RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 SMIM10L1P0DMW3 83 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 GLI4P10075 376 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 NCF1P14598 390 aaPredicted RBP4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 CCND1P24385 295 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 EEF1DP29692 281 aaKnown RBP4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 ITGA8P53708 1063 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 MLF1P58340 268 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 SLC26A5P58743 744 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 KRTAP10-9P60411 292 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 BTN3A2P78410 334 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 IRF9Q00978 393 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 RGS1Q08116 209 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 ART3Q13508 389 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 RUNX2Q13950 521 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 FASTKD3Q14CZ7 662 aaKnown RBP4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 HERC3Q15034 1050 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 INAQ16352 499 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 EXT1Q16394 746 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 ZNF630Q2M218 657 aaPredicted RBP4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 TOR1AIP1Q5JTV8 583 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 MROH9Q5TGP6 573 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 ARMC3Q5W041 872 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 STEAP3Q658P3 488 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 SLC25A25Q6KCM7 469 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 SBSNQ6UWP8 590 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 C16orf47Q6ZP98 133 aaPredicted RBP4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 PCGF5Q86SE9 256 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 TMPRSS11BQ86T26 416 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 THOC6Q86W42 341 aaKnown RBP4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 DOLPP1Q86YN1 238 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 CEP97Q8IW35 865 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 CNTN4Q8IWV2 1026 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 SLC5A8Q8N695 610 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 NFAM1Q8NET5 270 aaPredicted RBP4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 ELP5Q8TE02 316 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 CREB3L4Q8TEY5 395 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 GRK7Q8WTQ7 553 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 ANKRD49Q8WVL7 239 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 SLC5A11Q8WWX8 675 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 CCT6BQ92526 530 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 FBXL8Q96CD0 374 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 SCMH1Q96GD3 660 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 SMIM10Q96HG1 83 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 GPR137Q96N19 417 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 NAP1L3Q99457 506 aaPredicted RBP4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 TRIM51Q9BSJ1 452 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 HAUS8Q9BT25 410 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 TRIM54Q9BYV2 358 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 TRIM31Q9BZY9 425 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 MS4A5Q9H3V2 200 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 IFT22Q9H7X7 185 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 PNO1Q9NRX1 252 aaKnown RBP4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 ZFP69BQ9UJL9 534 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 SNX12Q9UMY4 172 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 TEX264Q9Y6I9 313 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 ARHGAP21Q5T5U3 1957 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 AKAP6Q13023 2319 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 PCNX3Q9H6A9 2034 aa4.38□□□□□ -1.71
GTF3C3-208ENST00000455546 PRRC2AP48634 2157 aaKnown RBP4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 CRYBG3Q68DQ2 2970 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 TRBV11-1A0A0K0K1C0 115 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 GOLGA6L10A0A0M3HER8 536 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 A0A1B0GTH9 108 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 ASPDHA6ND91 283 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 GSTA4O15217 222 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 TP73O15350 636 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 TAPBPO15533 448 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 HS6ST1O60243 411 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 PRKNO60260 465 aaPredicted RBP4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 CDC40O60508 579 aaKnown RBP eCLIP4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 PRAMEF4O60810 478 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 H2AFYO75367 372 aaKnown RBP4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 SH3BGRLO75368 114 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 SLC25A12O75746 678 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 MYO1DO94832 1006 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 WDR47O94967 919 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 TTC4O95801 387 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 COX6B1P14854 86 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 ABOP16442 354 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 PPP2R1BP30154 601 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 PTGER1P34995 402 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 FNTAP49354 379 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 CYB561P49447 251 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 HNRNPFP52597 415 aaKnown RBP4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 CASP6P55212 293 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 AP1S2P56377 157 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 TAS2R39P59534 338 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 TAS2R50P59544 299 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 AP2B1P63010 937 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 REEP5Q00765 189 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 RBPJQ06330 500 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 PDIA2Q13087 525 aaKnown RBP4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 SP140Q13342 867 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 TSNQ15631 228 aaKnown RBP4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 ZNF750Q32MQ0 723 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 KRTCAP3Q53RY4 240 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 XKR6Q5GH73 641 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 PRAMEF9Q5VWM5 478 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 ADNP2Q6IQ32 1131 aa4.37□□□□□ -1.71
GTF3C3-208ENST00000455546 LRRC8EQ6NSJ5 796 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms