RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 MBD3L4A6NDZ8 208 aaPredicted RBP18.58■□□□□ 0.56
PDLIM1-202ENST00000477757 MBD3L3A6NE82 208 aaPredicted RBP18.58■□□□□ 0.56
PDLIM1-202ENST00000477757 MBD3L5A6NJ08 208 aaPredicted RBP18.58■□□□□ 0.56
PDLIM1-202ENST00000477757 CD8B2A6NJW9 211 aa18.58■□□□□ 0.56
PDLIM1-202ENST00000477757 ETHE1O95571 254 aa18.58■□□□□ 0.56
PDLIM1-202ENST00000477757 TNNI3P19429 210 aa18.58■□□□□ 0.56
PDLIM1-202ENST00000477757 GDF1P27539 372 aa18.58■□□□□ 0.56
PDLIM1-202ENST00000477757 GSTM2P28161 218 aa18.58■□□□□ 0.56
PDLIM1-202ENST00000477757 MAGEA3P43357 314 aa18.58■□□□□ 0.56
PDLIM1-202ENST00000477757 VPS41P49754 854 aa18.58■□□□□ 0.56
PDLIM1-202ENST00000477757 PLA2G16P53816 162 aa18.58■□□□□ 0.56
PDLIM1-202ENST00000477757 TRIP13Q15645 432 aaPredicted RBP18.58■□□□□ 0.56
PDLIM1-202ENST00000477757 C9orf40Q8IXQ3 194 aa18.58■□□□□ 0.56
PDLIM1-202ENST00000477757 DND1Q8IYX4 353 aaKnown RBP18.58■□□□□ 0.56
PDLIM1-202ENST00000477757 AGGF1Q8N302 714 aaeCLIP18.58■□□□□ 0.56
PDLIM1-202ENST00000477757 OR2L5Q8NG80 312 aa18.58■□□□□ 0.56
PDLIM1-202ENST00000477757 MBD3L2Q8NHZ7 208 aaPredicted RBP18.58■□□□□ 0.56
PDLIM1-202ENST00000477757 PIGTQ969N2 578 aa18.58■□□□□ 0.56
PDLIM1-202ENST00000477757 ISL2Q96A47 359 aa18.58■□□□□ 0.56
PDLIM1-202ENST00000477757 DESI2Q9BSY9 194 aa18.58■□□□□ 0.56
PDLIM1-202ENST00000477757 EPB41L4BQ9H329 900 aa18.58■□□□□ 0.56
PDLIM1-202ENST00000477757 TRPS1Q9UHF7 1281 aa18.58■□□□□ 0.56
PDLIM1-202ENST00000477757 SLC22A14Q9Y267 594 aa18.58■□□□□ 0.56
PDLIM1-202ENST00000477757 CES2O00748 559 aa18.57■□□□□ 0.56
PDLIM1-202ENST00000477757 GABRB3P28472 473 aa18.57■□□□□ 0.56
PDLIM1-202ENST00000477757 HPDP32754 393 aaPredicted RBP18.57■□□□□ 0.56
PDLIM1-202ENST00000477757 AGFG1P52594 562 aaKnown RBP18.57■□□□□ 0.56
PDLIM1-202ENST00000477757 MTTPP55157 894 aa18.57■□□□□ 0.56
PDLIM1-202ENST00000477757 GPS1Q13098 491 aa18.57■□□□□ 0.56
PDLIM1-202ENST00000477757 PPP1R3AQ16821 1122 aa18.57■□□□□ 0.56
PDLIM1-202ENST00000477757 TRIM40Q6P9F5 258 aa18.57■□□□□ 0.56
PDLIM1-202ENST00000477757 TMIGD1Q6UXZ0 262 aa18.57■□□□□ 0.56
PDLIM1-202ENST00000477757 YTHDF3Q7Z739 585 aaKnown RBP18.57■□□□□ 0.56
PDLIM1-202ENST00000477757 RNF10Q8N5U6 811 aaKnown RBP18.57■□□□□ 0.56
PDLIM1-202ENST00000477757 SLC15A4Q8N697 577 aa18.57■□□□□ 0.56
PDLIM1-202ENST00000477757 MCUQ8NE86 351 aa18.57■□□□□ 0.56
PDLIM1-202ENST00000477757 OR10G3Q8NGC4 313 aa18.57■□□□□ 0.56
PDLIM1-202ENST00000477757 CCT6BQ92526 530 aa18.57■□□□□ 0.56
PDLIM1-202ENST00000477757 NTNG2Q96CW9 530 aa18.57■□□□□ 0.56
PDLIM1-202ENST00000477757 ZNF597Q96LX8 424 aa18.57■□□□□ 0.56
PDLIM1-202ENST00000477757 JSRP1Q96MG2 331 aaPredicted RBP18.57■□□□□ 0.56
PDLIM1-202ENST00000477757 REXO4Q9GZR2 422 aaKnown RBP18.57■□□□□ 0.56
PDLIM1-202ENST00000477757 HOMER3Q9NSC5 361 aa18.57■□□□□ 0.56
PDLIM1-202ENST00000477757 CNOT11Q9UKZ1 510 aaKnown RBP18.57■□□□□ 0.56
PDLIM1-202ENST00000477757 TRIM64A6NGJ6 449 aa18.56■□□□□ 0.56
PDLIM1-202ENST00000477757 TRIM64BA6NI03 449 aa18.56■□□□□ 0.56
PDLIM1-202ENST00000477757 CLEC3AO75596 197 aa18.56■□□□□ 0.56
PDLIM1-202ENST00000477757 TBX6O95947 436 aaPredicted RBP18.56■□□□□ 0.56
PDLIM1-202ENST00000477757 C1QAP02745 245 aa18.56■□□□□ 0.56
PDLIM1-202ENST00000477757 IGKV3-11P04433 115 aa18.56■□□□□ 0.56
PDLIM1-202ENST00000477757 PDAP1Q13442 181 aaKnown RBP18.56■□□□□ 0.56
PDLIM1-202ENST00000477757 ABHD17CQ6PCB6 329 aa18.56■□□□□ 0.56
PDLIM1-202ENST00000477757 SLCO4C1Q6ZQN7 724 aa18.56■□□□□ 0.56
PDLIM1-202ENST00000477757 FAM13CQ8NE31 585 aa18.56■□□□□ 0.56
PDLIM1-202ENST00000477757 TRIB1Q96RU8 372 aa18.56■□□□□ 0.56
PDLIM1-202ENST00000477757 DOHHQ9BU89 302 aa18.56■□□□□ 0.56
PDLIM1-202ENST00000477757 RBM24Q9BX46 236 aaKnown RBP18.56■□□□□ 0.56
PDLIM1-202ENST00000477757 COPS7BQ9H9Q2 264 aaPredicted RBP18.56■□□□□ 0.56
PDLIM1-202ENST00000477757 GALNT8Q9NY28 637 aa18.56■□□□□ 0.56
PDLIM1-202ENST00000477757 EIF3LQ9Y262 564 aaKnown RBP18.56■□□□□ 0.56
PDLIM1-202ENST00000477757 DOCK7Q96N67 2140 aa18.55■□□□□ 0.56
PDLIM1-202ENST00000477757 GOLGA8MH3BSY2 632 aa18.55■□□□□ 0.56
PDLIM1-202ENST00000477757 LDB3O75112 727 aa18.55■□□□□ 0.56
PDLIM1-202ENST00000477757 TRIM3O75382 744 aaPredicted RBP18.55■□□□□ 0.56
PDLIM1-202ENST00000477757 ERN1O75460 977 aaKnown RBP18.55■□□□□ 0.56
PDLIM1-202ENST00000477757 CCDC175P0C221 793 aa18.55■□□□□ 0.56
PDLIM1-202ENST00000477757 FBXO45P0C2W1 286 aa18.55■□□□□ 0.56
PDLIM1-202ENST00000477757 C1GALT1C1LP0DN25 315 aa18.55■□□□□ 0.56
PDLIM1-202ENST00000477757 GNAZP19086 355 aa18.55■□□□□ 0.56
PDLIM1-202ENST00000477757 SLBPQ14493 270 aaKnown RBP eCLIP18.55■□□□□ 0.56
PDLIM1-202ENST00000477757 VASNQ6EMK4 673 aa18.55■□□□□ 0.56
PDLIM1-202ENST00000477757 GABPB2Q8TAK5 448 aaPredicted RBP18.55■□□□□ 0.56
PDLIM1-202ENST00000477757 MAIP1Q8WWC4 291 aa18.55■□□□□ 0.56
PDLIM1-202ENST00000477757 LYRM4Q9HD34 91 aa18.55■□□□□ 0.56
PDLIM1-202ENST00000477757 RYDENQ9NUL5 291 aaKnown RBP18.55■□□□□ 0.56
PDLIM1-202ENST00000477757 IKZF3Q9UKT9 509 aa18.55■□□□□ 0.56
PDLIM1-202ENST00000477757 CAMK2AQ9UQM7 478 aa18.55■□□□□ 0.56
PDLIM1-202ENST00000477757 ANK3Q12955 4377 aaKnown RBP18.54■□□□□ 0.56
PDLIM1-202ENST00000477757 LRATO95237 230 aa18.54■□□□□ 0.56
PDLIM1-202ENST00000477757 FGGP02679 453 aa18.54■□□□□ 0.56
PDLIM1-202ENST00000477757 HPNP05981 417 aa18.54■□□□□ 0.56
PDLIM1-202ENST00000477757 COX7A2P14406 83 aa18.54■□□□□ 0.56
PDLIM1-202ENST00000477757 BMP7P18075 431 aa18.54■□□□□ 0.56
PDLIM1-202ENST00000477757 PGGT1BP53609 377 aa18.54■□□□□ 0.56
PDLIM1-202ENST00000477757 NHSL2Q5HYW2 709 aa18.54■□□□□ 0.56
PDLIM1-202ENST00000477757 SYDE1Q6ZW31 735 aaPredicted RBP18.54■□□□□ 0.56
PDLIM1-202ENST00000477757 VN1R5Q7Z5H4 357 aa18.54■□□□□ 0.56
PDLIM1-202ENST00000477757 TMEM139Q8IV31 216 aa18.54■□□□□ 0.56
PDLIM1-202ENST00000477757 SENP5Q96HI0 755 aaPredicted RBP18.54■□□□□ 0.56
PDLIM1-202ENST00000477757 UBQLN3Q9H347 655 aa18.54■□□□□ 0.56
PDLIM1-202ENST00000477757 CALHM2Q9HA72 323 aa18.54■□□□□ 0.56
PDLIM1-202ENST00000477757 TESMINQ9Y4I5 508 aa18.54■□□□□ 0.56
PDLIM1-202ENST00000477757 IKBKGQ9Y6K9 419 aa18.54■□□□□ 0.56
PDLIM1-202ENST00000477757 H2AFYO75367 372 aaKnown RBP18.53■□□□□ 0.56
PDLIM1-202ENST00000477757 TMIGD3P0DMS9 266 aaPredicted RBP18.53■□□□□ 0.56
PDLIM1-202ENST00000477757 SERPINB3P29508 390 aa18.53■□□□□ 0.56
PDLIM1-202ENST00000477757 CDK9P50750 372 aaKnown RBP18.53■□□□□ 0.56
PDLIM1-202ENST00000477757 IGLV3-21P80748 117 aaPredicted RBP18.53■□□□□ 0.56
PDLIM1-202ENST00000477757 ID2Q02363 134 aa18.53■□□□□ 0.56
PDLIM1-202ENST00000477757 CRYMQ14894 314 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms