RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 LYARQ9NX58 379 aaKnown RBP11.13□□□□□ -0.63
APTX-213ENST00000465003 PHF11Q9UIL8 331 aa11.13□□□□□ -0.63
APTX-213ENST00000465003 SPACA6W5XKT8 324 aa11.13□□□□□ -0.63
APTX-213ENST00000465003 TCRBV16S1A1N1A0A5B0 115 aa11.12□□□□□ -0.63
APTX-213ENST00000465003 HRKO00198 91 aa11.12□□□□□ -0.63
APTX-213ENST00000465003 SLC28A1O00337 649 aa11.12□□□□□ -0.63
APTX-213ENST00000465003 CLDN4O14493 209 aa11.12□□□□□ -0.63
APTX-213ENST00000465003 AKAP10O43572 662 aa11.12□□□□□ -0.63
APTX-213ENST00000465003 ERAL1O75616 437 aaKnown RBP11.12□□□□□ -0.63
APTX-213ENST00000465003 F10P00742 488 aa11.12□□□□□ -0.63
APTX-213ENST00000465003 CD63P08962 238 aa11.12□□□□□ -0.63
APTX-213ENST00000465003 ITGA3P26006 1051 aa11.12□□□□□ -0.63
APTX-213ENST00000465003 PTGR1Q14914 329 aa11.12□□□□□ -0.63
APTX-213ENST00000465003 BTBD16Q32M84 506 aa11.12□□□□□ -0.63
APTX-213ENST00000465003 FCRLBQ6BAA4 426 aa11.12□□□□□ -0.63
APTX-213ENST00000465003 WDR75Q8IWA0 830 aaKnown RBP11.12□□□□□ -0.63
APTX-213ENST00000465003 ZNF595Q8IYB9 648 aa11.12□□□□□ -0.63
APTX-213ENST00000465003 SIRT6Q8N6T7 355 aa11.12□□□□□ -0.63
APTX-213ENST00000465003 FNDC5Q8NAU1 212 aa11.12□□□□□ -0.63
APTX-213ENST00000465003 PLPP5Q8NEB5 264 aa11.12□□□□□ -0.63
APTX-213ENST00000465003 FDCSPQ8NFU4 85 aa11.12□□□□□ -0.63
APTX-213ENST00000465003 THAP4Q8WY91 577 aa11.12□□□□□ -0.63
APTX-213ENST00000465003 TTC9Q92623 222 aa11.12□□□□□ -0.63
APTX-213ENST00000465003 MARK4Q96L34 752 aa11.12□□□□□ -0.63
APTX-213ENST00000465003 ARHGAP9Q9BRR9 750 aa11.12□□□□□ -0.63
APTX-213ENST00000465003 SEMA4CQ9C0C4 833 aa11.12□□□□□ -0.63
APTX-213ENST00000465003 AKTIPQ9H8T0 292 aa11.12□□□□□ -0.63
APTX-213ENST00000465003 MCM8Q9UJA3 840 aa11.12□□□□□ -0.63
APTX-213ENST00000465003 MRPS33Q9Y291 106 aaKnown RBP11.12□□□□□ -0.63
APTX-213ENST00000465003 SERTM1A2A2V5 107 aa11.12□□□□□ -0.63
APTX-213ENST00000465003 PRKNO60260 465 aaPredicted RBP11.12□□□□□ -0.63
APTX-213ENST00000465003 PDGFAP04085 211 aa11.12□□□□□ -0.63
APTX-213ENST00000465003 SDC1P18827 310 aa11.12□□□□□ -0.63
APTX-213ENST00000465003 EFNA1P20827 205 aaPredicted RBP11.12□□□□□ -0.63
APTX-213ENST00000465003 FEN1P39748 380 aaKnown RBP11.12□□□□□ -0.63
APTX-213ENST00000465003 PGDP52209 483 aa11.12□□□□□ -0.63
APTX-213ENST00000465003 HSD17B7P56937 341 aa11.12□□□□□ -0.63
APTX-213ENST00000465003 ACTN3Q08043 901 aaPredicted RBP11.12□□□□□ -0.63
APTX-213ENST00000465003 ZNF763Q0D2J5 394 aa11.12□□□□□ -0.63
APTX-213ENST00000465003 ATP6AP1LQ52LC2 224 aa11.12□□□□□ -0.63
APTX-213ENST00000465003 C6orf136Q5SQH8 315 aa11.12□□□□□ -0.63
APTX-213ENST00000465003 CLEC1AQ8NC01 280 aa11.12□□□□□ -0.63
APTX-213ENST00000465003 DNAJB14Q8TBM8 379 aa11.12□□□□□ -0.63
APTX-213ENST00000465003 APOBEC4Q8WW27 367 aaKnown RBP11.12□□□□□ -0.63
APTX-213ENST00000465003 CKAP2Q8WWK9 683 aa11.12□□□□□ -0.63
APTX-213ENST00000465003 EXOSC8Q96B26 276 aaKnown RBP11.12□□□□□ -0.63
APTX-213ENST00000465003 THOC3Q96J01 351 aaKnown RBP11.12□□□□□ -0.63
APTX-213ENST00000465003 NUDT9Q9BW91 350 aa11.12□□□□□ -0.63
APTX-213ENST00000465003 ZBTB20Q9HC78 741 aaPredicted RBP11.12□□□□□ -0.63
APTX-213ENST00000465003 MED4Q9NPJ6 270 aa11.12□□□□□ -0.63
APTX-213ENST00000465003 ZNF71Q9NQZ8 489 aaPredicted RBP11.12□□□□□ -0.63
APTX-213ENST00000465003 ADAM29Q9UKF5 820 aa11.12□□□□□ -0.63
APTX-213ENST00000465003 EXO1Q9UQ84 846 aaKnown RBP11.12□□□□□ -0.63
APTX-213ENST00000465003 LOC102723996A0A087X1L8 192 aa11.11□□□□□ -0.63
APTX-213ENST00000465003 TCP11X1B4DZS4 312 aa11.11□□□□□ -0.63
APTX-213ENST00000465003 CTNSO60931 367 aa11.11□□□□□ -0.63
APTX-213ENST00000465003 NME6O75414 186 aaPredicted RBP11.11□□□□□ -0.63
APTX-213ENST00000465003 ITGAMP11215 1152 aa11.11□□□□□ -0.63
APTX-213ENST00000465003 IL10P22301 178 aa11.11□□□□□ -0.63
APTX-213ENST00000465003 CALRP27797 417 aaKnown RBP11.11□□□□□ -0.63
APTX-213ENST00000465003 TLX1P31314 330 aaPredicted RBP11.11□□□□□ -0.63
APTX-213ENST00000465003 DIO3P55073 304 aa11.11□□□□□ -0.63
APTX-213ENST00000465003 NME5P56597 212 aa11.11□□□□□ -0.63
APTX-213ENST00000465003 SLC9B1Q4ZJI4 515 aa11.11□□□□□ -0.63
APTX-213ENST00000465003 CRTC2Q53ET0 693 aaPredicted RBP11.11□□□□□ -0.63
APTX-213ENST00000465003 B3GNTL1Q67FW5 361 aaPredicted RBP11.11□□□□□ -0.63
APTX-213ENST00000465003 NDUFAF7Q7L592 441 aa11.11□□□□□ -0.63
APTX-213ENST00000465003 TRIM42Q8IWZ5 723 aa11.11□□□□□ -0.63
APTX-213ENST00000465003 LIX1Q8N485 282 aa11.11□□□□□ -0.63
APTX-213ENST00000465003 EXD3Q8N9H8 876 aa11.11□□□□□ -0.63
APTX-213ENST00000465003 SIMC1Q8NDZ2 872 aa11.11□□□□□ -0.63
APTX-213ENST00000465003 ADCY4Q8NFM4 1077 aa11.11□□□□□ -0.63
APTX-213ENST00000465003 BRIX1Q8TDN6 353 aaKnown RBP11.11□□□□□ -0.63
APTX-213ENST00000465003 THAP3Q8WTV1 239 aaPredicted RBP11.11□□□□□ -0.63
APTX-213ENST00000465003 KLHL29Q96CT2 875 aa11.11□□□□□ -0.63
APTX-213ENST00000465003 BBC3Q96PG8 261 aaPredicted RBP11.11□□□□□ -0.63
APTX-213ENST00000465003 ANKRA2Q9H9E1 313 aa11.11□□□□□ -0.63
APTX-213ENST00000465003 LIN28AQ9H9Z2 209 aaKnown RBP11.11□□□□□ -0.63
APTX-213ENST00000465003 MS4A12Q9NXJ0 267 aa11.11□□□□□ -0.63
APTX-213ENST00000465003 HAO1Q9UJM8 370 aa11.11□□□□□ -0.63
APTX-213ENST00000465003 G3BP2Q9UN86 482 aaKnown RBP11.11□□□□□ -0.63
APTX-213ENST00000465003 IGSF10Q6WRI0 2623 aa11.11□□□□□ -0.63
APTX-213ENST00000465003 C9JVG2 144 aa11.1□□□□□ -0.63
APTX-213ENST00000465003 SDHDO14521 159 aa11.1□□□□□ -0.63
APTX-213ENST00000465003 KLF11O14901 512 aa11.1□□□□□ -0.63
APTX-213ENST00000465003 MAN1A2O60476 641 aa11.1□□□□□ -0.63
APTX-213ENST00000465003 BCKDHAP12694 445 aa11.1□□□□□ -0.63
APTX-213ENST00000465003 ARFIP1P53367 373 aa11.1□□□□□ -0.63
APTX-213ENST00000465003 ZNF33BQ06732 778 aa11.1□□□□□ -0.63
APTX-213ENST00000465003 C2orf80Q0P641 193 aa11.1□□□□□ -0.63
APTX-213ENST00000465003 LTB4RQ15722 352 aa11.1□□□□□ -0.63
APTX-213ENST00000465003 IL23RQ5VWK5 629 aa11.1□□□□□ -0.63
APTX-213ENST00000465003 TMEM198Q66K66 360 aa11.1□□□□□ -0.63
APTX-213ENST00000465003 GALNT18Q6P9A2 607 aa11.1□□□□□ -0.63
APTX-213ENST00000465003 C16orf47Q6ZP98 133 aaPredicted RBP11.1□□□□□ -0.63
APTX-213ENST00000465003 TMEM132CQ8N3T6 1108 aa11.1□□□□□ -0.63
APTX-213ENST00000465003 GALNT16Q8N428 558 aa11.1□□□□□ -0.63
APTX-213ENST00000465003 TMEM102Q8N9M5 508 aaPredicted RBP11.1□□□□□ -0.63
APTX-213ENST00000465003 RAB3IL1Q8TBN0 382 aa11.1□□□□□ -0.63
APTX-213ENST00000465003 PIWIL2Q8TC59 973 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms