RNA–Protein interactions for RNA: ENST00000463328.5

TRA2B-207, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 2,780 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-207ENST00000463328 HEPACAMQ14CZ8 416 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 LSM12Q3MHD2 195 aaKnown RBP5.1□□□□□ -1.59
TRA2B-207ENST00000463328 PRAMEF5Q5TYX0 476 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 PRAMEF9Q5VWM5 478 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 PRAMEF6Q5VXH4 476 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 KCTD8Q6ZWB6 473 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 CXXC5Q7LFL8 322 aaKnown RBP5.1□□□□□ -1.59
TRA2B-207ENST00000463328 GDF7Q7Z4P5 450 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 CENPVQ7Z7K6 275 aaPredicted RBP5.1□□□□□ -1.59
TRA2B-207ENST00000463328 PIGZQ86VD9 579 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 SLC26A11Q86WA9 606 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 UBE2J2Q8N2K1 259 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 RNF169Q8NCN4 708 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 STKLD1Q8NE28 680 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 CADM4Q8NFZ8 388 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 GRHL3Q8TE85 626 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 DQX1Q8TE96 717 aaKnown RBP5.1□□□□□ -1.59
TRA2B-207ENST00000463328 DLG3Q92796 817 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 LENG1Q96BZ8 264 aaPredicted RBP5.1□□□□□ -1.59
TRA2B-207ENST00000463328 ERLEC1Q96DZ1 483 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 RNFT2Q96EX2 444 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 SIGLEC10Q96LC7 697 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 TGS1Q96RS0 853 aaKnown RBP5.1□□□□□ -1.59
TRA2B-207ENST00000463328 TRIM15Q9C019 465 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 DPEP3Q9H4B8 488 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 POPDC2Q9HBU9 364 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 DMAP1Q9NPF5 467 aaPredicted RBP5.1□□□□□ -1.59
TRA2B-207ENST00000463328 RNF186Q9NXI6 227 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 CLDND1Q9NY35 253 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 SLC17A7Q9P2U7 560 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 CTNNAL1Q9UBT7 734 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 HES2Q9Y543 173 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 FNDC1Q4ZHG4 1894 aaPredicted RBP5.1□□□□□ -1.59
TRA2B-207ENST00000463328 MYADML2A6NDP7 307 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 PRAMEF25A6NGN4 478 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 C5orf52A6NGY3 159 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 FAM159BA6NKW6 160 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 ERI2A8K979 691 aaKnown RBP5.1□□□□□ -1.59
TRA2B-207ENST00000463328 PRAMEF26H0Y7S4 382 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 M0QZQ0 153 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 TERTO14746 1132 aaKnown RBP5.1□□□□□ -1.59
TRA2B-207ENST00000463328 GSTA4O15217 222 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 MAGEC1O60732 1142 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 PRAMEF4O60810 478 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 PRAMEF11O60813 436 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 EDF1O60869 148 aaKnown RBP5.1□□□□□ -1.59
TRA2B-207ENST00000463328 AVILO75366 819 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 IFNA6P05013 189 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 HNF1AP20823 631 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 DDX6P26196 483 aaKnown RBP eCLIP5.1□□□□□ -1.59
TRA2B-207ENST00000463328 APOBEC3AP31941 199 aaPredicted RBP5.1□□□□□ -1.59
TRA2B-207ENST00000463328 NAA10P41227 235 aaPredicted RBP5.1□□□□□ -1.59
TRA2B-207ENST00000463328 ELK3P41970 407 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 FHITP49789 147 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 STK19P49842 368 aaPredicted RBP5.1□□□□□ -1.59
TRA2B-207ENST00000463328 FAM3BP58499 235 aaPredicted RBP5.1□□□□□ -1.59
TRA2B-207ENST00000463328 RAB11AP62491 216 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 RPS15P62841 145 aaKnown RBP5.1□□□□□ -1.59
TRA2B-207ENST00000463328 CSNK1G2P78368 415 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 SIM1P81133 766 aaPredicted RBP5.1□□□□□ -1.59
TRA2B-207ENST00000463328 SHC2P98077 582 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 TLE1Q04724 770 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 SLC10A2Q12908 348 aaPredicted RBP5.1□□□□□ -1.59
TRA2B-207ENST00000463328 EIF4EBP2Q13542 120 aaPredicted RBP5.1□□□□□ -1.59
TRA2B-207ENST00000463328 PCOLCEQ15113 449 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 RAB11BQ15907 218 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 KCTD19Q17RG1 926 aaPredicted RBP5.1□□□□□ -1.59
TRA2B-207ENST00000463328 NCBP2-AS2Q69YL0 99 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 GRAMD4Q6IC98 578 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 LRRC8BQ6P9F7 803 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 TSSK4Q6SA08 328 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 PAQR3Q6TCH7 311 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 KIAA1324Q6UXG2 1013 aaKnown RBP5.1□□□□□ -1.59
TRA2B-207ENST00000463328 LRRC74BQ6ZQY2 392 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 CLEC20AQ6ZU45 233 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 ESPNLQ6ZVH7 1005 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 GPRIN1Q7Z2K8 1008 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 UBE3DQ7Z6J8 389 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 ABI1Q8IZP0 508 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 THEM5Q8N1Q8 247 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 TMEM130Q8N3G9 435 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 OR2L3Q8NG85 312 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 OR5D18Q8NGL1 313 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 OR52N1Q8NH53 320 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 DNAJB14Q8TBM8 379 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 TBC1D15Q8TC07 691 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 TFB1MQ8WVM0 346 aaKnown RBP5.1□□□□□ -1.59
TRA2B-207ENST00000463328 RFT1Q96AA3 541 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 DGCR14Q96DF8 476 aaKnown RBP5.1□□□□□ -1.59
TRA2B-207ENST00000463328 SENP8Q96LD8 212 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 EBNA1BP2Q99848 306 aaKnown RBP5.1□□□□□ -1.59
TRA2B-207ENST00000463328 PITPNM3Q9BZ71 974 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 SLC6A16Q9GZN6 736 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 SIRPDQ9H106 197 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 HRH4Q9H3N8 390 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 FAM49BQ9NUQ9 324 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 APOBEC3BQ9UH17 382 aaKnown RBP5.1□□□□□ -1.59
TRA2B-207ENST00000463328 ERRFI1Q9UJM3 462 aaPredicted RBP5.1□□□□□ -1.59
TRA2B-207ENST00000463328 FBXW11Q9UKB1 542 aa5.1□□□□□ -1.59
TRA2B-207ENST00000463328 PADI3Q9ULW8 664 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms