RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 PTGER4P35408 488 aa13.12□□□□□ -0.31
CCHCR1-211ENST00000467553 ID2Q02363 134 aa13.12□□□□□ -0.31
CCHCR1-211ENST00000467553 STX4Q12846 297 aa13.12□□□□□ -0.31
CCHCR1-211ENST00000467553 CUL3Q13618 768 aa13.12□□□□□ -0.31
CCHCR1-211ENST00000467553 TUBA3CQ13748 450 aa13.12□□□□□ -0.31
CCHCR1-211ENST00000467553 CCDC153Q494R4 210 aa13.12□□□□□ -0.31
CCHCR1-211ENST00000467553 FAM219BQ5XKK7 198 aa13.12□□□□□ -0.31
CCHCR1-211ENST00000467553 TUBA3EQ6PEY2 450 aa13.12□□□□□ -0.31
CCHCR1-211ENST00000467553 GPR180Q86V85 440 aa13.12□□□□□ -0.31
CCHCR1-211ENST00000467553 CRLF3Q8IUI8 442 aa13.12□□□□□ -0.31
CCHCR1-211ENST00000467553 BEST3Q8N1M1 668 aa13.12□□□□□ -0.31
CCHCR1-211ENST00000467553 KIF2BQ8N4N8 673 aa13.12□□□□□ -0.31
CCHCR1-211ENST00000467553 CCNYL1Q8N7R7 359 aa13.12□□□□□ -0.31
CCHCR1-211ENST00000467553 CDYL2Q8N8U2 506 aa13.12□□□□□ -0.31
CCHCR1-211ENST00000467553 MDS2Q8NDY4 140 aa13.12□□□□□ -0.31
CCHCR1-211ENST00000467553 ELP5Q8TE02 316 aa13.12□□□□□ -0.31
CCHCR1-211ENST00000467553 ITLN2Q8WWU7 325 aaPredicted RBP13.12□□□□□ -0.31
CCHCR1-211ENST00000467553 SELENOMQ8WWX9 145 aa13.12□□□□□ -0.31
CCHCR1-211ENST00000467553 SCMH1Q96GD3 660 aa13.12□□□□□ -0.31
CCHCR1-211ENST00000467553 CDCP1Q9H5V8 836 aa13.12□□□□□ -0.31
CCHCR1-211ENST00000467553 FARSBQ9NSD9 589 aaKnown RBP13.12□□□□□ -0.31
CCHCR1-211ENST00000467553 ZNF225Q9UK10 706 aa13.12□□□□□ -0.31
CCHCR1-211ENST00000467553 SNX6Q9UNH7 406 aa13.12□□□□□ -0.31
CCHCR1-211ENST00000467553 ASPDHA6ND91 283 aa13.11□□□□□ -0.31
CCHCR1-211ENST00000467553 SYNDIG1LA6NDD5 238 aa13.11□□□□□ -0.31
CCHCR1-211ENST00000467553 G3V2L1 256 aa13.11□□□□□ -0.31
CCHCR1-211ENST00000467553 CCL21O00585 134 aa13.11□□□□□ -0.31
CCHCR1-211ENST00000467553 PLIN3O60664 434 aa13.11□□□□□ -0.31
CCHCR1-211ENST00000467553 SCELO95171 688 aa13.11□□□□□ -0.31
CCHCR1-211ENST00000467553 PDYNP01213 254 aa13.11□□□□□ -0.31
CCHCR1-211ENST00000467553 GBAP04062 536 aa13.11□□□□□ -0.31
CCHCR1-211ENST00000467553 PROCP04070 461 aa13.11□□□□□ -0.31
CCHCR1-211ENST00000467553 MST1P26927 711 aa13.11□□□□□ -0.31
CCHCR1-211ENST00000467553 BSGP35613 385 aa13.11□□□□□ -0.31
CCHCR1-211ENST00000467553 ARFIP1P53367 373 aa13.11□□□□□ -0.31
CCHCR1-211ENST00000467553 HNRNPH2P55795 449 aaKnown RBP13.11□□□□□ -0.31
CCHCR1-211ENST00000467553 SLC18A2Q05940 514 aa13.11□□□□□ -0.31
CCHCR1-211ENST00000467553 GGTA1PQ4G0N0 100 aa13.11□□□□□ -0.31
CCHCR1-211ENST00000467553 ZYG11AQ6WRX3 759 aa13.11□□□□□ -0.31
CCHCR1-211ENST00000467553 BNC2Q6ZN30 1099 aaPredicted RBP13.11□□□□□ -0.31
CCHCR1-211ENST00000467553 OR4N5Q8IXE1 308 aa13.11□□□□□ -0.31
CCHCR1-211ENST00000467553 EID3Q8N140 333 aa13.11□□□□□ -0.31
CCHCR1-211ENST00000467553 NFAM1Q8NET5 270 aaPredicted RBP13.11□□□□□ -0.31
CCHCR1-211ENST00000467553 MYRIPQ8NFW9 859 aa13.11□□□□□ -0.31
CCHCR1-211ENST00000467553 METTL6Q8TCB7 284 aa13.11□□□□□ -0.31
CCHCR1-211ENST00000467553 CAVIN3Q969G5 261 aa13.11□□□□□ -0.31
CCHCR1-211ENST00000467553 CCDC126Q96EE4 140 aa13.11□□□□□ -0.31
CCHCR1-211ENST00000467553 L3HYPDHQ96EM0 354 aa13.11□□□□□ -0.31
CCHCR1-211ENST00000467553 DEFB126Q9BYW3 111 aa13.11□□□□□ -0.31
CCHCR1-211ENST00000467553 ROPN1BQ9BZX4 212 aaPredicted RBP13.11□□□□□ -0.31
CCHCR1-211ENST00000467553 RPF2Q9H7B2 306 aaKnown RBP13.11□□□□□ -0.31
CCHCR1-211ENST00000467553 ROPN1Q9HAT0 212 aaPredicted RBP13.11□□□□□ -0.31
CCHCR1-211ENST00000467553 MS4A12Q9NXJ0 267 aa13.11□□□□□ -0.31
CCHCR1-211ENST00000467553 AHSPQ9NZD4 102 aa13.11□□□□□ -0.31
CCHCR1-211ENST00000467553 TRPS1Q9UHF7 1281 aa13.11□□□□□ -0.31
CCHCR1-211ENST00000467553 PHF11Q9UIL8 331 aa13.11□□□□□ -0.31
CCHCR1-211ENST00000467553 SLC12A4Q9UP95 1085 aa13.11□□□□□ -0.31
CCHCR1-211ENST00000467553 ATG4BQ9Y4P1 393 aa13.11□□□□□ -0.31
CCHCR1-211ENST00000467553 SLC19A2O60779 497 aa13.1□□□□□ -0.31
CCHCR1-211ENST00000467553 KLK1P06870 262 aa13.1□□□□□ -0.31
CCHCR1-211ENST00000467553 FAM58BPP0C7Q3 252 aa13.1□□□□□ -0.31
CCHCR1-211ENST00000467553 CPA3P15088 417 aa13.1□□□□□ -0.31
CCHCR1-211ENST00000467553 HMOX2P30519 316 aa13.1□□□□□ -0.31
CCHCR1-211ENST00000467553 CD96P40200 585 aa13.1□□□□□ -0.31
CCHCR1-211ENST00000467553 BUD31P41223 144 aaPredicted RBP13.1□□□□□ -0.31
CCHCR1-211ENST00000467553 SMSP52788 366 aa13.1□□□□□ -0.31
CCHCR1-211ENST00000467553 OR1C1Q15619 314 aa13.1□□□□□ -0.31
CCHCR1-211ENST00000467553 TCHHL1Q5QJ38 904 aaPredicted RBP13.1□□□□□ -0.31
CCHCR1-211ENST00000467553 C18orf63Q68DL7 685 aa13.1□□□□□ -0.31
CCHCR1-211ENST00000467553 Q6ZPB1 254 aaPredicted RBP13.1□□□□□ -0.31
CCHCR1-211ENST00000467553 GPRIN3Q6ZVF9 776 aa13.1□□□□□ -0.31
CCHCR1-211ENST00000467553 MRGPRGQ86SM5 289 aa13.1□□□□□ -0.31
CCHCR1-211ENST00000467553 RPS19BP1Q86WX3 136 aaKnown RBP13.1□□□□□ -0.31
CCHCR1-211ENST00000467553 NUDT13Q86X67 352 aa13.1□□□□□ -0.31
CCHCR1-211ENST00000467553 TMEM132CQ8N3T6 1108 aa13.1□□□□□ -0.31
CCHCR1-211ENST00000467553 ZCCHC7Q8N3Z6 543 aaKnown RBP13.1□□□□□ -0.31
CCHCR1-211ENST00000467553 RIBC1Q8N443 379 aaPredicted RBP13.1□□□□□ -0.31
CCHCR1-211ENST00000467553 B3GNT7Q8NFL0 401 aa13.1□□□□□ -0.31
CCHCR1-211ENST00000467553 ANKRD9Q96BM1 317 aaPredicted RBP13.1□□□□□ -0.31
CCHCR1-211ENST00000467553 CCDC120Q96HB5 630 aa13.1□□□□□ -0.31
CCHCR1-211ENST00000467553 GPR137Q96N19 417 aa13.1□□□□□ -0.31
CCHCR1-211ENST00000467553 ZNF382Q96SR6 550 aa13.1□□□□□ -0.31
CCHCR1-211ENST00000467553 HBEGFQ99075 208 aa13.1□□□□□ -0.31
CCHCR1-211ENST00000467553 NPAS2Q99743 824 aa13.1□□□□□ -0.31
CCHCR1-211ENST00000467553 ZNF717Q9BY31 904 aaPredicted RBP13.1□□□□□ -0.31
CCHCR1-211ENST00000467553 MRPL1Q9BYD6 325 aaKnown RBP13.1□□□□□ -0.31
CCHCR1-211ENST00000467553 IQCGQ9H095 443 aaKnown RBP13.1□□□□□ -0.31
CCHCR1-211ENST00000467553 DDX31Q9H8H2 851 aaKnown RBP13.1□□□□□ -0.31
CCHCR1-211ENST00000467553 TRIM45Q9H8W5 580 aaPredicted RBP13.1□□□□□ -0.31
CCHCR1-211ENST00000467553 ADAP2Q9NPF8 381 aa13.1□□□□□ -0.31
CCHCR1-211ENST00000467553 LYARQ9NX58 379 aaKnown RBP13.1□□□□□ -0.31
CCHCR1-211ENST00000467553 PPT2Q9UMR5 302 aa13.1□□□□□ -0.31
CCHCR1-211ENST00000467553 ZNF835Q9Y2P0 537 aa13.1□□□□□ -0.31
CCHCR1-211ENST00000467553 CLDN16Q9Y5I7 305 aa13.1□□□□□ -0.31
CCHCR1-211ENST00000467553 CLCA3PQ9Y6N3 262 aa13.1□□□□□ -0.31
CCHCR1-211ENST00000467553 A0A0A6YYD5 115 aa13.09□□□□□ -0.31
CCHCR1-211ENST00000467553 TRBV11-1A0A0K0K1C0 115 aa13.09□□□□□ -0.31
CCHCR1-211ENST00000467553 A0A1W2PR48 441 aa13.09□□□□□ -0.31
CCHCR1-211ENST00000467553 ARHGAP10A1A4S6 786 aa13.09□□□□□ -0.31
CCHCR1-211ENST00000467553 WASHC1A8K0Z3 465 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms