RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 FEN1P39748 380 aaKnown RBP17.07■□□□□ 0.32
ATG4B-217ENST00000475693 TGM3Q08188 693 aa17.07■□□□□ 0.32
ATG4B-217ENST00000475693 OGFRL1Q5TC84 451 aaPredicted RBP17.07■□□□□ 0.32
ATG4B-217ENST00000475693 C8orf82Q6P1X6 216 aaPredicted RBP17.07■□□□□ 0.32
ATG4B-217ENST00000475693 TMEM151BQ8IW70 566 aa17.07■□□□□ 0.32
ATG4B-217ENST00000475693 PMEPA1Q969W9 287 aa17.07■□□□□ 0.32
ATG4B-217ENST00000475693 MMABQ96EY8 250 aaPredicted RBP17.07■□□□□ 0.32
ATG4B-217ENST00000475693 SERINC2Q96SA4 455 aa17.07■□□□□ 0.32
ATG4B-217ENST00000475693 GPATCH1Q9BRR8 931 aaKnown RBP17.07■□□□□ 0.32
ATG4B-217ENST00000475693 ANKHQ9HCJ1 492 aa17.07■□□□□ 0.32
ATG4B-217ENST00000475693 CMTM6Q9NX76 183 aa17.07■□□□□ 0.32
ATG4B-217ENST00000475693 UTS2RQ9UKP6 389 aa17.07■□□□□ 0.32
ATG4B-217ENST00000475693 HCN4Q9Y3Q4 1203 aa17.07■□□□□ 0.32
ATG4B-217ENST00000475693 SLC22A7Q9Y694 548 aa17.07■□□□□ 0.32
ATG4B-217ENST00000475693 ADAMTS20P59510 1910 aa17.07■□□□□ 0.32
ATG4B-217ENST00000475693 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.06■□□□□ 0.32
ATG4B-217ENST00000475693 ZNF749O43361 778 aa17.06■□□□□ 0.32
ATG4B-217ENST00000475693 PRMT3O60678 531 aa17.06■□□□□ 0.32
ATG4B-217ENST00000475693 LDB3O75112 727 aa17.06■□□□□ 0.32
ATG4B-217ENST00000475693 SCELO95171 688 aa17.06■□□□□ 0.32
ATG4B-217ENST00000475693 CCL4P13236 92 aa17.06■□□□□ 0.32
ATG4B-217ENST00000475693 CPN2P22792 545 aa17.06■□□□□ 0.32
ATG4B-217ENST00000475693 C21orf58P58505 322 aa17.06■□□□□ 0.32
ATG4B-217ENST00000475693 HBA1P69905 142 aa17.06■□□□□ 0.32
ATG4B-217ENST00000475693 SLC14A1Q13336 389 aa17.06■□□□□ 0.32
ATG4B-217ENST00000475693 LSAMPQ13449 338 aa17.06■□□□□ 0.32
ATG4B-217ENST00000475693 HEPACAMQ14CZ8 416 aa17.06■□□□□ 0.32
ATG4B-217ENST00000475693 NANOGP8Q6NSW7 305 aa17.06■□□□□ 0.32
ATG4B-217ENST00000475693 ZNF621Q6ZSS3 439 aa17.06■□□□□ 0.32
ATG4B-217ENST00000475693 EGFL6Q8IUX8 553 aa17.06■□□□□ 0.32
ATG4B-217ENST00000475693 PGAM4Q8N0Y7 254 aa17.06■□□□□ 0.32
ATG4B-217ENST00000475693 CA13Q8N1Q1 262 aa17.06■□□□□ 0.32
ATG4B-217ENST00000475693 SLC38A9Q8NBW4 561 aa17.06■□□□□ 0.32
ATG4B-217ENST00000475693 PNPT1Q8TCS8 783 aaKnown RBP17.06■□□□□ 0.32
ATG4B-217ENST00000475693 TSPEARQ8WU66 669 aa17.06■□□□□ 0.32
ATG4B-217ENST00000475693 PANX1Q96RD7 426 aa17.06■□□□□ 0.32
ATG4B-217ENST00000475693 NANOGQ9H9S0 305 aa17.06■□□□□ 0.32
ATG4B-217ENST00000475693 CLCA2Q9UQC9 943 aa17.06■□□□□ 0.32
ATG4B-217ENST00000475693 CNOT1A5YKK6 2376 aaKnown RBP17.06■□□□□ 0.32
ATG4B-217ENST00000475693 NME4O00746 187 aa17.06■□□□□ 0.32
ATG4B-217ENST00000475693 RFXANKO14593 260 aa17.06■□□□□ 0.32
ATG4B-217ENST00000475693 CHST10O43529 356 aa17.06■□□□□ 0.32
ATG4B-217ENST00000475693 DENRO43583 198 aaKnown RBP17.06■□□□□ 0.32
ATG4B-217ENST00000475693 NME6O75414 186 aaPredicted RBP17.06■□□□□ 0.32
ATG4B-217ENST00000475693 CHN2P52757 468 aa17.06■□□□□ 0.32
ATG4B-217ENST00000475693 STPG1Q5TH74 334 aa17.06■□□□□ 0.32
ATG4B-217ENST00000475693 C16orf89Q6UX73 402 aa17.06■□□□□ 0.32
ATG4B-217ENST00000475693 SLC15A3Q8IY34 581 aa17.06■□□□□ 0.32
ATG4B-217ENST00000475693 FAM9CQ8IZT9 166 aa17.06■□□□□ 0.32
ATG4B-217ENST00000475693 MARVELD2Q8N4S9 558 aa17.06■□□□□ 0.32
ATG4B-217ENST00000475693 DPP10Q8N608 796 aa17.06■□□□□ 0.32
ATG4B-217ENST00000475693 OR5AK3PQ8NH89 298 aa17.06■□□□□ 0.32
ATG4B-217ENST00000475693 PEX11GQ96HA9 241 aa17.06■□□□□ 0.32
ATG4B-217ENST00000475693 ANKRA2Q9H9E1 313 aa17.06■□□□□ 0.32
ATG4B-217ENST00000475693 ACSL6Q9UKU0 697 aa17.06■□□□□ 0.32
ATG4B-217ENST00000475693 PRSS51A0A1B0GVH4 220 aa17.05■□□□□ 0.32
ATG4B-217ENST00000475693 PRORSD1PA6NEY8 169 aa17.05■□□□□ 0.32
ATG4B-217ENST00000475693 H3BNX3 289 aa17.05■□□□□ 0.32
ATG4B-217ENST00000475693 KCNH1O95259 989 aa17.05■□□□□ 0.32
ATG4B-217ENST00000475693 NTRK1P04629 796 aa17.05■□□□□ 0.32
ATG4B-217ENST00000475693 INAVAQ3KP66 663 aa17.05■□□□□ 0.32
ATG4B-217ENST00000475693 MANEAQ5SRI9 462 aa17.05■□□□□ 0.32
ATG4B-217ENST00000475693 TMTC4Q5T4D3 741 aa17.05■□□□□ 0.32
ATG4B-217ENST00000475693 IKBIPQ70UQ0 350 aa17.05■□□□□ 0.32
ATG4B-217ENST00000475693 ASCL5Q7RTU5 278 aa17.05■□□□□ 0.32
ATG4B-217ENST00000475693 IFNEQ86WN2 208 aa17.05■□□□□ 0.32
ATG4B-217ENST00000475693 ICA1LQ8NDH6 482 aa17.05■□□□□ 0.32
ATG4B-217ENST00000475693 CNRIP1Q96F85 164 aaPredicted RBP17.05■□□□□ 0.32
ATG4B-217ENST00000475693 PRPF18Q99633 342 aaKnown RBP17.05■□□□□ 0.32
ATG4B-217ENST00000475693 CGREF1Q99674 301 aa17.05■□□□□ 0.32
ATG4B-217ENST00000475693 CUTCQ9NTM9 273 aa17.05■□□□□ 0.32
ATG4B-217ENST00000475693 TOR4AQ9NXH8 423 aa17.05■□□□□ 0.32
ATG4B-217ENST00000475693 BCAP29Q9UHQ4 241 aa17.05■□□□□ 0.32
ATG4B-217ENST00000475693 CES1P1Q9UKY3 287 aa17.05■□□□□ 0.32
ATG4B-217ENST00000475693 PCDHA9Q9Y5H5 950 aa17.05■□□□□ 0.32
ATG4B-217ENST00000475693 DLL1O00548 723 aa17.05■□□□□ 0.32
ATG4B-217ENST00000475693 PEX2P28328 305 aa17.05■□□□□ 0.32
ATG4B-217ENST00000475693 AQP4P55087 323 aa17.05■□□□□ 0.32
ATG4B-217ENST00000475693 HSPB3Q12988 150 aa17.05■□□□□ 0.32
ATG4B-217ENST00000475693 GAB1Q13480 694 aa17.05■□□□□ 0.32
ATG4B-217ENST00000475693 PDK3Q15120 406 aa17.05■□□□□ 0.32
ATG4B-217ENST00000475693 UGT2A3Q6UWM9 527 aa17.05■□□□□ 0.32
ATG4B-217ENST00000475693 BNC2Q6ZN30 1099 aaPredicted RBP17.05■□□□□ 0.32
ATG4B-217ENST00000475693 CCDC116Q8IYX3 515 aa17.05■□□□□ 0.32
ATG4B-217ENST00000475693 OR4A15Q8NGL6 344 aa17.05■□□□□ 0.32
ATG4B-217ENST00000475693 ROPN1LQ96C74 230 aa17.05■□□□□ 0.32
ATG4B-217ENST00000475693 ITCHQ96J02 903 aa17.05■□□□□ 0.32
ATG4B-217ENST00000475693 PRRX2Q99811 253 aa17.05■□□□□ 0.32
ATG4B-217ENST00000475693 CHRNA10Q9GZZ6 450 aa17.05■□□□□ 0.32
ATG4B-217ENST00000475693 PCDHAC1Q9H158 963 aa17.05■□□□□ 0.32
ATG4B-217ENST00000475693 Q9H521 79 aa17.05■□□□□ 0.32
ATG4B-217ENST00000475693 TMEM45AQ9NWC5 275 aa17.05■□□□□ 0.32
ATG4B-217ENST00000475693 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.05■□□□□ 0.32
ATG4B-217ENST00000475693 EFCAB7A8K855 629 aa17.04■□□□□ 0.32
ATG4B-217ENST00000475693 TSFMP43897 325 aaKnown RBP17.04■□□□□ 0.32
ATG4B-217ENST00000475693 ITGA1P56199 1179 aa17.04■□□□□ 0.32
ATG4B-217ENST00000475693 ZFP36L1Q07352 338 aaKnown RBP17.04■□□□□ 0.32
ATG4B-217ENST00000475693 GRM7Q14831 915 aa17.04■□□□□ 0.32
ATG4B-217ENST00000475693 TRIP10Q15642 601 aa17.04■□□□□ 0.32
ATG4B-217ENST00000475693 TCTE1Q5JU00 501 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms