RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 PI15O43692 258 aa10.66□□□□□ -0.7
DDR1-240ENST00000454612 CAPNS1P04632 268 aa10.66□□□□□ -0.7
DDR1-240ENST00000454612 WDR5P61964 334 aaKnown RBP10.66□□□□□ -0.7
DDR1-240ENST00000454612 PCDH1Q08174 1060 aa10.66□□□□□ -0.7
DDR1-240ENST00000454612 GRIK2Q13002 908 aa10.66□□□□□ -0.7
DDR1-240ENST00000454612 AQP6Q13520 282 aa10.66□□□□□ -0.7
DDR1-240ENST00000454612 LRRC32Q14392 662 aa10.66□□□□□ -0.7
DDR1-240ENST00000454612 LUZP2Q86TE4 346 aa10.66□□□□□ -0.7
DDR1-240ENST00000454612 DPP10Q8N608 796 aa10.66□□□□□ -0.7
DDR1-240ENST00000454612 TOR1AIP2Q8NFQ8 470 aa10.66□□□□□ -0.7
DDR1-240ENST00000454612 EFHD2Q96C19 240 aaPredicted RBP10.66□□□□□ -0.7
DDR1-240ENST00000454612 RSPH9Q9H1X1 276 aaPredicted RBP10.66□□□□□ -0.7
DDR1-240ENST00000454612 MIA3Q5JRA6 1907 aa10.66□□□□□ -0.7
DDR1-240ENST00000454612 SCAMP2O15127 329 aaKnown RBP10.66□□□□□ -0.7
DDR1-240ENST00000454612 PCDHGA12O60330 932 aa10.66□□□□□ -0.7
DDR1-240ENST00000454612 PRAMEF4O60810 478 aa10.66□□□□□ -0.7
DDR1-240ENST00000454612 CCNYL3P0C7X3 344 aa10.66□□□□□ -0.7
DDR1-240ENST00000454612 C1GALT1C1LP0DN25 315 aa10.66□□□□□ -0.7
DDR1-240ENST00000454612 ITGA2P17301 1181 aa10.66□□□□□ -0.7
DDR1-240ENST00000454612 TGM4P49221 684 aa10.66□□□□□ -0.7
DDR1-240ENST00000454612 XKP51811 444 aa10.66□□□□□ -0.7
DDR1-240ENST00000454612 CSNK2BP67870 215 aa10.66□□□□□ -0.7
DDR1-240ENST00000454612 ADARB1P78563 741 aaKnown RBP10.66□□□□□ -0.7
DDR1-240ENST00000454612 IQCCQ4KMZ1 466 aa10.66□□□□□ -0.7
DDR1-240ENST00000454612 PRAMEF9Q5VWM5 478 aa10.66□□□□□ -0.7
DDR1-240ENST00000454612 CADM3Q8N126 398 aa10.66□□□□□ -0.7
DDR1-240ENST00000454612 UXS1Q8NBZ7 420 aa10.66□□□□□ -0.7
DDR1-240ENST00000454612 C19orf18Q8NEA5 215 aa10.66□□□□□ -0.7
DDR1-240ENST00000454612 TOX2Q96NM4 488 aa10.66□□□□□ -0.7
DDR1-240ENST00000454612 CCDC3Q9BQI4 270 aa10.66□□□□□ -0.7
DDR1-240ENST00000454612 CRISPLD2Q9H0B8 497 aa10.66□□□□□ -0.7
DDR1-240ENST00000454612 FAM120CQ9NX05 1096 aaKnown RBP10.66□□□□□ -0.7
DDR1-240ENST00000454612 NKIRAS2Q9NYR9 191 aa10.66□□□□□ -0.7
DDR1-240ENST00000454612 TAS2R9Q9NYW1 312 aa10.66□□□□□ -0.7
DDR1-240ENST00000454612 MKLN1Q9UL63 735 aa10.66□□□□□ -0.7
DDR1-240ENST00000454612 SH2B3Q9UQQ2 575 aa10.66□□□□□ -0.7
DDR1-240ENST00000454612 UGT2A1Q9Y4X1 527 aa10.66□□□□□ -0.7
DDR1-240ENST00000454612 C1QTNF3-AMACRE9PGA6 284 aa10.65□□□□□ -0.7
DDR1-240ENST00000454612 ANHXE9PGG2 379 aa10.65□□□□□ -0.7
DDR1-240ENST00000454612 CASKO14936 926 aa10.65□□□□□ -0.7
DDR1-240ENST00000454612 ZW10O43264 779 aa10.65□□□□□ -0.7
DDR1-240ENST00000454612 PRMT3O60678 531 aa10.65□□□□□ -0.7
DDR1-240ENST00000454612 IDUAP35475 653 aa10.65□□□□□ -0.7
DDR1-240ENST00000454612 KCNC4Q03721 635 aa10.65□□□□□ -0.7
DDR1-240ENST00000454612 ADPRMQ3LIE5 342 aa10.65□□□□□ -0.7
DDR1-240ENST00000454612 ZNF385BQ569K4 471 aa10.65□□□□□ -0.7
DDR1-240ENST00000454612 ANKRD33Q7Z3H0 272 aa10.65□□□□□ -0.7
DDR1-240ENST00000454612 ADGRD2Q7Z7M1 963 aa10.65□□□□□ -0.7
DDR1-240ENST00000454612 GPR149Q86SP6 731 aa10.65□□□□□ -0.7
DDR1-240ENST00000454612 PLA2G15Q8NCC3 412 aa10.65□□□□□ -0.7
DDR1-240ENST00000454612 C16orf78Q8WTQ4 265 aa10.65□□□□□ -0.7
DDR1-240ENST00000454612 CHPT1Q8WUD6 406 aa10.65□□□□□ -0.7
DDR1-240ENST00000454612 USP7Q93009 1102 aa10.65□□□□□ -0.7
DDR1-240ENST00000454612 PPP1R16AQ96I34 528 aa10.65□□□□□ -0.7
DDR1-240ENST00000454612 RC3H2Q9HBD1 1191 aaKnown RBP10.65□□□□□ -0.7
DDR1-240ENST00000454612 IL21Q9HBE4 155 aa10.65□□□□□ -0.7
DDR1-240ENST00000454612 IL1RAPQ9NPH3 570 aa10.65□□□□□ -0.7
DDR1-240ENST00000454612 PTGFRNQ9P2B2 879 aa10.65□□□□□ -0.7
DDR1-240ENST00000454612 SESN1Q9Y6P5 492 aa10.65□□□□□ -0.7
DDR1-240ENST00000454612 GFRA2O00451 464 aa10.65□□□□□ -0.7
DDR1-240ENST00000454612 SLC9A3R1O14745 358 aaPredicted RBP10.65□□□□□ -0.7
DDR1-240ENST00000454612 AREL1O15033 823 aa10.65□□□□□ -0.7
DDR1-240ENST00000454612 MID1O15344 667 aa10.65□□□□□ -0.7
DDR1-240ENST00000454612 PLOD3O60568 738 aa10.65□□□□□ -0.7
DDR1-240ENST00000454612 ABLIM3O94929 683 aa10.65□□□□□ -0.7
DDR1-240ENST00000454612 SOX30O94993 753 aa10.65□□□□□ -0.7
DDR1-240ENST00000454612 CD22P20273 847 aa10.65□□□□□ -0.7
DDR1-240ENST00000454612 RGS8P57771 180 aaPredicted RBP10.65□□□□□ -0.7
DDR1-240ENST00000454612 E2F2Q14209 437 aa10.65□□□□□ -0.7
DDR1-240ENST00000454612 SYPL1Q16563 259 aa10.65□□□□□ -0.7
DDR1-240ENST00000454612 DUSP7Q16829 419 aa10.65□□□□□ -0.7
DDR1-240ENST00000454612 COQ5Q5HYK3 327 aa10.65□□□□□ -0.7
DDR1-240ENST00000454612 KHDRBS2Q5VWX1 349 aaKnown RBP10.65□□□□□ -0.7
DDR1-240ENST00000454612 HSDL2Q6YN16 418 aa10.65□□□□□ -0.7
DDR1-240ENST00000454612 C6orf120Q7Z4R8 191 aa10.65□□□□□ -0.7
DDR1-240ENST00000454612 TMEM150AQ86TG1 271 aa10.65□□□□□ -0.7
DDR1-240ENST00000454612 SPERTQ8NA61 448 aa10.65□□□□□ -0.7
DDR1-240ENST00000454612 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.65□□□□□ -0.75e-39■■■■■ 49.2
DDR1-240ENST00000454612 ADAMTS15Q8TE58 950 aa10.65□□□□□ -0.7
DDR1-240ENST00000454612 RASSF5Q8WWW0 418 aa10.65□□□□□ -0.7
DDR1-240ENST00000454612 TANKQ92844 425 aa10.65□□□□□ -0.7
DDR1-240ENST00000454612 NXPE3Q969Y0 559 aa10.65□□□□□ -0.7
DDR1-240ENST00000454612 CXorf40BQ96DE9 158 aa10.65□□□□□ -0.7
DDR1-240ENST00000454612 TMEM19Q96HH6 336 aa10.65□□□□□ -0.7
DDR1-240ENST00000454612 MBOAT4Q96T53 435 aa10.65□□□□□ -0.7
DDR1-240ENST00000454612 TMED9Q9BVK6 235 aa10.65□□□□□ -0.7
DDR1-240ENST00000454612 SIRT5Q9NXA8 310 aa10.65□□□□□ -0.7
DDR1-240ENST00000454612 B3GALNT1O75752 331 aa10.65□□□□□ -0.7
DDR1-240ENST00000454612 WISP3O95389 354 aaPredicted RBP10.65□□□□□ -0.7
DDR1-240ENST00000454612 NPPAP01160 153 aa10.65□□□□□ -0.7
DDR1-240ENST00000454612 ACADMP11310 421 aa10.65□□□□□ -0.7
DDR1-240ENST00000454612 CD72P21854 359 aa10.65□□□□□ -0.7
DDR1-240ENST00000454612 PAICSP22234 425 aaKnown RBP10.65□□□□□ -0.7
DDR1-240ENST00000454612 CBLP22681 906 aa10.65□□□□□ -0.7
DDR1-240ENST00000454612 GSTM2P28161 218 aa10.65□□□□□ -0.7
DDR1-240ENST00000454612 GDI1P31150 447 aa10.65□□□□□ -0.7
DDR1-240ENST00000454612 ACTR1BP42025 376 aa10.65□□□□□ -0.7
DDR1-240ENST00000454612 PNLIPRP1P54315 467 aa10.65□□□□□ -0.7
DDR1-240ENST00000454612 ACTR1AP61163 376 aa10.65□□□□□ -0.7
DDR1-240ENST00000454612 BTN3A2P78410 334 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms