RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 TBX1O43435 398 aa11.39□□□□□ -0.59
SMPD4-213ENST00000454468 VEGFDO43915 354 aa11.39□□□□□ -0.59
SMPD4-213ENST00000454468 SERPINB7O75635 380 aa11.39□□□□□ -0.59
SMPD4-213ENST00000454468 POLR2CP19387 275 aaPredicted RBP11.39□□□□□ -0.59
SMPD4-213ENST00000454468 CERS1P27544 350 aa11.39□□□□□ -0.59
SMPD4-213ENST00000454468 CNR2P34972 360 aa11.39□□□□□ -0.59
SMPD4-213ENST00000454468 UGT2B15P54855 530 aa11.39□□□□□ -0.59
SMPD4-213ENST00000454468 KCNJ10P78508 379 aa11.39□□□□□ -0.59
SMPD4-213ENST00000454468 DBPQ10586 325 aaPredicted RBP11.39□□□□□ -0.59
SMPD4-213ENST00000454468 AQP6Q13520 282 aa11.39□□□□□ -0.59
SMPD4-213ENST00000454468 C1orf61Q13536 156 aa11.39□□□□□ -0.59
SMPD4-213ENST00000454468 DEFB134Q4QY38 66 aa11.39□□□□□ -0.59
SMPD4-213ENST00000454468 PRSS36Q5K4E3 855 aa11.39□□□□□ -0.59
SMPD4-213ENST00000454468 BTLAQ7Z6A9 289 aa11.39□□□□□ -0.59
SMPD4-213ENST00000454468 OR8H2Q8N162 312 aa11.39□□□□□ -0.59
SMPD4-213ENST00000454468 CHCHD4Q8N4Q1 142 aa11.39□□□□□ -0.59
SMPD4-213ENST00000454468 HERVK_113Q902F9 699 aa11.39□□□□□ -0.59
SMPD4-213ENST00000454468 RDH12Q96NR8 316 aa11.39□□□□□ -0.59
SMPD4-213ENST00000454468 FAIM2Q9BWQ8 316 aa11.39□□□□□ -0.59
SMPD4-213ENST00000454468 PLA2G2FQ9BZM2 168 aa11.39□□□□□ -0.59
SMPD4-213ENST00000454468 DCSTAMPQ9H295 470 aa11.39□□□□□ -0.59
SMPD4-213ENST00000454468 ZBTB20Q9HC78 741 aaPredicted RBP11.39□□□□□ -0.59
SMPD4-213ENST00000454468 TMEM45AQ9NWC5 275 aa11.39□□□□□ -0.59
SMPD4-213ENST00000454468 CLDND1Q9NY35 253 aa11.39□□□□□ -0.59
SMPD4-213ENST00000454468 ASIC5Q9NY37 505 aa11.39□□□□□ -0.59
SMPD4-213ENST00000454468 BTNL2Q9UIR0 455 aa11.39□□□□□ -0.59
SMPD4-213ENST00000454468 SLC6A14Q9UN76 642 aa11.39□□□□□ -0.59
SMPD4-213ENST00000454468 PSMD11O00231 422 aa11.38□□□□□ -0.59
SMPD4-213ENST00000454468 TLX2O43763 284 aaPredicted RBP11.38□□□□□ -0.59
SMPD4-213ENST00000454468 TMPRSS11DO60235 418 aa11.38□□□□□ -0.59
SMPD4-213ENST00000454468 CAPNS1P04632 268 aa11.38□□□□□ -0.59
SMPD4-213ENST00000454468 GP2P55259 537 aaKnown RBP11.38□□□□□ -0.59
SMPD4-213ENST00000454468 ARMCX4Q5H9R4 360 aa11.38□□□□□ -0.59
SMPD4-213ENST00000454468 XAF1Q6GPH4 301 aa11.38□□□□□ -0.59
SMPD4-213ENST00000454468 KIAA1211LQ6NV74 962 aa11.38□□□□□ -0.59
SMPD4-213ENST00000454468 ANKRD53Q8N9V6 530 aa11.38□□□□□ -0.59
SMPD4-213ENST00000454468 ZNF420Q8TAQ5 688 aaPredicted RBP11.38□□□□□ -0.59
SMPD4-213ENST00000454468 SLC38A5Q8WUX1 472 aa11.38□□□□□ -0.59
SMPD4-213ENST00000454468 TP53INP1Q96A56 240 aa11.38□□□□□ -0.59
SMPD4-213ENST00000454468 LGALS12Q96DT0 336 aa11.38□□□□□ -0.59
SMPD4-213ENST00000454468 PCDHGA10Q9Y5H3 936 aa11.38□□□□□ -0.59
SMPD4-213ENST00000454468 TRBV4-1A0A0J9YWV2 114 aa11.38□□□□□ -0.59
SMPD4-213ENST00000454468 CPSF4LA6NMK7 179 aaKnown RBP11.38□□□□□ -0.59
SMPD4-213ENST00000454468 CLDN25C9JDP6 229 aa11.38□□□□□ -0.59
SMPD4-213ENST00000454468 GNB5O14775 395 aa11.38□□□□□ -0.59
SMPD4-213ENST00000454468 KDM1AO60341 852 aa11.38□□□□□ -0.59
SMPD4-213ENST00000454468 SOD1P00441 154 aa11.38□□□□□ -0.59
SMPD4-213ENST00000454468 ASGR2P07307 311 aa11.38□□□□□ -0.59
SMPD4-213ENST00000454468 HTR1AP08908 422 aa11.38□□□□□ -0.59
SMPD4-213ENST00000454468 ANXA8P13928 327 aa11.38□□□□□ -0.59
SMPD4-213ENST00000454468 TYRP1P17643 537 aa11.38□□□□□ -0.59
SMPD4-213ENST00000454468 DCKP27707 260 aa11.38□□□□□ -0.59
SMPD4-213ENST00000454468 IFNA8P32881 189 aa11.38□□□□□ -0.59
SMPD4-213ENST00000454468 TMBIM6P55061 237 aa11.38□□□□□ -0.59
SMPD4-213ENST00000454468 ITGA1P56199 1179 aa11.38□□□□□ -0.59
SMPD4-213ENST00000454468 TAS2R41P59536 307 aa11.38□□□□□ -0.59
SMPD4-213ENST00000454468 MAP4K2Q12851 820 aa11.38□□□□□ -0.59
SMPD4-213ENST00000454468 MTAPQ13126 283 aa11.38□□□□□ -0.59
SMPD4-213ENST00000454468 SHFQ7M4L6 423 aa11.38□□□□□ -0.59
SMPD4-213ENST00000454468 UBE2J2Q8N2K1 259 aa11.38□□□□□ -0.59
SMPD4-213ENST00000454468 CCL4L1Q8NHW4 92 aa11.38□□□□□ -0.59
SMPD4-213ENST00000454468 FGF14Q92915 247 aa11.38□□□□□ -0.59
SMPD4-213ENST00000454468 C16orf58Q96GQ5 468 aa11.38□□□□□ -0.59
SMPD4-213ENST00000454468 CAMK1GQ96NX5 476 aa11.38□□□□□ -0.59
SMPD4-213ENST00000454468 SLC17A9Q9BYT1 436 aa11.38□□□□□ -0.59
SMPD4-213ENST00000454468 KLHL3Q9UH77 587 aa11.38□□□□□ -0.59
SMPD4-213ENST00000454468 MAPRE3Q9UPY8 281 aa11.38□□□□□ -0.59
SMPD4-213ENST00000454468 LRRC72A6NJI9 287 aa11.38□□□□□ -0.59
SMPD4-213ENST00000454468 BTN3A3O00478 584 aa11.38□□□□□ -0.59
SMPD4-213ENST00000454468 NPC1O15118 1278 aa11.38□□□□□ -0.59
SMPD4-213ENST00000454468 PGRMC2O15173 223 aa11.38□□□□□ -0.59
SMPD4-213ENST00000454468 RNGTTO60942 597 aaKnown RBP11.38□□□□□ -0.59
SMPD4-213ENST00000454468 KLF8O95600 359 aaPredicted RBP11.38□□□□□ -0.59
SMPD4-213ENST00000454468 GASTP01350 101 aa11.38□□□□□ -0.59
SMPD4-213ENST00000454468 GADD45AP24522 165 aa11.38□□□□□ -0.59
SMPD4-213ENST00000454468 SIM1P81133 766 aaPredicted RBP11.38□□□□□ -0.59
SMPD4-213ENST00000454468 VEZF1Q14119 521 aa11.38□□□□□ -0.59
SMPD4-213ENST00000454468 EIF4HQ15056 248 aaKnown RBP11.38□□□□□ -0.59
SMPD4-213ENST00000454468 GPR19Q15760 415 aa11.38□□□□□ -0.59
SMPD4-213ENST00000454468 SNAPC1Q16533 368 aa11.38□□□□□ -0.59
SMPD4-213ENST00000454468 TSTQ16762 297 aaKnown RBP11.38□□□□□ -0.59
SMPD4-213ENST00000454468 ZNF630Q2M218 657 aaPredicted RBP11.38□□□□□ -0.59
SMPD4-213ENST00000454468 C18orf63Q68DL7 685 aa11.38□□□□□ -0.59
SMPD4-213ENST00000454468 KLHDC8AQ8IYD2 350 aa11.38□□□□□ -0.59
SMPD4-213ENST00000454468 ENTHD1Q8IYW4 607 aa11.38□□□□□ -0.59
SMPD4-213ENST00000454468 METTL4Q8N3J2 472 aa11.38□□□□□ -0.59
SMPD4-213ENST00000454468 TMIEQ8NEW7 156 aa11.38□□□□□ -0.59
SMPD4-213ENST00000454468 FAR1Q8WVX9 515 aa11.38□□□□□ -0.59
SMPD4-213ENST00000454468 Q96MT0 163 aa11.38□□□□□ -0.59
SMPD4-213ENST00000454468 CNPPD1Q9BV87 410 aa11.38□□□□□ -0.59
SMPD4-213ENST00000454468 NUAK2Q9H093 628 aa11.38□□□□□ -0.59
SMPD4-213ENST00000454468 SRMSQ9H3Y6 488 aa11.38□□□□□ -0.59
SMPD4-213ENST00000454468 DPEP2Q9H4A9 486 aa11.38□□□□□ -0.59
SMPD4-213ENST00000454468 NMNAT1Q9HAN9 279 aaPredicted RBP11.38□□□□□ -0.59
SMPD4-213ENST00000454468 MKLN1Q9UL63 735 aa11.38□□□□□ -0.59
SMPD4-213ENST00000454468 GPR52Q9Y2T5 361 aa11.38□□□□□ -0.59
SMPD4-213ENST00000454468 HCN4Q9Y3Q4 1203 aa11.38□□□□□ -0.59
SMPD4-213ENST00000454468 DNAH14Q0VDD8 3507 aa11.38□□□□□ -0.59
SMPD4-213ENST00000454468 A0A1W2PS29 197 aa11.37□□□□□ -0.59
SMPD4-213ENST00000454468 POM121BA6NF01 834 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms