RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 SCIMPQ6UWF3 145 aa9.11□□□□□ -0.95
RTFDC1-205ENST00000466260 ZYG11AQ6WRX3 759 aa9.11□□□□□ -0.95
RTFDC1-205ENST00000466260 Q6ZS92 163 aa9.11□□□□□ -0.95
RTFDC1-205ENST00000466260 GPRIN3Q6ZVF9 776 aa9.11□□□□□ -0.95
RTFDC1-205ENST00000466260 TRPM8Q7Z2W7 1104 aa9.11□□□□□ -0.95
RTFDC1-205ENST00000466260 LCA5Q86VQ0 697 aa9.11□□□□□ -0.95
RTFDC1-205ENST00000466260 NUDT13Q86X67 352 aa9.11□□□□□ -0.95
RTFDC1-205ENST00000466260 SCUBE1Q8IWY4 988 aa9.11□□□□□ -0.95
RTFDC1-205ENST00000466260 TRIM42Q8IWZ5 723 aa9.11□□□□□ -0.95
RTFDC1-205ENST00000466260 ZNF595Q8IYB9 648 aa9.11□□□□□ -0.95
RTFDC1-205ENST00000466260 BEST3Q8N1M1 668 aa9.11□□□□□ -0.95
RTFDC1-205ENST00000466260 OR1N1Q8NGS0 311 aa9.11□□□□□ -0.95
RTFDC1-205ENST00000466260 C19orf60Q96EN9 201 aa9.11□□□□□ -0.95
RTFDC1-205ENST00000466260 CDCP1Q9H5V8 836 aa9.11□□□□□ -0.95
RTFDC1-205ENST00000466260 CLK4Q9HAZ1 481 aaKnown RBP9.11□□□□□ -0.95
RTFDC1-205ENST00000466260 LYRM4Q9HD34 91 aa9.11□□□□□ -0.95
RTFDC1-205ENST00000466260 KCNK9Q9NPC2 374 aa9.11□□□□□ -0.95
RTFDC1-205ENST00000466260 TRPS1Q9UHF7 1281 aa9.11□□□□□ -0.95
RTFDC1-205ENST00000466260 ZNF225Q9UK10 706 aa9.11□□□□□ -0.95
RTFDC1-205ENST00000466260 GRID1Q9ULK0 1009 aa9.11□□□□□ -0.95
RTFDC1-205ENST00000466260 FIS1Q9Y3D6 152 aa9.11□□□□□ -0.95
RTFDC1-205ENST00000466260 TIMM22Q9Y584 194 aa9.11□□□□□ -0.95
RTFDC1-205ENST00000466260 G3V2L1 256 aa9.1□□□□□ -0.95
RTFDC1-205ENST00000466260 CYR61O00622 381 aa9.1□□□□□ -0.95
RTFDC1-205ENST00000466260 TMPRSS11DO60235 418 aa9.1□□□□□ -0.95
RTFDC1-205ENST00000466260 FGF17O60258 216 aa9.1□□□□□ -0.95
RTFDC1-205ENST00000466260 SNX3O60493 162 aa9.1□□□□□ -0.95
RTFDC1-205ENST00000466260 PLIN3O60664 434 aa9.1□□□□□ -0.95
RTFDC1-205ENST00000466260 VPS4BO75351 444 aa9.1□□□□□ -0.95
RTFDC1-205ENST00000466260 CRCPO75575 148 aa9.1□□□□□ -0.95
RTFDC1-205ENST00000466260 DCTN3O75935 186 aa9.1□□□□□ -0.95
RTFDC1-205ENST00000466260 KLK1P06870 262 aa9.1□□□□□ -0.95
RTFDC1-205ENST00000466260 IMPDH1P20839 514 aa9.1□□□□□ -0.95
RTFDC1-205ENST00000466260 BSGP35613 385 aa9.1□□□□□ -0.95
RTFDC1-205ENST00000466260 BUD31P41223 144 aaPredicted RBP9.1□□□□□ -0.95
RTFDC1-205ENST00000466260 UQCRFS1P47985 274 aa9.1□□□□□ -0.95
RTFDC1-205ENST00000466260 PRKAA2P54646 552 aa9.1□□□□□ -0.95
RTFDC1-205ENST00000466260 HSD17B7P56937 341 aa9.1□□□□□ -0.95
RTFDC1-205ENST00000466260 BTKQ06187 659 aa9.1□□□□□ -0.95
RTFDC1-205ENST00000466260 PCDH1Q08174 1060 aa9.1□□□□□ -0.95
RTFDC1-205ENST00000466260 MEP1AQ16819 746 aa9.1□□□□□ -0.95
RTFDC1-205ENST00000466260 CCDC153Q494R4 210 aa9.1□□□□□ -0.95
RTFDC1-205ENST00000466260 GGTA1PQ4G0N0 100 aa9.1□□□□□ -0.95
RTFDC1-205ENST00000466260 CFAP157Q5JU67 520 aa9.1□□□□□ -0.95
RTFDC1-205ENST00000466260 IGFL2Q6UWQ7 119 aa9.1□□□□□ -0.95
RTFDC1-205ENST00000466260 IGFL3Q6UXB1 125 aa9.1□□□□□ -0.95
RTFDC1-205ENST00000466260 SPATA21Q7Z572 469 aa9.1□□□□□ -0.95
RTFDC1-205ENST00000466260 GPR180Q86V85 440 aa9.1□□□□□ -0.95
RTFDC1-205ENST00000466260 ATCAYQ86WG3 371 aa9.1□□□□□ -0.95
RTFDC1-205ENST00000466260 SUN3Q8TAQ9 357 aa9.1□□□□□ -0.95
RTFDC1-205ENST00000466260 M1APQ8TC57 530 aa9.1□□□□□ -0.95
RTFDC1-205ENST00000466260 METTL6Q8TCB7 284 aa9.1□□□□□ -0.95
RTFDC1-205ENST00000466260 UCN3Q969E3 161 aa9.1□□□□□ -0.95
RTFDC1-205ENST00000466260 NCLNQ969V3 563 aa9.1□□□□□ -0.95
RTFDC1-205ENST00000466260 MIB2Q96AX9 1013 aa9.1□□□□□ -0.95
RTFDC1-205ENST00000466260 SNRNP40Q96DI7 357 aaKnown RBP9.1□□□□□ -0.95
RTFDC1-205ENST00000466260 APOPT1Q96IL0 206 aa9.1□□□□□ -0.95
RTFDC1-205ENST00000466260 ZNF354BQ96LW1 612 aa9.1□□□□□ -0.95
RTFDC1-205ENST00000466260 FAM111AQ96PZ2 611 aa9.1□□□□□ -0.95
RTFDC1-205ENST00000466260 RAB3IPQ96QF0 476 aaPredicted RBP9.1□□□□□ -0.95
RTFDC1-205ENST00000466260 SERPINI1Q99574 410 aa9.1□□□□□ -0.95
RTFDC1-205ENST00000466260 NPAS2Q99743 824 aa9.1□□□□□ -0.95
RTFDC1-205ENST00000466260 C1QTNF3Q9BXJ4 246 aa9.1□□□□□ -0.95
RTFDC1-205ENST00000466260 ALOXE3Q9BYJ1 711 aa9.1□□□□□ -0.95
RTFDC1-205ENST00000466260 GSTO2Q9H4Y5 243 aa9.1□□□□□ -0.95
RTFDC1-205ENST00000466260 RPF2Q9H7B2 306 aaKnown RBP9.1□□□□□ -0.95
RTFDC1-205ENST00000466260 LIN28AQ9H9Z2 209 aaKnown RBP9.1□□□□□ -0.95
RTFDC1-205ENST00000466260 MMP25Q9NPA2 562 aa9.1□□□□□ -0.95
RTFDC1-205ENST00000466260 MID1IP1Q9NPA3 183 aa9.1□□□□□ -0.95
RTFDC1-205ENST00000466260 ADAP2Q9NPF8 381 aa9.1□□□□□ -0.95
RTFDC1-205ENST00000466260 ASF1BQ9NVP2 202 aa9.1□□□□□ -0.95
RTFDC1-205ENST00000466260 LYARQ9NX58 379 aaKnown RBP9.1□□□□□ -0.95
RTFDC1-205ENST00000466260 STMN3Q9NZ72 180 aa9.1□□□□□ -0.95
RTFDC1-205ENST00000466260 KCMF1Q9P0J7 381 aa9.1□□□□□ -0.95
RTFDC1-205ENST00000466260 ABI3Q9P2A4 366 aa9.1□□□□□ -0.95
RTFDC1-205ENST00000466260 TEKT2Q9UIF3 430 aa9.1□□□□□ -0.95
RTFDC1-205ENST00000466260 PHF11Q9UIL8 331 aa9.1□□□□□ -0.95
RTFDC1-205ENST00000466260 VPS4AQ9UN37 437 aa9.1□□□□□ -0.95
RTFDC1-205ENST00000466260 SNX6Q9UNH7 406 aa9.1□□□□□ -0.95
RTFDC1-205ENST00000466260 NTNG1Q9Y2I2 539 aa9.1□□□□□ -0.95
RTFDC1-205ENST00000466260 ATG4BQ9Y4P1 393 aa9.1□□□□□ -0.95
RTFDC1-205ENST00000466260 TLN1Q9Y490 2541 aaKnown RBP9.1□□□□□ -0.95
RTFDC1-205ENST00000466260 A0A0A6YYD5 115 aa9.09□□□□□ -0.95
RTFDC1-205ENST00000466260 OR5H15A6NDH6 313 aa9.09□□□□□ -0.95
RTFDC1-205ENST00000466260 WASHC1A8K0Z3 465 aa9.09□□□□□ -0.95
RTFDC1-205ENST00000466260 GABRR3A8MPY1 467 aa9.09□□□□□ -0.95
RTFDC1-205ENST00000466260 FOXE1O00358 373 aaPredicted RBP9.09□□□□□ -0.95
RTFDC1-205ENST00000466260 MANBAO00462 879 aa9.09□□□□□ -0.95
RTFDC1-205ENST00000466260 CTNSO60931 367 aa9.09□□□□□ -0.95
RTFDC1-205ENST00000466260 SCELO95171 688 aa9.09□□□□□ -0.95
RTFDC1-205ENST00000466260 MLYCDO95822 493 aa9.09□□□□□ -0.95
RTFDC1-205ENST00000466260 AIFM1O95831 613 aa9.09□□□□□ -0.95
RTFDC1-205ENST00000466260 FAM58BPP0C7Q3 252 aa9.09□□□□□ -0.95
RTFDC1-205ENST00000466260 NR2F6P10588 404 aa9.09□□□□□ -0.95
RTFDC1-205ENST00000466260 CPA3P15088 417 aa9.09□□□□□ -0.95
RTFDC1-205ENST00000466260 GNLYP22749 145 aa9.09□□□□□ -0.95
RTFDC1-205ENST00000466260 SERPINB3P29508 390 aa9.09□□□□□ -0.95
RTFDC1-205ENST00000466260 CRHR1P34998 444 aa9.09□□□□□ -0.95
RTFDC1-205ENST00000466260 NAGLUP54802 743 aa9.09□□□□□ -0.95
RTFDC1-205ENST00000466260 FOXA1P55317 472 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms