF1BQ13112 559 aa25.09■■□□□ 1.61
CCM2-211ENST00000478582 SERTAD2Q14140 314 aa25.09■■□□□ 1.61
CCM2-211ENST00000478582 NDUFAF5Q5TEU4 345 aa25.09■■□□□ 1.61
CCM2-211ENST00000478582 ZNF160Q9HCG1 818 aa25.09■■□□□ 1.61
CCM2-211ENST00000478582 MED4Q9NPJ6 270 aa25.09■■□□□ 1.61
CCM2-211ENST00000478582 INTS9Q9NV88 658 aaKnown RBP25.09■■□□□ 1.61
CCM2-211ENST00000478582 MYO1DO94832 1006 aa25.08■■□□□ 1.61
CCM2-211ENST00000478582 ICAM2P13598 275 aa25.08■■□□□ 1.61
CCM2-211ENST00000478582 OCRLQ01968 901 aa25.08■■□□□ 1.61
CCM2-211ENST00000478582 ACTN3Q08043 901 aaPredicted RBP25.08■■□□□ 1.61
CCM2-211ENST00000478582 NR6A1Q15406 480 aa25.08■■□□□ 1.61
CCM2-211ENST00000478582 CLNKQ7Z7G1 428 aa25.08■■□□□ 1.61
CCM2-211ENST00000478582 FCRL1Q96LA6 429 aa25.08■■□□□ 1.61
CCM2-211ENST00000478582 LPAR4Q99677 370 aa25.08■■□□□ 1.61
CCM2-211ENST00000478582 ALOXE3Q9BYJ1 711 aa25.08■■□□□ 1.61
CCM2-211ENST00000478582 WBP11Q9Y2W2 641 aaKnown RBP25.08■■□□□ 1.61
CCM2-211ENST00000478582 TMED5Q9Y3A6 229 aa25.08■■□□□ 1.61
CCM2-211ENST00000478582 PCDHGA9Q9Y5G4 932 aaKnown RBP25.08■■□□□ 1.61
CCM2-211ENST00000478582 PCDHA9Q9Y5H5 950 aa25.08■■□□□ 1.61
CCM2-211ENST00000478582 IGHV3-20A0A0C4DH32 117 aa25.07■■□□□ 1.6
CCM2-211ENST00000478582 GNG14A0A1W2PPG7 69 aa25.07■■□□□ 1.6
CCM2-211ENST00000478582 C1orf226A1L170 272 aa25.07■■□□□ 1.6
CCM2-211ENST00000478582 MASP2O00187 686 aa25.07■■□□□ 1.6
CCM2-211ENST00000478582 FGF17O60258 216 aa25.07■■□□□ 1.6
CCM2-211ENST00000478582 LDB3O75112 727 aa25.07■■□□□ 1.6
CCM2-211ENST00000478582 PRKRAO75569 313 aaKnown RBP25.07■■□□□ 1.6
CCM2-211ENST00000478582 ANXA4P09525 319 aaPredicted RBP25.07■■□□□ 1.6
CCM2-211ENST00000478582 Q0VFX4 171 aa25.07■■□□□ 1.6
CCM2-211ENST00000478582 STX4Q12846 297 aa25.07■■□□□ 1.6
CCM2-211ENST00000478582 TERF2Q15554 542 aa25.07■■□□□ 1.6
CCM2-211ENST00000478582 HSP90B2PQ58FF3 399 aa25.07■■□□□ 1.6
CCM2-211ENST00000478582 OR52E8Q6IFG1 317 aa25.07■■□□□ 1.6
CCM2-211ENST00000478582 NOXRED1Q6NXP6 359 aa25.07■■□□□ 1.6
CCM2-211ENST00000478582 PAPD4Q6PIY7 484 aaKnown RBP25.07■■□□□ 1.6
CCM2-211ENST00000478582 ASB18Q6ZVZ8 466 aa25.07■■□□□ 1.6
CCM2-211ENST00000478582 GALNT16Q8N428 558 aa25.07■■□□□ 1.6
CCM2-211ENST00000478582 DNAJB14Q8TBM8 379 aa25.07■■□□□ 1.6
CCM2-211ENST00000478582 C16orf78Q8WTQ4 265 aa25.07■■□□□ 1.6
CCM2-211ENST00000478582 PPP3R2Q96LZ3 170 aa25.07■■□□□ 1.6
CCM2-211ENST00000478582 C3orf30Q96M34 536 aa25.07■■□□□ 1.6
CCM2-211ENST00000478582 FAIM2Q9BWQ8 316 aa25.07■■□□□ 1.6
CCM2-211ENST00000478582 PNPOQ9NVS9 261 aa25.07■■□□□ 1.6
CCM2-211ENST00000478582 VTI1BQ9UEU0 232 aa25.07■■□□□ 1.6
CCM2-211ENST00000478582 PGRMC2O15173 223 aa25.06■■□□□ 1.6
CCM2-211ENST00000478582 SKAP2O75563 359 aaPredicted RBP25.06■■□□□ 1.6
CCM2-211ENST00000478582 SEC24DO94855 1032 aaPredicted RBP25.06■■□□□ 1.6
CCM2-211ENST00000478582 GPR75O95800 540 aa25.06■■□□□ 1.6
CCM2-211ENST00000478582 KLRB1Q12918 225 aa25.06■■□□□ 1.6
CCM2-211ENST00000478582 RFTN2Q52LD8 501 aaPredicted RBP25.06■■□□□ 1.6
CCM2-211ENST00000478582 PLAG1Q6DJT9 500 aa25.06■■□□□ 1.6
CCM2-211ENST00000478582 RIPOR1Q6ZS17 1223 aa25.06■■□□□ 1.6
CCM2-211ENST00000478582 PUM2Q8TB72 1066 aaKnown RBP eCLIP25.06■■□□□ 1.6
CCM2-211ENST00000478582 C19orf60Q96EN9 201 aa25.06■■□□□ 1.6
CCM2-211ENST00000478582 SLC25A23Q9BV35 468 aa25.06■■□□□ 1.6
CCM2-211ENST00000478582 ADAP2Q9NPF8 381 aa25.06■■□□□ 1.6
CCM2-211ENST00000478582 CES1P1Q9UKY3 287 aa25.06■■□□□ 1.6
CCM2-211ENST00000478582 GLOD5A6NK44 160 aa25.05■■□□□ 1.6
CCM2-211ENST00000478582 DYNC1I1O14576 645 aa25.05■■□□□ 1.6
CCM2-211ENST00000478582 SERPINA7P05543 415 aa25.05■■□□□ 1.6
CCM2-211ENST00000478582 DRD2P14416 443 aa25.05■■□□□ 1.6
CCM2-211ENST00000478582 TAS2R50P59544 299 aa25.05■■□□□ 1.6
CCM2-211ENST00000478582 AP2B1P63010 937 aa25.05■■□□□ 1.6
CCM2-211ENST00000478582 FOLH1Q04609 750 aa25.05■■□□□ 1.6
CCM2-211ENST00000478582 ZNF763Q0D2J5 394 aa25.05■■□□□ 1.6
CCM2-211ENST00000478582 EXT1Q16394 746 aa25.05■■□□□ 1.6
CCM2-211ENST00000478582 PARP9Q8IXQ6 854 aa25.05■■□□□ 1.6
CCM2-211ENST00000478582 KBTBD2Q8IY47 623 aa25.05■■□□□ 1.6
CCM2-211ENST00000478582 UCN3Q969E3 161 aa25.05■■□□□ 1.6
CCM2-211ENST00000478582 EBPLQ9BY08 206 aa25.05■■□□□ 1.6
CCM2-211ENST00000478582 DLGAP4Q9Y2H0 992 aa25.05■■□□□ 1.6
CCM2-211ENST00000478582 POLR3HQ9Y535 204 aaPredicted RBP25.05■■□□□ 1.6
CCM2-211ENST00000478582 SCN2AQ99250 2005 aa25.05■■□□□ 1.6
CCM2-211ENST00000478582 SAGE2PA6NJ88 616 aa25.04■■□□□ 1.6
CCM2-211ENST00000478582 WASHC1A8K0Z3 465 aa25.04■■□□□ 1.6
CCM2-211ENST00000478582 PDGFAP04085 211 aa25.04■■□□□ 1.6
CCM2-211ENST00000478582 JUNP05412 331 aaKnown RBP25.04■■□□□ 1.6
CCM2-211ENST00000478582 PRR35P0CG20 571 aa25.04■■□□□ 1.6
CCM2-211ENST00000478582 CASRP41180 1078 aa25.04■■□□□ 1.6
CCM2-211ENST00000478582 ELAVL1Q15717 326 aaKnown RBP25.04■■□□□ 1.6
CCM2-211ENST00000478582 PDCD2Q16342 344 aaPredicted RBP25.04■■□□□ 1.6
CCM2-211ENST00000478582 SLC48A1Q6P1K1 146 aa25.04■■□□□ 1.6
CCM2-211ENST00000478582 OR4N5Q8IXE1 308 aa25.04■■□□□ 1.6
CCM2-211ENST00000478582 NFAM1Q8NET5 270 aaPredicted RBP25.04■■□□□ 1.6
CCM2-211ENST00000478582 M1APQ8TC57 530 aa25.04■■□□□ 1.6
CCM2-211ENST00000478582 LRRC8CQ8TDW0 803 aa25.04■■□□□ 1.6
CCM2-211ENST00000478582 DYDC1Q8WWB3 177 aa25.04■■□□□ 1.6
CCM2-211ENST00000478582 CKAP2Q8WWK9 683 aa25.04■■□□□ 1.6
CCM2-211ENST00000478582 MYNNQ9NPC7 610 aa25.04■■□□□ 1.6
CCM2-211ENST00000478582 PNO1Q9NRX1 252 aaKnown RBP25.04■■□□□ 1.6
CCM2-211ENST00000478582 PPIEQ9UNP9 301 aaKnown RBP25.04■■□□□ 1.6
CCM2-211ENST00000478582 SLCO1B7G3V0H7 640 aa25.03■■□□□ 1.6
CCM2-211ENST00000478582 PYCARD-AS1I3L0S3 204 aa25.03■■□□□ 1.6
CCM2-211ENST00000478582 KLHL41O60662 606 aa25.03■■□□□ 1.6
CCM2-211ENST00000478582 IL3P08700 152 aa25.03■■□□□ 1.6
CCM2-211ENST00000478582 STT3AP46977 705 aa25.03■■□□□ 1.6
CCM2-211ENST00000478582 SLC26A5P58743 744 aa25.03■■□□□ 1.6
CCM2-211ENST00000478582 MYBPC3Q14896 1274 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms