RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 LRRC26Q2I0M4 334 aa9.31□□□□□ -0.92
CMC1-209ENST00000477739 PLET1Q6UQ28 207 aa9.31□□□□□ -0.92
CMC1-209ENST00000477739 FAM9CQ8IZT9 166 aa9.31□□□□□ -0.92
CMC1-209ENST00000477739 DNAJC22Q8N4W6 341 aa9.31□□□□□ -0.92
CMC1-209ENST00000477739 BEST4Q8NFU0 473 aa9.31□□□□□ -0.92
CMC1-209ENST00000477739 ZCCHC10Q8TBK6 192 aa9.31□□□□□ -0.92
CMC1-209ENST00000477739 ADAMTS19Q8TE59 1207 aa9.31□□□□□ -0.92
CMC1-209ENST00000477739 ZFPM2Q8WW38 1151 aa9.31□□□□□ -0.92
CMC1-209ENST00000477739 ZNF486Q96H40 463 aaPredicted RBP9.31□□□□□ -0.92
CMC1-209ENST00000477739 CDADC1Q9BWV3 514 aa9.31□□□□□ -0.92
CMC1-209ENST00000477739 SLC6A16Q9GZN6 736 aa9.31□□□□□ -0.92
CMC1-209ENST00000477739 EGLN3Q9H6Z9 239 aa9.31□□□□□ -0.92
CMC1-209ENST00000477739 SP140LQ9H930 580 aa9.31□□□□□ -0.92
CMC1-209ENST00000477739 IL21Q9HBE4 155 aa9.31□□□□□ -0.92
CMC1-209ENST00000477739 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.31□□□□□ -0.92
CMC1-209ENST00000477739 KCNK6Q9Y257 313 aa9.31□□□□□ -0.92
CMC1-209ENST00000477739 HSPB11Q9Y547 144 aa9.31□□□□□ -0.92
CMC1-209ENST00000477739 ZC3H12DA2A288 527 aaKnown RBP9.31□□□□□ -0.92
CMC1-209ENST00000477739 PSMD9O00233 223 aa9.31□□□□□ -0.92
CMC1-209ENST00000477739 SCAMP2O15127 329 aaKnown RBP9.31□□□□□ -0.92
CMC1-209ENST00000477739 HRO43593 1189 aa9.31□□□□□ -0.92
CMC1-209ENST00000477739 ATG13O75143 517 aa9.31□□□□□ -0.92
CMC1-209ENST00000477739 CYP17A1P05093 508 aa9.31□□□□□ -0.92
CMC1-209ENST00000477739 C8GP07360 202 aa9.31□□□□□ -0.92
CMC1-209ENST00000477739 APEX1P27695 318 aaKnown RBP9.31□□□□□ -0.92
CMC1-209ENST00000477739 GPR4P46093 362 aa9.31□□□□□ -0.92
CMC1-209ENST00000477739 ODF4Q2M2E3 257 aa9.31□□□□□ -0.92
CMC1-209ENST00000477739 LRIT3Q3SXY7 679 aa9.31□□□□□ -0.92
CMC1-209ENST00000477739 ARHGAP15Q53QZ3 475 aa9.31□□□□□ -0.92
CMC1-209ENST00000477739 IDNKQ5T6J7 187 aa9.31□□□□□ -0.92
CMC1-209ENST00000477739 CAPN13Q6MZZ7 669 aaPredicted RBP9.31□□□□□ -0.92
CMC1-209ENST00000477739 SLC39A5Q6ZMH5 540 aa9.31□□□□□ -0.92
CMC1-209ENST00000477739 LRRTM4Q86VH4 590 aa9.31□□□□□ -0.92
CMC1-209ENST00000477739 RASGEF1AQ8N9B8 481 aa9.31□□□□□ -0.92
CMC1-209ENST00000477739 ATP6V1C2Q8NEY4 427 aa9.31□□□□□ -0.92
CMC1-209ENST00000477739 APH1BQ8WW43 257 aa9.31□□□□□ -0.92
CMC1-209ENST00000477739 CLIP3Q96DZ5 547 aa9.31□□□□□ -0.92
CMC1-209ENST00000477739 CHIAQ9BZP6 476 aa9.31□□□□□ -0.92
CMC1-209ENST00000477739 CUEDC1Q9NWM3 386 aaPredicted RBP9.31□□□□□ -0.92
CMC1-209ENST00000477739 PTGFRNQ9P2B2 879 aa9.31□□□□□ -0.92
CMC1-209ENST00000477739 CLCA2Q9UQC9 943 aa9.31□□□□□ -0.92
CMC1-209ENST00000477739 CCL27Q9Y4X3 112 aa9.31□□□□□ -0.92
CMC1-209ENST00000477739 LOC102723532A0A0G2JNH3 316 aa9.3□□□□□ -0.92
CMC1-209ENST00000477739 NOTOA8MTQ0 251 aa9.3□□□□□ -0.92
CMC1-209ENST00000477739 GPX5O75715 221 aa9.3□□□□□ -0.92
CMC1-209ENST00000477739 POP7O75817 140 aaKnown RBP9.3□□□□□ -0.92
CMC1-209ENST00000477739 SOX30O94993 753 aa9.3□□□□□ -0.92
CMC1-209ENST00000477739 CCL5P13501 91 aa9.3□□□□□ -0.92
CMC1-209ENST00000477739 JUPP14923 745 aa9.3□□□□□ -0.92
CMC1-209ENST00000477739 TGM1P22735 817 aa9.3□□□□□ -0.92
CMC1-209ENST00000477739 PPM1AP35813 382 aa9.3□□□□□ -0.92
CMC1-209ENST00000477739 DSTNP60981 165 aa9.3□□□□□ -0.92
CMC1-209ENST00000477739 MRPL28Q13084 256 aaKnown RBP9.3□□□□□ -0.92
CMC1-209ENST00000477739 GINS1Q14691 196 aa9.3□□□□□ -0.92
CMC1-209ENST00000477739 C9orf64Q5T6V5 341 aa9.3□□□□□ -0.92
CMC1-209ENST00000477739 SLC30A6Q6NXT4 461 aa9.3□□□□□ -0.92
CMC1-209ENST00000477739 ARMCX6Q7L4S7 300 aa9.3□□□□□ -0.92
CMC1-209ENST00000477739 VASH1Q7L8A9 365 aaPredicted RBP9.3□□□□□ -0.92
CMC1-209ENST00000477739 ALDH16A1Q8IZ83 802 aa9.3□□□□□ -0.92
CMC1-209ENST00000477739 ZNF557Q8N988 423 aaPredicted RBP9.3□□□□□ -0.92
CMC1-209ENST00000477739 RAD51AP1Q96B01 352 aa9.3□□□□□ -0.92
CMC1-209ENST00000477739 TMEM19Q96HH6 336 aa9.3□□□□□ -0.92
CMC1-209ENST00000477739 OR4K3Q96R72 315 aa9.3□□□□□ -0.92
CMC1-209ENST00000477739 WFDC6Q9BQY6 131 aa9.3□□□□□ -0.92
CMC1-209ENST00000477739 NECTIN3Q9NQS3 549 aa9.3□□□□□ -0.92
CMC1-209ENST00000477739 H2AFY2Q9P0M6 372 aaPredicted RBP9.3□□□□□ -0.92
CMC1-209ENST00000477739 ISM1B1AKI9 464 aa9.3□□□□□ -0.92
CMC1-209ENST00000477739 DSCR3O14972 297 aa9.3□□□□□ -0.92
CMC1-209ENST00000477739 C7P10643 843 aa9.3□□□□□ -0.92
CMC1-209ENST00000477739 CPN2P22792 545 aa9.3□□□□□ -0.92
CMC1-209ENST00000477739 SPHARQ15513 63 aa9.3□□□□□ -0.92
CMC1-209ENST00000477739 THOC7Q6I9Y2 204 aaKnown RBP9.3□□□□□ -0.92
CMC1-209ENST00000477739 TMEFF1Q8IYR6 380 aa9.3□□□□□ -0.92
CMC1-209ENST00000477739 TP53I13Q8NBR0 393 aaPredicted RBP9.3□□□□□ -0.92
CMC1-209ENST00000477739 ASB11Q8WXH4 323 aa9.3□□□□□ -0.92
CMC1-209ENST00000477739 SLC35B4Q969S0 331 aa9.3□□□□□ -0.92
CMC1-209ENST00000477739 DOK1Q99704 481 aa9.3□□□□□ -0.92
CMC1-209ENST00000477739 NTMT1Q9BV86 223 aa9.3□□□□□ -0.92
CMC1-209ENST00000477739 SLC29A3Q9BZD2 475 aa9.3□□□□□ -0.92
CMC1-209ENST00000477739 SMURF1Q9HCE7 757 aa9.3□□□□□ -0.92
CMC1-209ENST00000477739 SPATA7Q9P0W8 599 aa9.3□□□□□ -0.92
CMC1-209ENST00000477739 SPATA2Q9UM82 520 aa9.3□□□□□ -0.92
CMC1-209ENST00000477739 NPIPA5A0A0B4J1W7 369 aa9.3□□□□□ -0.92
CMC1-209ENST00000477739 TBC1D3BA6NDS4 549 aa9.3□□□□□ -0.92
CMC1-209ENST00000477739 NPIPA7E9PJI5 369 aa9.3□□□□□ -0.92
CMC1-209ENST00000477739 KMOO15229 486 aa9.3□□□□□ -0.92
CMC1-209ENST00000477739 MAGEB4O15481 346 aaPredicted RBP9.3□□□□□ -0.92
CMC1-209ENST00000477739 GNRH1P01148 92 aa9.3□□□□□ -0.92
CMC1-209ENST00000477739 NPIPA8P0DM63 369 aa9.3□□□□□ -0.92
CMC1-209ENST00000477739 CBSLP0DN79 551 aa9.3□□□□□ -0.92
CMC1-209ENST00000477739 ACP5P13686 325 aa9.3□□□□□ -0.92
CMC1-209ENST00000477739 CBSP35520 551 aa9.3□□□□□ -0.92
CMC1-209ENST00000477739 TAS2R41P59536 307 aa9.3□□□□□ -0.92
CMC1-209ENST00000477739 PCDH1Q08174 1060 aa9.3□□□□□ -0.92
CMC1-209ENST00000477739 ATAD3CQ5T2N8 411 aa9.3□□□□□ -0.92
CMC1-209ENST00000477739 ZC3H14Q6PJT7 736 aaKnown RBP9.3□□□□□ -0.92
CMC1-209ENST00000477739 HTR3DQ70Z44 454 aa9.3□□□□□ -0.92
CMC1-209ENST00000477739 CBLL1Q75N03 491 aa9.3□□□□□ -0.92
CMC1-209ENST00000477739 LRRC70Q7Z2Q7 622 aa9.3□□□□□ -0.92
CMC1-209ENST00000477739 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms