RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 PDRG1Q9NUG6 133 aa1.97□□□□□ -2.09
SSB-208ENST00000468600 CA5BQ9Y2D0 317 aa1.97□□□□□ -2.09
SSB-208ENST00000468600 CDC42BPBQ9Y5S2 1711 aa1.97□□□□□ -2.09
SSB-208ENST00000468600 ARID4BQ4LE39 1312 aaPredicted RBP1.96□□□□□ -2.1
SSB-208ENST00000468600 CFAP65Q6ZU64 1925 aaKnown RBP1.96□□□□□ -2.1
SSB-208ENST00000468600 URADA6NGE7 173 aa1.96□□□□□ -2.1
SSB-208ENST00000468600 ANXA2P2A6NMY6 339 aa1.96□□□□□ -2.1
SSB-208ENST00000468600 TRIM49D1C9J1S8 452 aa1.96□□□□□ -2.1
SSB-208ENST00000468600 LYNP07948 512 aa1.96□□□□□ -2.1
SSB-208ENST00000468600 PSMB4P28070 264 aa1.96□□□□□ -2.1
SSB-208ENST00000468600 ID1P41134 155 aa1.96□□□□□ -2.1
SSB-208ENST00000468600 OR3A1P47881 315 aa1.96□□□□□ -2.1
SSB-208ENST00000468600 MFGE8Q08431 387 aaPredicted RBP1.96□□□□□ -2.1
SSB-208ENST00000468600 ABRQ12979 859 aa1.96□□□□□ -2.1
SSB-208ENST00000468600 LCP2Q13094 533 aa1.96□□□□□ -2.1
SSB-208ENST00000468600 EBI3Q14213 229 aa1.96□□□□□ -2.1
SSB-208ENST00000468600 CDO1Q16878 200 aa1.96□□□□□ -2.1
SSB-208ENST00000468600 TFDP3Q5H9I0 405 aa1.96□□□□□ -2.1
SSB-208ENST00000468600 IRGCQ6NXR0 463 aa1.96□□□□□ -2.1
SSB-208ENST00000468600 PPP1R21Q6ZMI0 780 aa1.96□□□□□ -2.1
SSB-208ENST00000468600 ZNF730Q6ZMV8 503 aa1.96□□□□□ -2.1
SSB-208ENST00000468600 H1FOOQ8IZA3 346 aaPredicted RBP1.96□□□□□ -2.1
SSB-208ENST00000468600 ZNF274Q96GC6 653 aaPredicted RBP1.96□□□□□ -2.1
SSB-208ENST00000468600 OR5M11Q96RB7 305 aa1.96□□□□□ -2.1
SSB-208ENST00000468600 KIR2DL4Q99706 377 aa1.96□□□□□ -2.1
SSB-208ENST00000468600 ELL3Q9HB65 397 aaPredicted RBP1.96□□□□□ -2.1
SSB-208ENST00000468600 KLRF1Q9NZS2 232 aa1.96□□□□□ -2.1
SSB-208ENST00000468600 PFASO15067 1338 aa1.95□□□□□ -2.1
SSB-208ENST00000468600 MAGEB4O15481 346 aaPredicted RBP1.95□□□□□ -2.1
SSB-208ENST00000468600 B4GAT1O43505 415 aa1.95□□□□□ -2.1
SSB-208ENST00000468600 PLOD3O60568 738 aa1.95□□□□□ -2.1
SSB-208ENST00000468600 DUSP11O75319 330 aaKnown RBP1.95□□□□□ -2.1
SSB-208ENST00000468600 OR6A2O95222 327 aa1.95□□□□□ -2.1
SSB-208ENST00000468600 ANKRD34CP0C6C1 535 aa1.95□□□□□ -2.1
SSB-208ENST00000468600 LAMP1P11279 417 aa1.95□□□□□ -2.1
SSB-208ENST00000468600 TIA1P31483 386 aaKnown RBP eCLIP1.95□□□□□ -2.1
SSB-208ENST00000468600 CCR4P51679 360 aa1.95□□□□□ -2.1
SSB-208ENST00000468600 TEFQ10587 303 aa1.95□□□□□ -2.1
SSB-208ENST00000468600 ASAH1Q13510 395 aa1.95□□□□□ -2.1
SSB-208ENST00000468600 COG2Q14746 738 aa1.95□□□□□ -2.1
SSB-208ENST00000468600 KYNUQ16719 465 aa1.95□□□□□ -2.1
SSB-208ENST00000468600 ERN2Q76MJ5 926 aaKnown RBP1.95□□□□□ -2.1
SSB-208ENST00000468600 KIR2DL5BQ8NHK3 375 aa1.95□□□□□ -2.1
SSB-208ENST00000468600 SAP25Q8TEE9 199 aa1.95□□□□□ -2.1
SSB-208ENST00000468600 SNRNP27Q8WVK2 155 aaKnown RBP1.95□□□□□ -2.1
SSB-208ENST00000468600 TCP11Q8WWU5 503 aa1.95□□□□□ -2.1
SSB-208ENST00000468600 SEPT8Q92599 483 aa1.95□□□□□ -2.1
SSB-208ENST00000468600 C16orf74Q96GX8 76 aa1.95□□□□□ -2.1
SSB-208ENST00000468600 ERGIC2Q96RQ1 377 aa1.95□□□□□ -2.1
SSB-208ENST00000468600 SERINC2Q96SA4 455 aa1.95□□□□□ -2.1
SSB-208ENST00000468600 CHMP4AQ9BY43 222 aa1.95□□□□□ -2.1
SSB-208ENST00000468600 UBA5Q9GZZ9 404 aa1.95□□□□□ -2.1
SSB-208ENST00000468600 SPG21Q9NZD8 308 aa1.95□□□□□ -2.1
SSB-208ENST00000468600 CIDEBQ9UHD4 219 aa1.95□□□□□ -2.1
SSB-208ENST00000468600 GTPBP10A4D1E9 387 aaKnown RBP1.94□□□□□ -2.1
SSB-208ENST00000468600 ANKDD1BA6NHY2 528 aa1.94□□□□□ -2.1
SSB-208ENST00000468600 EFCAB7A8K855 629 aa1.94□□□□□ -2.1
SSB-208ENST00000468600 A8MX80 341 aa1.94□□□□□ -2.1
SSB-208ENST00000468600 A8MXE2 369 aa1.94□□□□□ -2.1
SSB-208ENST00000468600 SERF1AO75920 110 aa1.94□□□□□ -2.1
SSB-208ENST00000468600 HSPB1P04792 205 aaKnown RBP1.94□□□□□ -2.1
SSB-208ENST00000468600 SLC35E2P0CK97 266 aa1.94□□□□□ -2.1
SSB-208ENST00000468600 LINC00315P59091 139 aa1.94□□□□□ -2.1
SSB-208ENST00000468600 PTENP60484 403 aa1.94□□□□□ -2.1
SSB-208ENST00000468600 RPL27P61353 136 aaKnown RBP1.94□□□□□ -2.1
SSB-208ENST00000468600 EMC2Q15006 297 aa1.94□□□□□ -2.1
SSB-208ENST00000468600 SHHQ15465 462 aa1.94□□□□□ -2.1
SSB-208ENST00000468600 TCP11X2Q5H9J9 407 aa1.94□□□□□ -2.1
SSB-208ENST00000468600 ZNF658Q5TYW1 1059 aaPredicted RBP1.94□□□□□ -2.1
SSB-208ENST00000468600 TATDN1Q6P1N9 297 aa1.94□□□□□ -2.1
SSB-208ENST00000468600 ALKBH5Q6P6C2 394 aaKnown RBP1.94□□□□□ -2.1
SSB-208ENST00000468600 SCARA5Q6ZMJ2 495 aa1.94□□□□□ -2.1
SSB-208ENST00000468600 CHST3Q7LGC8 479 aa1.94□□□□□ -2.1
SSB-208ENST00000468600 DNAJB7Q7Z6W7 309 aaPredicted RBP1.94□□□□□ -2.1
SSB-208ENST00000468600 ZNF677Q86XU0 584 aa1.94□□□□□ -2.1
SSB-208ENST00000468600 TIGD4Q8IY51 512 aa1.94□□□□□ -2.1
SSB-208ENST00000468600 Q8N9G6 341 aaPredicted RBP1.94□□□□□ -2.1
SSB-208ENST00000468600 LINC01555Q8NAE3 123 aa1.94□□□□□ -2.1
SSB-208ENST00000468600 KCTD6Q8NC69 237 aa1.94□□□□□ -2.1
SSB-208ENST00000468600 ZNF671Q8TAW3 534 aa1.94□□□□□ -2.1
SSB-208ENST00000468600 HEXDCQ8WVB3 486 aa1.94□□□□□ -2.1
SSB-208ENST00000468600 SRSF12Q8WXF0 261 aaKnown RBP1.94□□□□□ -2.1
SSB-208ENST00000468600 CRYGNQ8WXF5 182 aa1.94□□□□□ -2.1
SSB-208ENST00000468600 RMDN1Q96DB5 314 aa1.94□□□□□ -2.1
SSB-208ENST00000468600 C16orf58Q96GQ5 468 aa1.94□□□□□ -2.1
SSB-208ENST00000468600 PIWIL1Q96J94 861 aaKnown RBP1.94□□□□□ -2.1
SSB-208ENST00000468600 NAA11Q9BSU3 229 aaPredicted RBP1.94□□□□□ -2.1
SSB-208ENST00000468600 ST6GALNAC5Q9BVH7 336 aa1.94□□□□□ -2.1
SSB-208ENST00000468600 WWP1Q9H0M0 922 aa1.94□□□□□ -2.1
SSB-208ENST00000468600 ZNF702PQ9H963 129 aa1.94□□□□□ -2.1
SSB-208ENST00000468600 CRCT1Q9UGL9 99 aa1.94□□□□□ -2.1
SSB-208ENST00000468600 APOBEC3BQ9UH17 382 aaKnown RBP1.94□□□□□ -2.1
SSB-208ENST00000468600 CCPG1Q9ULG6 757 aa1.94□□□□□ -2.1
SSB-208ENST00000468600 UBE2CO00762 179 aa1.93□□□□□ -2.1
SSB-208ENST00000468600 PDXKO00764 312 aa1.93□□□□□ -2.1
SSB-208ENST00000468600 NUDT21O43809 227 aaKnown RBP1.93□□□□□ -2.1
SSB-208ENST00000468600 DIAPH2O60879 1101 aa1.93□□□□□ -2.1
SSB-208ENST00000468600 WISP3O95389 354 aaPredicted RBP1.93□□□□□ -2.1
SSB-208ENST00000468600 MMP10P09238 476 aa1.93□□□□□ -2.1
SSB-208ENST00000468600 LBPP18428 481 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms