RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 SLC28A1O00337 649 aa19■□□□□ 0.63
SKA3-205ENST00000465471 PCDH7O60245 1069 aa19■□□□□ 0.63
SKA3-205ENST00000465471 NEFHP12036 1026 aa19■□□□□ 0.63
SKA3-205ENST00000465471 GPR143P51810 404 aa19■□□□□ 0.63
SKA3-205ENST00000465471 FOLH1Q04609 750 aa19■□□□□ 0.63
SKA3-205ENST00000465471 STX4Q12846 297 aa19■□□□□ 0.63
SKA3-205ENST00000465471 BIKQ13323 160 aa19■□□□□ 0.63
SKA3-205ENST00000465471 KIAA0040Q15053 153 aa19■□□□□ 0.63
SKA3-205ENST00000465471 ELAVL1Q15717 326 aaKnown RBP19■□□□□ 0.63
SKA3-205ENST00000465471 IMPG1Q17R60 797 aa19■□□□□ 0.63
SKA3-205ENST00000465471 XKR7Q5GH72 579 aa19■□□□□ 0.63
SKA3-205ENST00000465471 H3F3CQ6NXT2 135 aa19■□□□□ 0.63
SKA3-205ENST00000465471 IGFL3Q6UXB1 125 aa19■□□□□ 0.63
SKA3-205ENST00000465471 ASB18Q6ZVZ8 466 aa19■□□□□ 0.63
SKA3-205ENST00000465471 HPS6Q86YV9 775 aa19■□□□□ 0.63
SKA3-205ENST00000465471 FAM76AQ8TAV0 307 aa19■□□□□ 0.63
SKA3-205ENST00000465471 BRIX1Q8TDN6 353 aaKnown RBP19■□□□□ 0.63
SKA3-205ENST00000465471 ELP5Q8TE02 316 aa19■□□□□ 0.63
SKA3-205ENST00000465471 UCN3Q969E3 161 aa19■□□□□ 0.63
SKA3-205ENST00000465471 ZNF395Q9H8N7 513 aaPredicted RBP19■□□□□ 0.63
SKA3-205ENST00000465471 WDR41Q9HAD4 459 aa19■□□□□ 0.63
SKA3-205ENST00000465471 ZNF446Q9NWS9 450 aa19■□□□□ 0.63
SKA3-205ENST00000465471 NKIRAS1Q9NYS0 192 aa19■□□□□ 0.63
SKA3-205ENST00000465471 CES1P1Q9UKY3 287 aa19■□□□□ 0.63
SKA3-205ENST00000465471 FIS1Q9Y3D6 152 aa19■□□□□ 0.63
SKA3-205ENST00000465471 PCDHA9Q9Y5H5 950 aa19■□□□□ 0.63
SKA3-205ENST00000465471 GLOD5A6NK44 160 aa18.99■□□□□ 0.63
SKA3-205ENST00000465471 WASHC1A8K0Z3 465 aa18.99■□□□□ 0.63
SKA3-205ENST00000465471 PGRMC2O15173 223 aa18.99■□□□□ 0.63
SKA3-205ENST00000465471 RGS14O43566 566 aa18.99■□□□□ 0.63
SKA3-205ENST00000465471 GUCY1B2O75343 617 aa18.99■□□□□ 0.63
SKA3-205ENST00000465471 HSPA4LO95757 839 aa18.99■□□□□ 0.63
SKA3-205ENST00000465471 GPR75O95800 540 aa18.99■□□□□ 0.63
SKA3-205ENST00000465471 PRB1P04280 392 aa18.99■□□□□ 0.63
SKA3-205ENST00000465471 ALPPP05187 535 aa18.99■□□□□ 0.63
SKA3-205ENST00000465471 GSTM5P46439 218 aa18.99■□□□□ 0.63
SKA3-205ENST00000465471 STT3AP46977 705 aa18.99■□□□□ 0.63
SKA3-205ENST00000465471 ID2Q02363 134 aa18.99■□□□□ 0.63
SKA3-205ENST00000465471 CRB2Q5IJ48 1285 aa18.99■□□□□ 0.63
SKA3-205ENST00000465471 AGAP7PQ5VUJ5 663 aa18.99■□□□□ 0.63
SKA3-205ENST00000465471 IRAK1BP1Q5VVH5 260 aa18.99■□□□□ 0.63
SKA3-205ENST00000465471 OR4N5Q8IXE1 308 aa18.99■□□□□ 0.63
SKA3-205ENST00000465471 APCDD1LQ8NCL9 501 aa18.99■□□□□ 0.63
SKA3-205ENST00000465471 AGR3Q8TD06 166 aa18.99■□□□□ 0.63
SKA3-205ENST00000465471 PTPMT1Q8WUK0 201 aaPredicted RBP18.99■□□□□ 0.63
SKA3-205ENST00000465471 FCRL1Q96LA6 429 aa18.99■□□□□ 0.63
SKA3-205ENST00000465471 AGAP4Q96P64 663 aa18.99■□□□□ 0.63
SKA3-205ENST00000465471 PNO1Q9NRX1 252 aaKnown RBP18.99■□□□□ 0.63
SKA3-205ENST00000465471 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.99■□□□□ 0.63
SKA3-205ENST00000465471 C1orf226A1L170 272 aa18.98■□□□□ 0.63
SKA3-205ENST00000465471 A8MUA0 341 aa18.98■□□□□ 0.63
SKA3-205ENST00000465471 HMGB1P1B2RPK0 211 aaPredicted RBP18.98■□□□□ 0.63
SKA3-205ENST00000465471 PIP5K1BO14986 540 aa18.98■□□□□ 0.63
SKA3-205ENST00000465471 MYO1DO94832 1006 aa18.98■□□□□ 0.63
SKA3-205ENST00000465471 SLC1A6P48664 564 aa18.98■□□□□ 0.63
SKA3-205ENST00000465471 BTKQ06187 659 aa18.98■□□□□ 0.63
SKA3-205ENST00000465471 BST1Q10588 318 aa18.98■□□□□ 0.63
SKA3-205ENST00000465471 SPDYAQ5MJ70 313 aa18.98■□□□□ 0.63
SKA3-205ENST00000465471 SLC48A1Q6P1K1 146 aa18.98■□□□□ 0.63
SKA3-205ENST00000465471 MMP21Q8N119 569 aa18.98■□□□□ 0.63
SKA3-205ENST00000465471 ZNF843Q8N446 348 aa18.98■□□□□ 0.63
SKA3-205ENST00000465471 ZNF781Q8N8C0 355 aa18.98■□□□□ 0.63
SKA3-205ENST00000465471 B3GNT7Q8NFL0 401 aa18.98■□□□□ 0.63
SKA3-205ENST00000465471 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.98■□□□□ 0.63
SKA3-205ENST00000465471 RAB3IL1Q8TBN0 382 aa18.98■□□□□ 0.63
SKA3-205ENST00000465471 MGARPQ8TDB4 240 aa18.98■□□□□ 0.63
SKA3-205ENST00000465471 PAIP2Q9BPZ3 127 aaKnown RBP18.98■□□□□ 0.63
SKA3-205ENST00000465471 ZBTB20Q9HC78 741 aaPredicted RBP18.98■□□□□ 0.63
SKA3-205ENST00000465471 C1orf109Q9NX04 203 aa18.98■□□□□ 0.63
SKA3-205ENST00000465471 RAP2CQ9Y3L5 183 aa18.98■□□□□ 0.63
SKA3-205ENST00000465471 UQCRHLA0A096LP55 91 aa18.97■□□□□ 0.63
SKA3-205ENST00000465471 MYOCOSA0A1B0GUC4 107 aa18.97■□□□□ 0.63
SKA3-205ENST00000465471 LSM1O15116 133 aaKnown RBP18.97■□□□□ 0.63
SKA3-205ENST00000465471 SNNO75324 88 aaPredicted RBP18.97■□□□□ 0.63
SKA3-205ENST00000465471 UQCRHP07919 91 aa18.97■□□□□ 0.63
SKA3-205ENST00000465471 LINC00032P0C843 101 aa18.97■□□□□ 0.63
SKA3-205ENST00000465471 ZNF763Q0D2J5 394 aa18.97■□□□□ 0.63
SKA3-205ENST00000465471 STX3Q13277 289 aa18.97■□□□□ 0.63
SKA3-205ENST00000465471 MFAP5Q13361 173 aa18.97■□□□□ 0.63
SKA3-205ENST00000465471 ISLR2Q6UXK2 745 aa18.97■□□□□ 0.63
SKA3-205ENST00000465471 ST13P4Q8IZP2 240 aaPredicted RBP18.97■□□□□ 0.63
SKA3-205ENST00000465471 TMEM132CQ8N3T6 1108 aa18.97■□□□□ 0.63
SKA3-205ENST00000465471 SIRT6Q8N6T7 355 aa18.97■□□□□ 0.63
SKA3-205ENST00000465471 OR14A16Q8NHC5 309 aa18.97■□□□□ 0.63
SKA3-205ENST00000465471 C16orf78Q8WTQ4 265 aa18.97■□□□□ 0.63
SKA3-205ENST00000465471 LMF1Q96S06 567 aa18.97■□□□□ 0.63
SKA3-205ENST00000465471 CCT7Q99832 543 aa18.97■□□□□ 0.63
SKA3-205ENST00000465471 EBPLQ9BY08 206 aa18.97■□□□□ 0.63
SKA3-205ENST00000465471 LRTM1Q9HBL6 345 aa18.97■□□□□ 0.63
SKA3-205ENST00000465471 HEY2Q9UBP5 337 aa18.97■□□□□ 0.63
SKA3-205ENST00000465471 ZNF223Q9UK11 482 aaPredicted RBP18.97■□□□□ 0.63
SKA3-205ENST00000465471 GNG14A0A1W2PPG7 69 aa18.96■□□□□ 0.63
SKA3-205ENST00000465471 DDAH2O95865 285 aa18.96■□□□□ 0.63
SKA3-205ENST00000465471 IFNA16P05015 189 aa18.96■□□□□ 0.63
SKA3-205ENST00000465471 IL3P08700 152 aa18.96■□□□□ 0.63
SKA3-205ENST00000465471 ANXA4P09525 319 aaPredicted RBP18.96■□□□□ 0.63
SKA3-205ENST00000465471 ALOX15P16050 662 aaPredicted RBP18.96■□□□□ 0.63
SKA3-205ENST00000465471 GALNSP34059 522 aa18.96■□□□□ 0.63
SKA3-205ENST00000465471 CD97P48960 835 aa18.96■□□□□ 0.63
SKA3-205ENST00000465471 TAS2R50P59544 299 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms