RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 S100PBPQ96BU1 408 aa17.84■□□□□ 0.45
VARS2-209ENST00000477288 CCDC163A0A0D9SF12 145 aa17.84■□□□□ 0.45
VARS2-209ENST00000477288 OTX2P32243 289 aa17.84■□□□□ 0.45
VARS2-209ENST00000477288 UBE2UQ5VVX9 321 aa17.84■□□□□ 0.45
VARS2-209ENST00000477288 THAP4Q8WY91 577 aa17.84■□□□□ 0.45
VARS2-209ENST00000477288 PGAM5Q96HS1 289 aa17.84■□□□□ 0.45
VARS2-209ENST00000477288 OR2B3O76000 313 aa17.83■□□□□ 0.45
VARS2-209ENST00000477288 CAV3P56539 151 aa17.83■□□□□ 0.45
VARS2-209ENST00000477288 RPS15P62841 145 aaKnown RBP17.83■□□□□ 0.45
VARS2-209ENST00000477288 KIAA1614Q5VZ46 1190 aa17.83■□□□□ 0.45
VARS2-209ENST00000477288 TUBA3EQ6PEY2 450 aa17.83■□□□□ 0.45
VARS2-209ENST00000477288 NKX2-4Q9H2Z4 354 aa17.83■□□□□ 0.45
VARS2-209ENST00000477288 CLEC4EQ9ULY5 219 aa17.83■□□□□ 0.45
VARS2-209ENST00000477288 FBP2O00757 339 aa17.83■□□□□ 0.45
VARS2-209ENST00000477288 PMM2O15305 246 aa17.83■□□□□ 0.45
VARS2-209ENST00000477288 RAB28P51157 221 aa17.83■□□□□ 0.45
VARS2-209ENST00000477288 EMX2Q04743 252 aa17.83■□□□□ 0.45
VARS2-209ENST00000477288 CCDC58Q4VC31 144 aa17.83■□□□□ 0.45
VARS2-209ENST00000477288 PACRGLQ8N7B6 248 aa17.83■□□□□ 0.45
VARS2-209ENST00000477288 OR13C3Q8NGS6 347 aa17.83■□□□□ 0.45
VARS2-209ENST00000477288 SNIP1Q8TAD8 396 aaKnown RBP17.83■□□□□ 0.45
VARS2-209ENST00000477288 RAB7BQ96AH8 199 aa17.83■□□□□ 0.45
VARS2-209ENST00000477288 HCN4Q9Y3Q4 1203 aa17.83■□□□□ 0.45
VARS2-209ENST00000477288 SLIT2O94813 1529 aa17.83■□□□□ 0.44
VARS2-209ENST00000477288 MAN2B1O00754 1011 aa17.83■□□□□ 0.44
VARS2-209ENST00000477288 ABHD18Q0P651 414 aa17.83■□□□□ 0.44
VARS2-209ENST00000477288 SLAMF1Q13291 335 aa17.83■□□□□ 0.44
VARS2-209ENST00000477288 TMEM151BQ8IW70 566 aa17.83■□□□□ 0.44
VARS2-209ENST00000477288 SAMD12Q8N8I0 201 aa17.83■□□□□ 0.44
VARS2-209ENST00000477288 CPT1CQ8TCG5 803 aa17.83■□□□□ 0.44
VARS2-209ENST00000477288 RNF186Q9NXI6 227 aa17.83■□□□□ 0.44
VARS2-209ENST00000477288 ICKQ9UPZ9 632 aa17.83■□□□□ 0.44
VARS2-209ENST00000477288 MGAT4BQ9UQ53 548 aa17.83■□□□□ 0.44
VARS2-209ENST00000477288 BTBD16Q32M84 506 aa17.83■□□□□ 0.44
VARS2-209ENST00000477288 DEFB134Q4QY38 66 aa17.83■□□□□ 0.44
VARS2-209ENST00000477288 GALNT10Q86SR1 603 aa17.83■□□□□ 0.44
VARS2-209ENST00000477288 NUP43Q8NFH3 380 aa17.83■□□□□ 0.44
VARS2-209ENST00000477288 OR6Q1Q8NGQ2 317 aa17.83■□□□□ 0.44
VARS2-209ENST00000477288 GLYATL1Q969I3 302 aa17.83■□□□□ 0.44
VARS2-209ENST00000477288 MRM3Q9HC36 420 aaKnown RBP17.83■□□□□ 0.44
VARS2-209ENST00000477288 SOCS5O75159 536 aa17.82■□□□□ 0.44
VARS2-209ENST00000477288 IFNA5P01569 189 aa17.82■□□□□ 0.44
VARS2-209ENST00000477288 IFNGR1P15260 489 aa17.82■□□□□ 0.44
VARS2-209ENST00000477288 GGT2P36268 569 aa17.82■□□□□ 0.44
VARS2-209ENST00000477288 GINS1Q14691 196 aa17.82■□□□□ 0.44
VARS2-209ENST00000477288 DCAF12L1Q5VU92 463 aa17.82■□□□□ 0.44
VARS2-209ENST00000477288 TRAM1L1Q8N609 369 aa17.82■□□□□ 0.44
VARS2-209ENST00000477288 C2CD4AQ8NCU7 369 aaPredicted RBP17.82■□□□□ 0.44
VARS2-209ENST00000477288 HINT2Q9BX68 163 aa17.82■□□□□ 0.44
VARS2-209ENST00000477288 BORCS7-ASMTA0A0B4J1R7 106 aa17.82■□□□□ 0.44
VARS2-209ENST00000477288 IGLON5A6NGN9 336 aa17.82■□□□□ 0.44
VARS2-209ENST00000477288 ZNF850A8MQ14 1090 aa17.82■□□□□ 0.44
VARS2-209ENST00000477288 SEC14L5O43304 696 aa17.82■□□□□ 0.44
VARS2-209ENST00000477288 WDR4P57081 412 aaKnown RBP17.82■□□□□ 0.44
VARS2-209ENST00000477288 KBTBD6Q86V97 674 aa17.82■□□□□ 0.44
VARS2-209ENST00000477288 OR5T1Q8NG75 326 aa17.82■□□□□ 0.44
VARS2-209ENST00000477288 BBS10Q8TAM1 723 aa17.82■□□□□ 0.44
VARS2-209ENST00000477288 RPF2Q9H7B2 306 aaKnown RBP17.82■□□□□ 0.44
VARS2-209ENST00000477288 TMEM184CQ9NVA4 438 aa17.82■□□□□ 0.44
VARS2-209ENST00000477288 EXTL2Q9UBQ6 330 aa17.82■□□□□ 0.44
VARS2-209ENST00000477288 SUSD2Q9UGT4 822 aa17.82■□□□□ 0.44
VARS2-209ENST00000477288 SOCS2O14508 198 aa17.82■□□□□ 0.44
VARS2-209ENST00000477288 PET100P0DJ07 73 aa17.82■□□□□ 0.44
VARS2-209ENST00000477288 SRYQ05066 204 aa17.82■□□□□ 0.44
VARS2-209ENST00000477288 LRIT3Q3SXY7 679 aa17.82■□□□□ 0.44
VARS2-209ENST00000477288 CDNFQ49AH0 187 aa17.82■□□□□ 0.44
VARS2-209ENST00000477288 ZNF678Q5SXM1 525 aa17.82■□□□□ 0.44
VARS2-209ENST00000477288 SARDHQ9UL12 918 aa17.82■□□□□ 0.44
VARS2-209ENST00000477288 PEX14O75381 377 aa17.82■□□□□ 0.44
VARS2-209ENST00000477288 RP2O75695 350 aa17.82■□□□□ 0.44
VARS2-209ENST00000477288 CKMT1AP12532 417 aa17.82■□□□□ 0.44
VARS2-209ENST00000477288 HSD11B2P80365 405 aa17.82■□□□□ 0.44
VARS2-209ENST00000477288 TUBA3CQ13748 450 aa17.82■□□□□ 0.44
VARS2-209ENST00000477288 TMEM236Q5W0B7 351 aa17.82■□□□□ 0.44
VARS2-209ENST00000477288 DPY19L3Q6ZPD9 716 aa17.82■□□□□ 0.44
VARS2-209ENST00000477288 GALNT12Q8IXK2 581 aa17.82■□□□□ 0.44
VARS2-209ENST00000477288 DAZLQ92904 295 aaKnown RBP17.82■□□□□ 0.44
VARS2-209ENST00000477288 ACTR3BQ9P1U1 418 aa17.82■□□□□ 0.44
VARS2-209ENST00000477288 AFDNP55196 1824 aaKnown RBP17.82■□□□□ 0.44
VARS2-209ENST00000477288 A0A1W2PP18 115 aa17.82■□□□□ 0.44
VARS2-209ENST00000477288 MAFKO60675 156 aa17.82■□□□□ 0.44
VARS2-209ENST00000477288 TUBA1BP68363 451 aa17.82■□□□□ 0.44
VARS2-209ENST00000477288 TUBA4AP68366 448 aa17.82■□□□□ 0.44
VARS2-209ENST00000477288 ATAD3CQ5T2N8 411 aa17.82■□□□□ 0.44
VARS2-209ENST00000477288 TUBA1AQ71U36 451 aa17.82■□□□□ 0.44
VARS2-209ENST00000477288 YTHDF1Q9BYJ9 559 aaKnown RBP17.82■□□□□ 0.44
VARS2-209ENST00000477288 SRA1Q9HD15 236 aaKnown RBP17.82■□□□□ 0.44
VARS2-209ENST00000477288 HSPB11Q9Y547 144 aa17.82■□□□□ 0.44
VARS2-209ENST00000477288 FEZF1A0PJY2 475 aa17.81■□□□□ 0.44
VARS2-209ENST00000477288 UNC119BA6NIH7 251 aa17.81■□□□□ 0.44
VARS2-209ENST00000477288 SNAI1O95863 264 aaPredicted RBP17.81■□□□□ 0.44
VARS2-209ENST00000477288 RPS3P23396 243 aaKnown RBP eCLIP17.81■□□□□ 0.442e-8■■□□□ 13.5
VARS2-209ENST00000477288 KCNC1P48547 511 aa17.81■□□□□ 0.44
VARS2-209ENST00000477288 UPP1Q16831 310 aa17.81■□□□□ 0.44
VARS2-209ENST00000477288 HAGHLQ6PII5 290 aaPredicted RBP17.81■□□□□ 0.44
VARS2-209ENST00000477288 LRFN4Q6PJG9 635 aa17.81■□□□□ 0.44
VARS2-209ENST00000477288 CSNK1A1LQ8N752 337 aa17.81■□□□□ 0.44
VARS2-209ENST00000477288 TXNDC5Q8NBS9 432 aaKnown RBP17.81■□□□□ 0.44
VARS2-209ENST00000477288 NPY6RQ99463 290 aa17.81■□□□□ 0.44
VARS2-209ENST00000477288 TPSD1Q9BZJ3 242 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms