RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 MFSD4BQ5TF39 518 aa17.56■□□□□ 0.4
HPS3-204ENST00000462030 SAXO2Q658L1 398 aa17.56■□□□□ 0.4
HPS3-204ENST00000462030 XKRXQ6PP77 449 aa17.56■□□□□ 0.4
HPS3-204ENST00000462030 CASP12Q6UXS9 341 aa17.56■□□□□ 0.4
HPS3-204ENST00000462030 MSLNLQ96KJ4 702 aa17.56■□□□□ 0.4
HPS3-204ENST00000462030 NELL2Q99435 816 aa17.56■□□□□ 0.4
HPS3-204ENST00000462030 SPNS1Q9H2V7 528 aa17.56■□□□□ 0.4
HPS3-204ENST00000462030 FAM83DQ9H4H8 585 aa17.56■□□□□ 0.4
HPS3-204ENST00000462030 RNF121Q9H920 327 aa17.56■□□□□ 0.4
HPS3-204ENST00000462030 DMRT3Q9NQL9 472 aa17.56■□□□□ 0.4
HPS3-204ENST00000462030 TMCC3Q9ULS5 477 aa17.56■□□□□ 0.4
HPS3-204ENST00000462030 RPL36Q9Y3U8 105 aaKnown RBP17.56■□□□□ 0.4
HPS3-204ENST00000462030 THSD7BQ9C0I4 1608 aa17.55■□□□□ 0.4
HPS3-204ENST00000462030 PLA2G10O15496 165 aa17.55■□□□□ 0.4
HPS3-204ENST00000462030 BCHEP06276 602 aa17.55■□□□□ 0.4
HPS3-204ENST00000462030 KLK1P06870 262 aa17.55■□□□□ 0.4
HPS3-204ENST00000462030 PBLDP30039 288 aaPredicted RBP17.55■□□□□ 0.4
HPS3-204ENST00000462030 GPC1P35052 558 aa17.55■□□□□ 0.4
HPS3-204ENST00000462030 ETV3P41162 512 aa17.55■□□□□ 0.4
HPS3-204ENST00000462030 TBPL1P62380 186 aa17.55■□□□□ 0.4
HPS3-204ENST00000462030 TNFAIP8L2Q6P589 184 aaPredicted RBP17.55■□□□□ 0.4
HPS3-204ENST00000462030 KLHDC8AQ8IYD2 350 aa17.55■□□□□ 0.4
HPS3-204ENST00000462030 FIBINQ8TAL6 211 aa17.55■□□□□ 0.4
HPS3-204ENST00000462030 FRMD6Q96NE9 622 aa17.55■□□□□ 0.4
HPS3-204ENST00000462030 WFDC6Q9BQY6 131 aa17.55■□□□□ 0.4
HPS3-204ENST00000462030 SORBS1Q9BX66 1292 aaKnown RBP17.55■□□□□ 0.4
HPS3-204ENST00000462030 CXorf36Q9H7Y0 433 aa17.55■□□□□ 0.4
HPS3-204ENST00000462030 GULP1Q9UBP9 304 aa17.55■□□□□ 0.4
HPS3-204ENST00000462030 ERVH48-1M5A8F1 160 aa17.55■□□□□ 0.4
HPS3-204ENST00000462030 ALPPP05187 535 aa17.55■□□□□ 0.4
HPS3-204ENST00000462030 IL3P08700 152 aa17.55■□□□□ 0.4
HPS3-204ENST00000462030 DCST1Q5T197 706 aa17.55■□□□□ 0.4
HPS3-204ENST00000462030 REEP3Q6NUK4 255 aa17.55■□□□□ 0.4
HPS3-204ENST00000462030 TCTN3Q6NUS6 607 aa17.55■□□□□ 0.4
HPS3-204ENST00000462030 PAMR1Q6UXH9 720 aa17.55■□□□□ 0.4
HPS3-204ENST00000462030 USP30Q70CQ3 517 aa17.55■□□□□ 0.4
HPS3-204ENST00000462030 METTL3Q86U44 580 aaKnown RBP17.55■□□□□ 0.4
HPS3-204ENST00000462030 CMTM8Q8IZV2 173 aa17.55■□□□□ 0.4
HPS3-204ENST00000462030 SYT14Q8NB59 555 aa17.55■□□□□ 0.4
HPS3-204ENST00000462030 JPH3Q8WXH2 748 aaPredicted RBP17.55■□□□□ 0.4
HPS3-204ENST00000462030 REPS1Q96D71 796 aa17.55■□□□□ 0.4
HPS3-204ENST00000462030 SLC6A16Q9GZN6 736 aa17.55■□□□□ 0.4
HPS3-204ENST00000462030 MCOLN1Q9GZU1 580 aa17.55■□□□□ 0.4
HPS3-204ENST00000462030 RACGAP1Q9H0H5 632 aa17.55■□□□□ 0.4
HPS3-204ENST00000462030 RPRD1BQ9NQG5 326 aaKnown RBP17.55■□□□□ 0.4
HPS3-204ENST00000462030 TVP23BQ9NYZ1 205 aa17.55■□□□□ 0.4
HPS3-204ENST00000462030 CFAP97Q9P2B7 532 aa17.55■□□□□ 0.4
HPS3-204ENST00000462030 PRRG1O14668 218 aa17.54■□□□□ 0.4
HPS3-204ENST00000462030 IL1AP01583 271 aa17.54■□□□□ 0.4
HPS3-204ENST00000462030 SRPRAP08240 638 aaKnown RBP17.54■□□□□ 0.4
HPS3-204ENST00000462030 TSPAN19P0C672 248 aa17.54■□□□□ 0.4
HPS3-204ENST00000462030 ATN1P54259 1190 aaPredicted RBP17.54■□□□□ 0.4
HPS3-204ENST00000462030 CAP1Q01518 475 aa17.54■□□□□ 0.4
HPS3-204ENST00000462030 C1DQ13901 141 aaKnown RBP17.54■□□□□ 0.4
HPS3-204ENST00000462030 E2F2Q14209 437 aa17.54■□□□□ 0.4
HPS3-204ENST00000462030 HEPACAMQ14CZ8 416 aa17.54■□□□□ 0.4
HPS3-204ENST00000462030 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.54■□□□□ 0.4
HPS3-204ENST00000462030 PYDC2Q56P42 97 aa17.54■□□□□ 0.4
HPS3-204ENST00000462030 FAM209AQ5JX71 171 aa17.54■□□□□ 0.4
HPS3-204ENST00000462030 DEF8Q6ZN54 512 aa17.54■□□□□ 0.4
HPS3-204ENST00000462030 Q6ZVU0 165 aa17.54■□□□□ 0.4
HPS3-204ENST00000462030 GLCCI1Q86VQ1 547 aa17.54■□□□□ 0.4
HPS3-204ENST00000462030 CADM2Q8N3J6 435 aa17.54■□□□□ 0.4
HPS3-204ENST00000462030 HORMAD2Q8N7B1 307 aa17.54■□□□□ 0.4
HPS3-204ENST00000462030 OR4D11Q8NGI4 311 aa17.54■□□□□ 0.4
HPS3-204ENST00000462030 ZNF480Q8WV37 535 aa17.54■□□□□ 0.4
HPS3-204ENST00000462030 RIPOR3Q96MK2 946 aa17.54■□□□□ 0.4
HPS3-204ENST00000462030 RIOK2Q9BVS4 552 aaKnown RBP17.54■□□□□ 0.4
HPS3-204ENST00000462030 POLR2J3Q9H1A7 115 aaKnown RBP17.54■□□□□ 0.4
HPS3-204ENST00000462030 MYNNQ9NPC7 610 aa17.54■□□□□ 0.4
HPS3-204ENST00000462030 MGAT4BQ9UQ53 548 aa17.54■□□□□ 0.4
HPS3-204ENST00000462030 CARD8Q9Y2G2 431 aa17.54■□□□□ 0.4
HPS3-204ENST00000462030 PRKYO43930 277 aa17.54■□□□□ 0.4
HPS3-204ENST00000462030 EFEMP2O95967 443 aa17.54■□□□□ 0.4
HPS3-204ENST00000462030 TNNI3P19429 210 aa17.54■□□□□ 0.4
HPS3-204ENST00000462030 HLA-FP30511 346 aa17.54■□□□□ 0.4
HPS3-204ENST00000462030 SDC2P34741 201 aa17.54■□□□□ 0.4
HPS3-204ENST00000462030 ETV5P41161 510 aa17.54■□□□□ 0.4
HPS3-204ENST00000462030 MLLT3P42568 568 aaPredicted RBP17.54■□□□□ 0.4
HPS3-204ENST00000462030 ETV1P50549 477 aa17.54■□□□□ 0.4
HPS3-204ENST00000462030 GNG2P59768 71 aa17.54■□□□□ 0.4
HPS3-204ENST00000462030 ATAT1Q5SQI0 421 aa17.54■□□□□ 0.4
HPS3-204ENST00000462030 PGBD2Q6P3X8 592 aa17.54■□□□□ 0.4
HPS3-204ENST00000462030 LYPD8Q6UX82 237 aa17.54■□□□□ 0.4
HPS3-204ENST00000462030 ABI3BPQ7Z7G0 1075 aa17.54■□□□□ 0.4
HPS3-204ENST00000462030 RNF180Q86T96 592 aa17.54■□□□□ 0.4
HPS3-204ENST00000462030 RASGEF1AQ8N9B8 481 aa17.54■□□□□ 0.4
HPS3-204ENST00000462030 OR52I1Q8NGK6 324 aa17.54■□□□□ 0.4
HPS3-204ENST00000462030 OR8J1Q8NGP2 316 aa17.54■□□□□ 0.4
HPS3-204ENST00000462030 SLC38A5Q8WUX1 472 aa17.54■□□□□ 0.4
HPS3-204ENST00000462030 GPBP1L1Q9HC44 474 aaPredicted RBP17.54■□□□□ 0.4
HPS3-204ENST00000462030 ACOXLQ9NUZ1 547 aa17.54■□□□□ 0.4
HPS3-204ENST00000462030 TAAR2Q9P1P5 351 aa17.54■□□□□ 0.4
HPS3-204ENST00000462030 LSM7Q9UK45 103 aaKnown RBP17.54■□□□□ 0.4
HPS3-204ENST00000462030 PLXNA2O75051 1894 aa17.53■□□□□ 0.4
HPS3-204ENST00000462030 PIPSLA2A3N6 862 aa17.53■□□□□ 0.4
HPS3-204ENST00000462030 OR6C70A6NIJ9 312 aa17.53■□□□□ 0.4
HPS3-204ENST00000462030 POLR1CO15160 346 aaPredicted RBP17.53■□□□□ 0.4
HPS3-204ENST00000462030 TLX2O43763 284 aaPredicted RBP17.53■□□□□ 0.4
HPS3-204ENST00000462030 APOL3O95236 402 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms