RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 GAL3ST3Q96A11 431 aa10.88□□□□□ -0.67
LSM2-212ENST00000477182 RGMAQ96B86 450 aa10.88□□□□□ -0.67
LSM2-212ENST00000477182 APIPQ96GX9 242 aa10.88□□□□□ -0.67
LSM2-212ENST00000477182 C10orf90Q96M02 699 aa10.88□□□□□ -0.67
LSM2-212ENST00000477182 OR52B2Q96RD2 323 aa10.88□□□□□ -0.67
LSM2-212ENST00000477182 CCT8L2Q96SF2 557 aa10.88□□□□□ -0.67
LSM2-212ENST00000477182 WDR77Q9BQA1 342 aaPredicted RBP10.88□□□□□ -0.67
LSM2-212ENST00000477182 C17orf62Q9BQA9 187 aa10.88□□□□□ -0.67
LSM2-212ENST00000477182 SIKE1Q9BRV8 207 aa10.88□□□□□ -0.67
LSM2-212ENST00000477182 CENPKQ9BS16 269 aa10.88□□□□□ -0.67
LSM2-212ENST00000477182 SORBS1Q9BX66 1292 aaKnown RBP10.88□□□□□ -0.67
LSM2-212ENST00000477182 LRTM1Q9HBL6 345 aa10.88□□□□□ -0.67
LSM2-212ENST00000477182 NMRK1Q9NWW6 199 aa10.88□□□□□ -0.67
LSM2-212ENST00000477182 C1orf109Q9NX04 203 aa10.88□□□□□ -0.67
LSM2-212ENST00000477182 CCDC88CQ9P219 2028 aa10.88□□□□□ -0.67
LSM2-212ENST00000477182 KLHL14Q9P2G3 628 aa10.88□□□□□ -0.67
LSM2-212ENST00000477182 PADI2Q9Y2J8 665 aa10.88□□□□□ -0.67
LSM2-212ENST00000477182 HYKKA2RU49 373 aa10.87□□□□□ -0.67
LSM2-212ENST00000477182 FITM1A5D6W6 292 aa10.87□□□□□ -0.67
LSM2-212ENST00000477182 URADA6NGE7 173 aa10.87□□□□□ -0.67
LSM2-212ENST00000477182 NPIPB8E9PQR5 432 aa10.87□□□□□ -0.67
LSM2-212ENST00000477182 ZNF749O43361 778 aa10.87□□□□□ -0.67
LSM2-212ENST00000477182 SNX3O60493 162 aa10.87□□□□□ -0.67
LSM2-212ENST00000477182 SEMA3DO95025 777 aa10.87□□□□□ -0.67
LSM2-212ENST00000477182 PRPH2P23942 346 aa10.87□□□□□ -0.67
LSM2-212ENST00000477182 ARFIP2P53365 341 aa10.87□□□□□ -0.67
LSM2-212ENST00000477182 RPL38P63173 70 aaKnown RBP10.87□□□□□ -0.67
LSM2-212ENST00000477182 TGM3Q08188 693 aa10.87□□□□□ -0.67
LSM2-212ENST00000477182 ACSM2AQ08AH3 577 aa10.87□□□□□ -0.67
LSM2-212ENST00000477182 NDUFA9Q16795 377 aa10.87□□□□□ -0.67
LSM2-212ENST00000477182 LSM12Q3MHD2 195 aaKnown RBP10.87□□□□□ -0.67
LSM2-212ENST00000477182 C6orf136Q5SQH8 315 aa10.87□□□□□ -0.67
LSM2-212ENST00000477182 B3GNTL1Q67FW5 361 aaPredicted RBP10.87□□□□□ -0.67
LSM2-212ENST00000477182 ACSM2BQ68CK6 577 aa10.87□□□□□ -0.67
LSM2-212ENST00000477182 TLDC1Q6P9B6 456 aa10.87□□□□□ -0.67
LSM2-212ENST00000477182 TRIM40Q6P9F5 258 aa10.87□□□□□ -0.67
LSM2-212ENST00000477182 ABHD17CQ6PCB6 329 aa10.87□□□□□ -0.67
LSM2-212ENST00000477182 XKRXQ6PP77 449 aa10.87□□□□□ -0.67
LSM2-212ENST00000477182 ACAD11Q709F0 780 aa10.87□□□□□ -0.67
LSM2-212ENST00000477182 LARP4Q71RC2 724 aaKnown RBP eCLIP10.87□□□□□ -0.672e-9■■■■■ 29.4
LSM2-212ENST00000477182 ABHD13Q7L211 337 aa10.87□□□□□ -0.67
LSM2-212ENST00000477182 PRSS41Q7RTY9 318 aa10.87□□□□□ -0.67
LSM2-212ENST00000477182 METTL4Q8N3J2 472 aa10.87□□□□□ -0.67
LSM2-212ENST00000477182 ARHGEF39Q8N4T4 335 aa10.87□□□□□ -0.67
LSM2-212ENST00000477182 DTWD1Q8N5C7 304 aa10.87□□□□□ -0.67
LSM2-212ENST00000477182 ACTRT2Q8TDY3 377 aa10.87□□□□□ -0.67
LSM2-212ENST00000477182 CHTF18Q8WVB6 975 aa10.87□□□□□ -0.67
LSM2-212ENST00000477182 C10orf82Q8WW14 230 aa10.87□□□□□ -0.67
LSM2-212ENST00000477182 MAELQ96JY0 434 aaKnown RBP10.87□□□□□ -0.67
LSM2-212ENST00000477182 PPP3R2Q96LZ3 170 aa10.87□□□□□ -0.67
LSM2-212ENST00000477182 TCF7L2Q9NQB0 619 aa10.87□□□□□ -0.67
LSM2-212ENST00000477182 AHSPQ9NZD4 102 aa10.87□□□□□ -0.67
LSM2-212ENST00000477182 SEC16AO15027 2179 aa10.87□□□□□ -0.67
LSM2-212ENST00000477182 FAM221AA4D161 298 aa10.86□□□□□ -0.67
LSM2-212ENST00000477182 ZNF860A6NHJ4 632 aa10.86□□□□□ -0.67
LSM2-212ENST00000477182 PEX12O00623 359 aa10.86□□□□□ -0.67
LSM2-212ENST00000477182 EEDO75530 441 aaKnown RBP10.86□□□□□ -0.67
LSM2-212ENST00000477182 JRKO75564 520 aa10.86□□□□□ -0.67
LSM2-212ENST00000477182 FAM107AO95990 144 aa10.86□□□□□ -0.67
LSM2-212ENST00000477182 GBAP04062 536 aa10.86□□□□□ -0.67
LSM2-212ENST00000477182 PRR35P0CG20 571 aa10.86□□□□□ -0.67
LSM2-212ENST00000477182 SMIM10L1P0DMW3 83 aa10.86□□□□□ -0.67
LSM2-212ENST00000477182 ALOX12P18054 663 aa10.86□□□□□ -0.67
LSM2-212ENST00000477182 LBPP18428 481 aa10.86□□□□□ -0.67
LSM2-212ENST00000477182 IL1RNP18510 177 aa10.86□□□□□ -0.67
LSM2-212ENST00000477182 BSGP35613 385 aa10.86□□□□□ -0.67
LSM2-212ENST00000477182 SSR2P43308 183 aa10.86□□□□□ -0.67
LSM2-212ENST00000477182 EMP3P54852 163 aa10.86□□□□□ -0.67
LSM2-212ENST00000477182 SOX8P57073 446 aa10.86□□□□□ -0.67
LSM2-212ENST00000477182 RAE1P78406 368 aaKnown RBP10.86□□□□□ -0.67
LSM2-212ENST00000477182 BTN3A2P78410 334 aa10.86□□□□□ -0.67
LSM2-212ENST00000477182 MUM1Q2TAK8 710 aa10.86□□□□□ -0.67
LSM2-212ENST00000477182 DEFB134Q4QY38 66 aa10.86□□□□□ -0.67
LSM2-212ENST00000477182 RFTN2Q52LD8 501 aaPredicted RBP10.86□□□□□ -0.67
LSM2-212ENST00000477182 SPIN4Q56A73 249 aa10.86□□□□□ -0.67
LSM2-212ENST00000477182 DCAF10Q5QP82 559 aa10.86□□□□□ -0.67
LSM2-212ENST00000477182 GARNL3Q5VVW2 1013 aa10.86□□□□□ -0.67
LSM2-212ENST00000477182 OR4C11Q6IEV9 310 aa10.86□□□□□ -0.67
LSM2-212ENST00000477182 FAM180AQ6UWF9 173 aa10.86□□□□□ -0.67
LSM2-212ENST00000477182 ZNF793Q6ZN11 406 aa10.86□□□□□ -0.67
LSM2-212ENST00000477182 TTLL10Q6ZVT0 673 aa10.86□□□□□ -0.67
LSM2-212ENST00000477182 COMMD6Q7Z4G1 85 aa10.86□□□□□ -0.67
LSM2-212ENST00000477182 METTL27Q8N6F8 245 aaPredicted RBP10.86□□□□□ -0.67
LSM2-212ENST00000477182 AMER3Q8N944 861 aa10.86□□□□□ -0.67
LSM2-212ENST00000477182 FNDC5Q8NAU1 212 aa10.86□□□□□ -0.67
LSM2-212ENST00000477182 SRFBP1Q8NEF9 429 aaKnown RBP10.86□□□□□ -0.67
LSM2-212ENST00000477182 OR9A4Q8NGU2 314 aa10.86□□□□□ -0.67
LSM2-212ENST00000477182 CEP70Q8NHQ1 597 aa10.86□□□□□ -0.67
LSM2-212ENST00000477182 NANOS1Q8WY41 292 aaKnown RBP10.86□□□□□ -0.67
LSM2-212ENST00000477182 CLIP3Q96DZ5 547 aa10.86□□□□□ -0.67
LSM2-212ENST00000477182 SMIM10Q96HG1 83 aa10.86□□□□□ -0.67
LSM2-212ENST00000477182 RILPQ96NA2 401 aa10.86□□□□□ -0.67
LSM2-212ENST00000477182 QRFPRQ96P65 431 aa10.86□□□□□ -0.67
LSM2-212ENST00000477182 KCNC2Q96PR1 638 aa10.86□□□□□ -0.67
LSM2-212ENST00000477182 SLX1AQ9BQ83 275 aa10.86□□□□□ -0.67
LSM2-212ENST00000477182 TBCDQ9BTW9 1192 aa10.86□□□□□ -0.67
LSM2-212ENST00000477182 NDC1Q9BTX1 674 aa10.86□□□□□ -0.67
LSM2-212ENST00000477182 CCDC28BQ9BUN5 200 aa10.86□□□□□ -0.67
LSM2-212ENST00000477182 C1orf50Q9BV19 199 aa10.86□□□□□ -0.67
LSM2-212ENST00000477182 TMUB1Q9BVT8 246 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms