RNA–Protein interactions for RNA: ENST00000465950.5

SCAF11-205, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-205ENST00000465950 SIX1Q15475 284 aaPredicted RBP9.02□□□□□ -0.97
SCAF11-205ENST00000465950 C5orf22Q49AR2 442 aa9.02□□□□□ -0.97
SCAF11-205ENST00000465950 CCSAPQ6IQ19 270 aaPredicted RBP9.02□□□□□ -0.97
SCAF11-205ENST00000465950 PAPD4Q6PIY7 484 aaKnown RBP9.02□□□□□ -0.97
SCAF11-205ENST00000465950 NDUFAF7Q7L592 441 aa9.02□□□□□ -0.97
SCAF11-205ENST00000465950 C1orf87Q8N0U7 546 aa9.02□□□□□ -0.97
SCAF11-205ENST00000465950 DNAJC5GQ8N7S2 189 aa9.02□□□□□ -0.97
SCAF11-205ENST00000465950 BORCS8Q96FH0 119 aa9.02□□□□□ -0.97
SCAF11-205ENST00000465950 FCRL3Q96P31 734 aaPredicted RBP9.02□□□□□ -0.97
SCAF11-205ENST00000465950 PYCARDQ9ULZ3 195 aa9.02□□□□□ -0.97
SCAF11-205ENST00000465950 PDCD5O14737 125 aa9.02□□□□□ -0.97
SCAF11-205ENST00000465950 PAHP00439 452 aa9.02□□□□□ -0.97
SCAF11-205ENST00000465950 ATP6V1B1P15313 513 aa9.02□□□□□ -0.97
SCAF11-205ENST00000465950 PNLIPP16233 465 aa9.02□□□□□ -0.97
SCAF11-205ENST00000465950 GABRG2P18507 467 aa9.02□□□□□ -0.97
SCAF11-205ENST00000465950 TSFMP43897 325 aaKnown RBP9.02□□□□□ -0.97
SCAF11-205ENST00000465950 DAP3P51398 398 aaKnown RBP9.02□□□□□ -0.97
SCAF11-205ENST00000465950 ARHGAP11AQ6P4F7 1023 aa9.02□□□□□ -0.97
SCAF11-205ENST00000465950 CPSF7Q8N684 471 aaKnown RBP9.02□□□□□ -0.97
SCAF11-205ENST00000465950 SLC25A43Q8WUT9 341 aaPredicted RBP9.02□□□□□ -0.97
SCAF11-205ENST00000465950 OLFM3Q96PB7 478 aa9.02□□□□□ -0.97
SCAF11-205ENST00000465950 TM9SF2Q99805 663 aa9.02□□□□□ -0.97
SCAF11-205ENST00000465950 ZNF559Q9BR84 538 aa9.02□□□□□ -0.97
SCAF11-205ENST00000465950 KIFC1Q9BW19 673 aa9.02□□□□□ -0.97
SCAF11-205ENST00000465950 NUDT9Q9BW91 350 aa9.02□□□□□ -0.97
SCAF11-205ENST00000465950 TMLHEQ9NVH6 421 aa9.02□□□□□ -0.97
SCAF11-205ENST00000465950 RNF13O43567 381 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 ATE1O95260 518 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 CCNOP22674 350 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 PRLHRP49683 370 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 POLR2JP52435 117 aaKnown RBP9.01□□□□□ -0.97
SCAF11-205ENST00000465950 NXPH1P58417 271 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 GAB1Q13480 694 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 ATP1A4Q13733 1029 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 EXOC3L2Q2M3D2 409 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 FSTL4Q6MZW2 842 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 GHDCQ8N2G8 530 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 GLIS3Q8NEA6 775 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 OR4D9Q8NGE8 314 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 TWIST2Q8WVJ9 160 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 FBXL20Q96IG2 436 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 TRNT1Q96Q11 434 aaKnown RBP9.01□□□□□ -0.97
SCAF11-205ENST00000465950 FETUBQ9UGM5 382 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 YARS2Q9Y2Z4 477 aaKnown RBP9.01□□□□□ -0.97
SCAF11-205ENST00000465950 TMEM14AQ9Y6G1 99 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 ENO4A6NNW6 628 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 ADAM12O43184 909 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 NIPSNAP2O75323 286 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 MTRF1O75570 445 aaKnown RBP9.01□□□□□ -0.97
SCAF11-205ENST00000465950 SLC6A4P31645 630 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 GABRA3P34903 492 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 TGFBR2P37173 567 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 GALNT6Q8NCL4 622 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 DDHD1Q8NEL9 900 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 HPS1Q92902 700 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 PDCD10Q9BUL8 212 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 ELOVL3Q9HB03 270 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 KCNIP1Q9NZI2 227 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 CNIH4Q9P003 139 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 NAALAD2Q9Y3Q0 740 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 SULT2B1O00204 365 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 HCN1O60741 890 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 CRHR1P34998 444 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 FAUP35544 74 aaKnown RBP9.01□□□□□ -0.97
SCAF11-205ENST00000465950 OR1D5P58170 312 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 TBPL1P62380 186 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 CRADDP78560 199 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 DPTQ07507 201 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 PDK3Q15120 406 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 SNAPC1Q16533 368 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 LILRA6Q6PI73 481 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 CEP97Q8IW35 865 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 KLHDC8AQ8IYD2 350 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 C1orf52Q8N6N3 182 aaKnown RBP9.01□□□□□ -0.97
SCAF11-205ENST00000465950 POC5Q8NA72 575 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 MFSD9Q8NBP5 474 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 BRIX1Q8TDN6 353 aaKnown RBP9.01□□□□□ -0.97
SCAF11-205ENST00000465950 HAVCR2Q8TDQ0 301 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 UBL7Q96S82 380 aaPredicted RBP9.01□□□□□ -0.97
SCAF11-205ENST00000465950 PKP4Q99569 1192 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 ARNT2Q9HBZ2 717 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 ATP6AP2A0A1C7CYW4 349 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 hCG_1807616A0A1W2PRN6 198 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 HTR3EA5X5Y0 456 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 HSPB2A8KAH6 182 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 ATP6AP2O75787 350 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 STK17BO94768 372 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 FAM58BPP0C7Q3 252 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 FPR1P21462 350 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 DNASE1P24855 282 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 NMBRP28336 390 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 SHC2P98077 582 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 HSPB2Q16082 182 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 SPIN3Q5JUX0 258 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 THAP3Q8WTV1 239 aaPredicted RBP9.01□□□□□ -0.97
SCAF11-205ENST00000465950 TLR10Q9BXR5 811 aa9.01□□□□□ -0.97
SCAF11-205ENST00000465950 IGHV1OR15-9A0A0B4J2B8 117 aa9□□□□□ -0.97
SCAF11-205ENST00000465950 YY2O15391 372 aa9□□□□□ -0.97
SCAF11-205ENST00000465950 TBX1O43435 398 aa9□□□□□ -0.97
SCAF11-205ENST00000465950 FAM20BO75063 409 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms