RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 PAPOLGQ9BWT3 736 aaKnown RBP3.72□□□□□ -1.81
BRCA1-212ENST00000473961 HOXD1Q9GZZ0 328 aa3.72□□□□□ -1.81
BRCA1-212ENST00000473961 WWP1Q9H0M0 922 aa3.72□□□□□ -1.81
BRCA1-212ENST00000473961 DPEP3Q9H4B8 488 aa3.72□□□□□ -1.81
BRCA1-212ENST00000473961 ATP13A3Q9H7F0 1226 aa3.72□□□□□ -1.81
BRCA1-212ENST00000473961 SLC52A3Q9NQ40 469 aa3.72□□□□□ -1.81
BRCA1-212ENST00000473961 CNOT2Q9NZN8 540 aaKnown RBP3.72□□□□□ -1.81
BRCA1-212ENST00000473961 CGNQ9P2M7 1197 aaKnown RBP3.72□□□□□ -1.81
BRCA1-212ENST00000473961 KCNG2Q9UJ96 466 aa3.72□□□□□ -1.81
BRCA1-212ENST00000473961 PLCL2Q9UPR0 1127 aa3.72□□□□□ -1.81
BRCA1-212ENST00000473961 MGAT4BQ9UQ53 548 aa3.72□□□□□ -1.81
BRCA1-212ENST00000473961 WIPI2Q9Y4P8 454 aa3.72□□□□□ -1.81
BRCA1-212ENST00000473961 OR1A2Q9Y585 309 aa3.72□□□□□ -1.81
BRCA1-212ENST00000473961 IBTKQ9P2D0 1353 aaPredicted RBP3.72□□□□□ -1.81
BRCA1-212ENST00000473961 VIRMAQ69YN4 1812 aaKnown RBP3.72□□□□□ -1.81
BRCA1-212ENST00000473961 SYNJ1O43426 1573 aa3.72□□□□□ -1.81
BRCA1-212ENST00000473961 NCAPD2Q15021 1401 aa3.71□□□□□ -1.82
BRCA1-212ENST00000473961 A0A087WZY1 265 aa3.71□□□□□ -1.82
BRCA1-212ENST00000473961 FAM230AA0A1W2PPH8 454 aa3.71□□□□□ -1.82
BRCA1-212ENST00000473961 LGALS8O00214 317 aa3.71□□□□□ -1.82
BRCA1-212ENST00000473961 ANGPT2O15123 496 aa3.71□□□□□ -1.82
BRCA1-212ENST00000473961 CFLARO15519 480 aa3.71□□□□□ -1.82
BRCA1-212ENST00000473961 P2RX6O15547 441 aa3.71□□□□□ -1.82
BRCA1-212ENST00000473961 MLNRO43193 412 aa3.71□□□□□ -1.82
BRCA1-212ENST00000473961 BUB1O43683 1085 aa3.71□□□□□ -1.82
BRCA1-212ENST00000473961 KIAA0513O60268 411 aa3.71□□□□□ -1.82
BRCA1-212ENST00000473961 LMX1BO60663 402 aa3.71□□□□□ -1.82
BRCA1-212ENST00000473961 SMPD2O60906 423 aa3.71□□□□□ -1.82
BRCA1-212ENST00000473961 KHDRBS3O75525 346 aaKnown RBP3.71□□□□□ -1.82
BRCA1-212ENST00000473961 NADKO95544 446 aaPredicted RBP3.71□□□□□ -1.82
BRCA1-212ENST00000473961 TXNDC12O95881 172 aa3.71□□□□□ -1.82
BRCA1-212ENST00000473961 AK1P00568 194 aa3.71□□□□□ -1.82
BRCA1-212ENST00000473961 PRSS56P0CW18 603 aa3.71□□□□□ -1.82
BRCA1-212ENST00000473961 TMOD1P28289 359 aa3.71□□□□□ -1.82
BRCA1-212ENST00000473961 MDH1P40925 334 aaKnown RBP3.71□□□□□ -1.82
BRCA1-212ENST00000473961 CCL11P51671 97 aa3.71□□□□□ -1.82
BRCA1-212ENST00000473961 HSD17B7P56937 341 aa3.71□□□□□ -1.82
BRCA1-212ENST00000473961 CBX1P83916 185 aa3.71□□□□□ -1.82
BRCA1-212ENST00000473961 HSF2Q03933 536 aa3.71□□□□□ -1.82
BRCA1-212ENST00000473961 MSLNQ13421 630 aaPredicted RBP3.71□□□□□ -1.82
BRCA1-212ENST00000473961 HNRNPDQ14103 355 aaKnown RBP3.71□□□□□ -1.82
BRCA1-212ENST00000473961 EXOSC7Q15024 291 aaKnown RBP3.71□□□□□ -1.82
BRCA1-212ENST00000473961 CEBPEQ15744 281 aa3.71□□□□□ -1.82
BRCA1-212ENST00000473961 SPANXN4Q5MJ08 99 aa3.71□□□□□ -1.82
BRCA1-212ENST00000473961 WLSQ5T9L3 541 aa3.71□□□□□ -1.82
BRCA1-212ENST00000473961 CAPN13Q6MZZ7 669 aaPredicted RBP3.71□□□□□ -1.82
BRCA1-212ENST00000473961 ISLR2Q6UXK2 745 aa3.71□□□□□ -1.82
BRCA1-212ENST00000473961 Q6ZVQ6 151 aa3.71□□□□□ -1.82
BRCA1-212ENST00000473961 Q71RC1 249 aaPredicted RBP3.71□□□□□ -1.82
BRCA1-212ENST00000473961 ZNF771Q7L3S4 317 aaPredicted RBP3.71□□□□□ -1.82
BRCA1-212ENST00000473961 BNIPLQ7Z465 357 aa3.71□□□□□ -1.82
BRCA1-212ENST00000473961 YRDCQ86U90 279 aaKnown RBP3.71□□□□□ -1.82
BRCA1-212ENST00000473961 DCUN1D3Q8IWE4 304 aa3.71□□□□□ -1.82
BRCA1-212ENST00000473961 CERS5Q8N5B7 392 aa3.71□□□□□ -1.82
BRCA1-212ENST00000473961 MLKLQ8NB16 471 aa3.71□□□□□ -1.82
BRCA1-212ENST00000473961 DENND6BQ8NEG7 585 aa3.71□□□□□ -1.82
BRCA1-212ENST00000473961 OR5M9Q8NGP3 310 aa3.71□□□□□ -1.82
BRCA1-212ENST00000473961 RPLP0P6Q8NHW5 317 aa3.71□□□□□ -1.82
BRCA1-212ENST00000473961 MRGPRDQ8TDS7 321 aa3.71□□□□□ -1.82
BRCA1-212ENST00000473961 SMAP2Q8WU79 429 aaPredicted RBP3.71□□□□□ -1.82
BRCA1-212ENST00000473961 PHYHIPQ92561 330 aa3.71□□□□□ -1.82
BRCA1-212ENST00000473961 THRSPQ92748 146 aa3.71□□□□□ -1.82
BRCA1-212ENST00000473961 WBP2Q969T9 261 aa3.71□□□□□ -1.82
BRCA1-212ENST00000473961 NCLNQ969V3 563 aa3.71□□□□□ -1.82
BRCA1-212ENST00000473961 MRPL38Q96DV4 380 aaKnown RBP3.71□□□□□ -1.82
BRCA1-212ENST00000473961 ERGIC2Q96RQ1 377 aa3.71□□□□□ -1.82
BRCA1-212ENST00000473961 WRAP53Q9BUR4 548 aaKnown RBP3.71□□□□□ -1.82
BRCA1-212ENST00000473961 FAM124BQ9H5Z6 455 aaPredicted RBP3.71□□□□□ -1.82
BRCA1-212ENST00000473961 RPAP3Q9H6T3 665 aaPredicted RBP3.71□□□□□ -1.82
BRCA1-212ENST00000473961 COG4Q9H9E3 785 aa3.71□□□□□ -1.82
BRCA1-212ENST00000473961 ROPN1Q9HAT0 212 aaPredicted RBP3.71□□□□□ -1.82
BRCA1-212ENST00000473961 GDF3Q9NR23 364 aa3.71□□□□□ -1.82
BRCA1-212ENST00000473961 FARSBQ9NSD9 589 aaKnown RBP3.71□□□□□ -1.82
BRCA1-212ENST00000473961 KLHL8Q9P2G9 620 aaPredicted RBP3.71□□□□□ -1.82
BRCA1-212ENST00000473961 CHMP2BQ9UQN3 213 aa3.71□□□□□ -1.82
BRCA1-212ENST00000473961 INSRP06213 1382 aa3.71□□□□□ -1.82
BRCA1-212ENST00000473961 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.71□□□□□ -1.82
BRCA1-212ENST00000473961 MYOM3Q5VTT5 1437 aa3.7□□□□□ -1.82
BRCA1-212ENST00000473961 POLR1AO95602 1720 aaPredicted RBP3.7□□□□□ -1.82
BRCA1-212ENST00000473961 A0A0U1RRA0 63 aa3.7□□□□□ -1.82
BRCA1-212ENST00000473961 MSGN1A6NI15 193 aa3.7□□□□□ -1.82
BRCA1-212ENST00000473961 KRT86O43790 486 aa3.7□□□□□ -1.82
BRCA1-212ENST00000473961 LRP3O75074 770 aa3.7□□□□□ -1.82
BRCA1-212ENST00000473961 CSDE1O75534 798 aaKnown RBP3.7□□□□□ -1.82
BRCA1-212ENST00000473961 TOM1L1O75674 476 aa3.7□□□□□ -1.82
BRCA1-212ENST00000473961 CEACAM4O75871 244 aa3.7□□□□□ -1.82
BRCA1-212ENST00000473961 MFN2O95140 757 aa3.7□□□□□ -1.82
BRCA1-212ENST00000473961 NXPH2O95156 264 aa3.7□□□□□ -1.82
BRCA1-212ENST00000473961 DIRAS3O95661 229 aa3.7□□□□□ -1.82
BRCA1-212ENST00000473961 PTBP3O95758 552 aaKnown RBP3.7□□□□□ -1.82
BRCA1-212ENST00000473961 RPLP0P05388 317 aaKnown RBP3.7□□□□□ -1.82
BRCA1-212ENST00000473961 CALCBP10092 127 aa3.7□□□□□ -1.82
BRCA1-212ENST00000473961 RRASP10301 218 aa3.7□□□□□ -1.82
BRCA1-212ENST00000473961 GPX3P22352 226 aa3.7□□□□□ -1.82
BRCA1-212ENST00000473961 PPP2R1AP30153 589 aa3.7□□□□□ -1.82
BRCA1-212ENST00000473961 CHRNB4P30926 498 aa3.7□□□□□ -1.82
BRCA1-212ENST00000473961 RPL9P32969 192 aaKnown RBP3.7□□□□□ -1.82
BRCA1-212ENST00000473961 SOX3P41225 446 aa3.7□□□□□ -1.82
BRCA1-212ENST00000473961 MATKP42679 507 aa3.7□□□□□ -1.82
BRCA1-212ENST00000473961 FHITP49789 147 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms