RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 HAS2Q92819 552 aa13.22□□□□□ -0.29
HDAC4-205ENST00000454542 TLCD1Q96CP7 247 aa13.22□□□□□ -0.29
HDAC4-205ENST00000454542 VMP1Q96GC9 406 aa13.22□□□□□ -0.29
HDAC4-205ENST00000454542 APIPQ96GX9 242 aa13.22□□□□□ -0.29
HDAC4-205ENST00000454542 FCRL1Q96LA6 429 aa13.22□□□□□ -0.29
HDAC4-205ENST00000454542 ZNF354BQ96LW1 612 aa13.22□□□□□ -0.29
HDAC4-205ENST00000454542 PELOQ9BRX2 385 aaKnown RBP13.22□□□□□ -0.29
HDAC4-205ENST00000454542 ALOXE3Q9BYJ1 711 aa13.22□□□□□ -0.29
HDAC4-205ENST00000454542 KCNK13Q9HB14 408 aa13.22□□□□□ -0.29
HDAC4-205ENST00000454542 PNO1Q9NRX1 252 aaKnown RBP13.22□□□□□ -0.29
HDAC4-205ENST00000454542 CES1P1Q9UKY3 287 aa13.22□□□□□ -0.29
HDAC4-205ENST00000454542 PCDHA9Q9Y5H5 950 aa13.22□□□□□ -0.29
HDAC4-205ENST00000454542 AZIN1O14977 448 aa13.21□□□□□ -0.29
HDAC4-205ENST00000454542 MAN1A2O60476 641 aa13.21□□□□□ -0.29
HDAC4-205ENST00000454542 ZWINTO95229 277 aa13.21□□□□□ -0.29
HDAC4-205ENST00000454542 GPR75O95800 540 aa13.21□□□□□ -0.29
HDAC4-205ENST00000454542 IGKV3-11P04433 115 aa13.21□□□□□ -0.29
HDAC4-205ENST00000454542 FGF4P08620 206 aa13.21□□□□□ -0.29
HDAC4-205ENST00000454542 H2AFXP16104 143 aaPredicted RBP13.21□□□□□ -0.29
HDAC4-205ENST00000454542 GALNSP34059 522 aa13.21□□□□□ -0.29
HDAC4-205ENST00000454542 TNFSF10P50591 281 aa13.21□□□□□ -0.29
HDAC4-205ENST00000454542 MAPK12P53778 367 aa13.21□□□□□ -0.29
HDAC4-205ENST00000454542 TAS2R50P59544 299 aa13.21□□□□□ -0.29
HDAC4-205ENST00000454542 ID2Q02363 134 aa13.21□□□□□ -0.29
HDAC4-205ENST00000454542 TLE1Q04724 770 aa13.21□□□□□ -0.29
HDAC4-205ENST00000454542 MEP1AQ16819 746 aa13.21□□□□□ -0.29
HDAC4-205ENST00000454542 ACER2Q5QJU3 275 aa13.21□□□□□ -0.29
HDAC4-205ENST00000454542 CCNYL2Q5T2Q4 361 aa13.21□□□□□ -0.29
HDAC4-205ENST00000454542 ABHD17BQ5VST6 288 aa13.21□□□□□ -0.29
HDAC4-205ENST00000454542 CES4AQ5XG92 561 aa13.21□□□□□ -0.29
HDAC4-205ENST00000454542 CLEC6AQ6EIG7 209 aa13.21□□□□□ -0.29
HDAC4-205ENST00000454542 HOMEZQ8IX15 550 aa13.21□□□□□ -0.29
HDAC4-205ENST00000454542 ST13P4Q8IZP2 240 aaPredicted RBP13.21□□□□□ -0.29
HDAC4-205ENST00000454542 SLC5A8Q8N695 610 aa13.21□□□□□ -0.29
HDAC4-205ENST00000454542 MORN4Q8NDC4 146 aa13.21□□□□□ -0.29
HDAC4-205ENST00000454542 SLC2A12Q8TD20 617 aa13.21□□□□□ -0.29
HDAC4-205ENST00000454542 DAZLQ92904 295 aaKnown RBP13.21□□□□□ -0.29
HDAC4-205ENST00000454542 UCN3Q969E3 161 aa13.21□□□□□ -0.29
HDAC4-205ENST00000454542 NCLNQ969V3 563 aa13.21□□□□□ -0.29
HDAC4-205ENST00000454542 TM4SF18Q96CE8 201 aa13.21□□□□□ -0.29
HDAC4-205ENST00000454542 METTL2AQ96IZ6 378 aaKnown RBP13.21□□□□□ -0.29
HDAC4-205ENST00000454542 PKNOX2Q96KN3 472 aa13.21□□□□□ -0.29
HDAC4-205ENST00000454542 MFRPQ9BY79 579 aa13.21□□□□□ -0.29
HDAC4-205ENST00000454542 STMN4Q9H169 189 aaPredicted RBP13.21□□□□□ -0.29
HDAC4-205ENST00000454542 WDR41Q9HAD4 459 aa13.21□□□□□ -0.29
HDAC4-205ENST00000454542 TMBIM4Q9HC24 238 aa13.21□□□□□ -0.29
HDAC4-205ENST00000454542 TEKT2Q9UIF3 430 aa13.21□□□□□ -0.29
HDAC4-205ENST00000454542 SHANK1Q9Y566 2161 aa13.21□□□□□ -0.3
HDAC4-205ENST00000454542 TRBV11-1A0A0K0K1C0 115 aa13.2□□□□□ -0.3
HDAC4-205ENST00000454542 ARHGAP10A1A4S6 786 aa13.2□□□□□ -0.3
HDAC4-205ENST00000454542 C1orf226A1L170 272 aa13.2□□□□□ -0.3
HDAC4-205ENST00000454542 OR5H15A6NDH6 313 aa13.2□□□□□ -0.3
HDAC4-205ENST00000454542 A8MUA0 341 aa13.2□□□□□ -0.3
HDAC4-205ENST00000454542 C17orf105B2RV13 164 aa13.2□□□□□ -0.3
HDAC4-205ENST00000454542 PGRMC2O15173 223 aa13.2□□□□□ -0.3
HDAC4-205ENST00000454542 BIRC5O15392 142 aa13.2□□□□□ -0.3
HDAC4-205ENST00000454542 PCDH7O60245 1069 aa13.2□□□□□ -0.3
HDAC4-205ENST00000454542 GUCY1B2O75343 617 aa13.2□□□□□ -0.3
HDAC4-205ENST00000454542 WDPCPO95876 746 aa13.2□□□□□ -0.3
HDAC4-205ENST00000454542 MYZAPP0CAP1 466 aa13.2□□□□□ -0.3
HDAC4-205ENST00000454542 ALOX15P16050 662 aaPredicted RBP13.2□□□□□ -0.3
HDAC4-205ENST00000454542 SERPINB3P29508 390 aa13.2□□□□□ -0.3
HDAC4-205ENST00000454542 GSTM5P46439 218 aa13.2□□□□□ -0.3
HDAC4-205ENST00000454542 CLCN2P51788 898 aa13.2□□□□□ -0.3
HDAC4-205ENST00000454542 SLC18A1P54219 525 aa13.2□□□□□ -0.3
HDAC4-205ENST00000454542 MLF1P58340 268 aa13.2□□□□□ -0.3
HDAC4-205ENST00000454542 ACSM2AQ08AH3 577 aa13.2□□□□□ -0.3
HDAC4-205ENST00000454542 ZNF169Q14929 603 aaPredicted RBP13.2□□□□□ -0.3
HDAC4-205ENST00000454542 TLR1Q15399 786 aa13.2□□□□□ -0.3
HDAC4-205ENST00000454542 UGT3A2Q3SY77 523 aa13.2□□□□□ -0.3
HDAC4-205ENST00000454542 PLEKHN1Q494U1 663 aaPredicted RBP13.2□□□□□ -0.3
HDAC4-205ENST00000454542 ARL13AQ5H913 290 aaPredicted RBP13.2□□□□□ -0.3
HDAC4-205ENST00000454542 ACSM2BQ68CK6 577 aa13.2□□□□□ -0.3
HDAC4-205ENST00000454542 SLC48A1Q6P1K1 146 aa13.2□□□□□ -0.3
HDAC4-205ENST00000454542 SCIMPQ6UWF3 145 aa13.2□□□□□ -0.3
HDAC4-205ENST00000454542 DGAT2L6Q6ZPD8 337 aa13.2□□□□□ -0.3
HDAC4-205ENST00000454542 OR4N5Q8IXE1 308 aa13.2□□□□□ -0.3
HDAC4-205ENST00000454542 BEST3Q8N1M1 668 aa13.2□□□□□ -0.3
HDAC4-205ENST00000454542 OR1N1Q8NGS0 311 aa13.2□□□□□ -0.3
HDAC4-205ENST00000454542 OR8K3Q8NH51 312 aa13.2□□□□□ -0.3
HDAC4-205ENST00000454542 FAM76AQ8TAV0 307 aa13.2□□□□□ -0.3
HDAC4-205ENST00000454542 ZNF721Q8TF20 911 aa13.2□□□□□ -0.3
HDAC4-205ENST00000454542 MIB2Q96AX9 1013 aa13.2□□□□□ -0.3
HDAC4-205ENST00000454542 FBXL20Q96IG2 436 aa13.2□□□□□ -0.3
HDAC4-205ENST00000454542 SHCBP1LQ9BZQ2 653 aa13.2□□□□□ -0.3
HDAC4-205ENST00000454542 CENPHQ9H3R5 247 aa13.2□□□□□ -0.3
HDAC4-205ENST00000454542 TUBB1Q9H4B7 451 aa13.2□□□□□ -0.3
HDAC4-205ENST00000454542 TRIM45Q9H8W5 580 aaPredicted RBP13.2□□□□□ -0.3
HDAC4-205ENST00000454542 DNAJC15Q9Y5T4 150 aa13.2□□□□□ -0.3
HDAC4-205ENST00000454542 MYOCOSA0A1B0GUC4 107 aa13.19□□□□□ -0.3
HDAC4-205ENST00000454542 A0A1W2PS29 197 aa13.19□□□□□ -0.3
HDAC4-205ENST00000454542 DYTNA2CJ06 578 aa13.19□□□□□ -0.3
HDAC4-205ENST00000454542 GLOD5A6NK44 160 aa13.19□□□□□ -0.3
HDAC4-205ENST00000454542 TMEM200CA6NKL6 621 aa13.19□□□□□ -0.3
HDAC4-205ENST00000454542 WASHC1A8K0Z3 465 aa13.19□□□□□ -0.3
HDAC4-205ENST00000454542 TMEM233B4DJY2 109 aa13.19□□□□□ -0.3
HDAC4-205ENST00000454542 PRKNO60260 465 aaPredicted RBP13.19□□□□□ -0.3
HDAC4-205ENST00000454542 CRCPO75575 148 aa13.19□□□□□ -0.3
HDAC4-205ENST00000454542 IFNA16P05015 189 aa13.19□□□□□ -0.3
HDAC4-205ENST00000454542 SLC35E2P0CK97 266 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms