RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 CTSSP25774 331 aa13.3□□□□□ -0.28
SMC1A-204ENST00000463684 CERS1P27544 350 aa13.3□□□□□ -0.28
SMC1A-204ENST00000463684 GABRB3P28472 473 aa13.3□□□□□ -0.28
SMC1A-204ENST00000463684 AGFG1P52594 562 aaKnown RBP13.3□□□□□ -0.28
SMC1A-204ENST00000463684 SLBPQ14493 270 aaKnown RBP eCLIP13.3□□□□□ -0.28
SMC1A-204ENST00000463684 Q5PR19 223 aa13.3□□□□□ -0.28
SMC1A-204ENST00000463684 NSUN5P2Q63ZY6 315 aa13.3□□□□□ -0.28
SMC1A-204ENST00000463684 ADGRD1Q6QNK2 874 aa13.3□□□□□ -0.28
SMC1A-204ENST00000463684 CAPN12Q6ZSI9 719 aa13.3□□□□□ -0.28
SMC1A-204ENST00000463684 CXorf67Q86X51 503 aaPredicted RBP13.3□□□□□ -0.28
SMC1A-204ENST00000463684 LRRC75A-AS1Q8N1F1 130 aa13.3□□□□□ -0.28
SMC1A-204ENST00000463684 VWA5B2Q8N398 1253 aa13.3□□□□□ -0.28
SMC1A-204ENST00000463684 ZNF721Q8TF20 911 aa13.3□□□□□ -0.28
SMC1A-204ENST00000463684 NANOS1Q8WY41 292 aaKnown RBP13.3□□□□□ -0.28
SMC1A-204ENST00000463684 SPACA9Q96E40 222 aaPredicted RBP13.3□□□□□ -0.28
SMC1A-204ENST00000463684 PDLIM5Q96HC4 596 aaKnown RBP13.3□□□□□ -0.28
SMC1A-204ENST00000463684 DACH2Q96NX9 599 aa13.3□□□□□ -0.28
SMC1A-204ENST00000463684 TRIB1Q96RU8 372 aa13.3□□□□□ -0.28
SMC1A-204ENST00000463684 DOHHQ9BU89 302 aa13.3□□□□□ -0.28
SMC1A-204ENST00000463684 CAMK2AQ9UQM7 478 aa13.3□□□□□ -0.28
SMC1A-204ENST00000463684 EIF3LQ9Y262 564 aaKnown RBP13.3□□□□□ -0.28
SMC1A-204ENST00000463684 VWA7Q9Y334 891 aa13.3□□□□□ -0.28
SMC1A-204ENST00000463684 SPACA6W5XKT8 324 aa13.3□□□□□ -0.28
SMC1A-204ENST00000463684 LRRC3CA6NJW4 275 aa13.29□□□□□ -0.28
SMC1A-204ENST00000463684 SMAD7O15105 426 aaKnown RBP13.29□□□□□ -0.28
SMC1A-204ENST00000463684 WDR47O94967 919 aa13.29□□□□□ -0.28
SMC1A-204ENST00000463684 C1QAP02745 245 aa13.29□□□□□ -0.28
SMC1A-204ENST00000463684 PGAM1P18669 254 aa13.29□□□□□ -0.28
SMC1A-204ENST00000463684 SERPINB3P29508 390 aa13.29□□□□□ -0.28
SMC1A-204ENST00000463684 MSH2P43246 934 aa13.29□□□□□ -0.28
SMC1A-204ENST00000463684 MAGEA3P43357 314 aa13.29□□□□□ -0.28
SMC1A-204ENST00000463684 RPL21P46778 160 aaKnown RBP13.29□□□□□ -0.28
SMC1A-204ENST00000463684 HNMTP50135 292 aa13.29□□□□□ -0.28
SMC1A-204ENST00000463684 CRYZQ08257 329 aaKnown RBP13.29□□□□□ -0.28
SMC1A-204ENST00000463684 CRYMQ14894 314 aa13.29□□□□□ -0.28
SMC1A-204ENST00000463684 ADPRMQ3LIE5 342 aa13.29□□□□□ -0.28
SMC1A-204ENST00000463684 ABHD17CQ6PCB6 329 aa13.29□□□□□ -0.28
SMC1A-204ENST00000463684 SBSNQ6UWP8 590 aa13.29□□□□□ -0.28
SMC1A-204ENST00000463684 SLCO4C1Q6ZQN7 724 aa13.29□□□□□ -0.28
SMC1A-204ENST00000463684 TMEM139Q8IV31 216 aa13.29□□□□□ -0.28
SMC1A-204ENST00000463684 AGGF1Q8N302 714 aaeCLIP13.29□□□□□ -0.286e-8■■■□□ 14.8
SMC1A-204ENST00000463684 CIARTQ8N365 385 aaPredicted RBP13.29□□□□□ -0.28
SMC1A-204ENST00000463684 SMPDL3BQ92485 455 aa13.29□□□□□ -0.28
SMC1A-204ENST00000463684 PIGTQ969N2 578 aa13.29□□□□□ -0.28
SMC1A-204ENST00000463684 ISL2Q96A47 359 aa13.29□□□□□ -0.28
SMC1A-204ENST00000463684 SENP5Q96HI0 755 aaPredicted RBP13.29□□□□□ -0.28
SMC1A-204ENST00000463684 Q96MF0 132 aa13.29□□□□□ -0.28
SMC1A-204ENST00000463684 CAPS2Q9BXY5 557 aa13.29□□□□□ -0.28
SMC1A-204ENST00000463684 ROGDIQ9GZN7 287 aa13.29□□□□□ -0.28
SMC1A-204ENST00000463684 PITHD1Q9GZP4 211 aaPredicted RBP13.29□□□□□ -0.28
SMC1A-204ENST00000463684 NT5DC2Q9H857 520 aa13.29□□□□□ -0.28
SMC1A-204ENST00000463684 LYRM4Q9HD34 91 aa13.29□□□□□ -0.28
SMC1A-204ENST00000463684 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.29□□□□□ -0.28
SMC1A-204ENST00000463684 CD8B2A6NJW9 211 aa13.28□□□□□ -0.28
SMC1A-204ENST00000463684 ERN1O75460 977 aaKnown RBP13.28□□□□□ -0.28
SMC1A-204ENST00000463684 IL18BPO95998 194 aa13.28□□□□□ -0.28
SMC1A-204ENST00000463684 PGGT1BP53609 377 aa13.28□□□□□ -0.28
SMC1A-204ENST00000463684 CDKL1Q00532 357 aa13.28□□□□□ -0.28
SMC1A-204ENST00000463684 ID2Q02363 134 aa13.28□□□□□ -0.28
SMC1A-204ENST00000463684 PPP1R3AQ16821 1122 aa13.28□□□□□ -0.28
SMC1A-204ENST00000463684 TBCELQ5QJ74 424 aa13.28□□□□□ -0.28
SMC1A-204ENST00000463684 FAM45BPQ6NSW5 357 aa13.28□□□□□ -0.28
SMC1A-204ENST00000463684 SYDE1Q6ZW31 735 aaPredicted RBP13.28□□□□□ -0.28
SMC1A-204ENST00000463684 FAM45AQ8TCE6 357 aa13.28□□□□□ -0.28
SMC1A-204ENST00000463684 ZNF592Q92610 1267 aa13.28□□□□□ -0.28
SMC1A-204ENST00000463684 RBM18Q96H35 190 aaKnown RBP13.28□□□□□ -0.28
SMC1A-204ENST00000463684 ART5Q96L15 291 aa13.28□□□□□ -0.28
SMC1A-204ENST00000463684 ZNF597Q96LX8 424 aa13.28□□□□□ -0.28
SMC1A-204ENST00000463684 DGAT2Q96PD7 388 aa13.28□□□□□ -0.28
SMC1A-204ENST00000463684 PIP5K1AQ99755 562 aa13.28□□□□□ -0.28
SMC1A-204ENST00000463684 RBM24Q9BX46 236 aaKnown RBP13.28□□□□□ -0.28
SMC1A-204ENST00000463684 PRDM14Q9GZV8 571 aa13.28□□□□□ -0.28
SMC1A-204ENST00000463684 PROK2Q9HC23 129 aa13.28□□□□□ -0.28
SMC1A-204ENST00000463684 PRM3Q9NNZ6 103 aa13.28□□□□□ -0.28
SMC1A-204ENST00000463684 RYDENQ9NUL5 291 aaKnown RBP13.28□□□□□ -0.28
SMC1A-204ENST00000463684 JKAMPQ9P055 326 aa13.28□□□□□ -0.28
SMC1A-204ENST00000463684 CHCHD2Q9Y6H1 151 aaPredicted RBP13.28□□□□□ -0.28
SMC1A-204ENST00000463684 SH3D21A4FU49 640 aa13.27□□□□□ -0.29
SMC1A-204ENST00000463684 MBD3L4A6NDZ8 208 aaPredicted RBP13.27□□□□□ -0.29
SMC1A-204ENST00000463684 MBD3L3A6NE82 208 aaPredicted RBP13.27□□□□□ -0.29
SMC1A-204ENST00000463684 MBD3L5A6NJ08 208 aaPredicted RBP13.27□□□□□ -0.29
SMC1A-204ENST00000463684 INAFM1C9JVW0 142 aa13.27□□□□□ -0.29
SMC1A-204ENST00000463684 ACSL3O95573 720 aa13.27□□□□□ -0.29
SMC1A-204ENST00000463684 TTC4O95801 387 aa13.27□□□□□ -0.29
SMC1A-204ENST00000463684 FBXO45P0C2W1 286 aa13.27□□□□□ -0.29
SMC1A-204ENST00000463684 GDF5P43026 501 aa13.27□□□□□ -0.29
SMC1A-204ENST00000463684 KCNC1P48547 511 aa13.27□□□□□ -0.29
SMC1A-204ENST00000463684 BIKQ13323 160 aa13.27□□□□□ -0.29
SMC1A-204ENST00000463684 VASNQ6EMK4 673 aa13.27□□□□□ -0.29
SMC1A-204ENST00000463684 PRSS57Q6UWY2 283 aa13.27□□□□□ -0.29
SMC1A-204ENST00000463684 LYPD8Q6UX82 237 aa13.27□□□□□ -0.29
SMC1A-204ENST00000463684 FRA10AC1Q70Z53 315 aa13.27□□□□□ -0.29
SMC1A-204ENST00000463684 SLC29A4Q7RTT9 530 aa13.27□□□□□ -0.29
SMC1A-204ENST00000463684 GALNT7Q86SF2 657 aa13.27□□□□□ -0.29
SMC1A-204ENST00000463684 CNTN4Q8IWV2 1026 aa13.27□□□□□ -0.29
SMC1A-204ENST00000463684 C9orf40Q8IXQ3 194 aa13.27□□□□□ -0.29
SMC1A-204ENST00000463684 SRFBP1Q8NEF9 429 aaKnown RBP13.27□□□□□ -0.29
SMC1A-204ENST00000463684 OR10G3Q8NGC4 313 aa13.27□□□□□ -0.29
SMC1A-204ENST00000463684 MBD3L2Q8NHZ7 208 aaPredicted RBP13.27□□□□□ -0.29
SMC1A-204ENST00000463684 ANKRD9Q96BM1 317 aaPredicted RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms