RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 OR8D2Q9GZM6 311 aa18.01■□□□□ 0.47
USP40-207ENST00000450940 PRM3Q9NNZ6 103 aa18.01■□□□□ 0.47
USP40-207ENST00000450940 LYARQ9NX58 379 aaKnown RBP18.01■□□□□ 0.47
USP40-207ENST00000450940 NCOA6Q14686 2063 aaPredicted RBP18.01■□□□□ 0.47
USP40-207ENST00000450940 PCNX1Q96RV3 2341 aa18.01■□□□□ 0.47
USP40-207ENST00000450940 CCL21O00585 134 aa18■□□□□ 0.47
USP40-207ENST00000450940 PEX1O43933 1283 aa18■□□□□ 0.47
USP40-207ENST00000450940 SEMA3DO95025 777 aa18■□□□□ 0.47
USP40-207ENST00000450940 IGKV3-11P04433 115 aa18■□□□□ 0.47
USP40-207ENST00000450940 RPS17P08708 135 aaKnown RBP18■□□□□ 0.47
USP40-207ENST00000450940 ZNF24P17028 368 aa18■□□□□ 0.47
USP40-207ENST00000450940 TLX1P31314 330 aaPredicted RBP18■□□□□ 0.47
USP40-207ENST00000450940 CCNG1P51959 295 aa18■□□□□ 0.47
USP40-207ENST00000450940 HK2P52789 917 aa18■□□□□ 0.47
USP40-207ENST00000450940 RNF4P78317 190 aa18■□□□□ 0.47
USP40-207ENST00000450940 GGTA1PQ4G0N0 100 aa18■□□□□ 0.47
USP40-207ENST00000450940 LGSNQ5TDP6 509 aa18■□□□□ 0.47
USP40-207ENST00000450940 C18orf63Q68DL7 685 aa18■□□□□ 0.47
USP40-207ENST00000450940 BNC2Q6ZN30 1099 aaPredicted RBP18■□□□□ 0.47
USP40-207ENST00000450940 OR5L2Q8NGL0 311 aa18■□□□□ 0.47
USP40-207ENST00000450940 ITLN2Q8WWU7 325 aaPredicted RBP18■□□□□ 0.47
USP40-207ENST00000450940 CCDC120Q96HB5 630 aa18■□□□□ 0.47
USP40-207ENST00000450940 SENP5Q96HI0 755 aaPredicted RBP18■□□□□ 0.47
USP40-207ENST00000450940 NSUN5Q96P11 429 aaKnown RBP18■□□□□ 0.47
USP40-207ENST00000450940 CDK15Q96Q40 435 aa18■□□□□ 0.47
USP40-207ENST00000450940 SERPINI1Q99574 410 aa18■□□□□ 0.47
USP40-207ENST00000450940 TXLNGYQ9BZA5 131 aa18■□□□□ 0.47
USP40-207ENST00000450940 TSPAN10Q9H1Z9 355 aaPredicted RBP18■□□□□ 0.47
USP40-207ENST00000450940 LIN28AQ9H9Z2 209 aaKnown RBP18■□□□□ 0.47
USP40-207ENST00000450940 TIMMDC1Q9NPL8 285 aa18■□□□□ 0.47
USP40-207ENST00000450940 SUCOQ9UBS9 1254 aaKnown RBP18■□□□□ 0.47
USP40-207ENST00000450940 NOTCH2Q04721 2471 aa18■□□□□ 0.47
USP40-207ENST00000450940 EXOC1LA0A1B0GW35 172 aa17.99■□□□□ 0.47
USP40-207ENST00000450940 A0A1W2PR48 441 aa17.99■□□□□ 0.47
USP40-207ENST00000450940 RIPK2O43353 540 aa17.99■□□□□ 0.47
USP40-207ENST00000450940 TMPRSS11DO60235 418 aa17.99■□□□□ 0.47
USP40-207ENST00000450940 FAM58BPP0C7Q3 252 aa17.99■□□□□ 0.47
USP40-207ENST00000450940 COX7A2P14406 83 aa17.99■□□□□ 0.47
USP40-207ENST00000450940 BUD31P41223 144 aaPredicted RBP17.99■□□□□ 0.47
USP40-207ENST00000450940 MEOX1P50221 254 aa17.99■□□□□ 0.47
USP40-207ENST00000450940 CASP6P55212 293 aa17.99■□□□□ 0.47
USP40-207ENST00000450940 FOLH1Q04609 750 aa17.99■□□□□ 0.47
USP40-207ENST00000450940 ART3Q13508 389 aa17.99■□□□□ 0.47
USP40-207ENST00000450940 C3AR1Q16581 482 aa17.99■□□□□ 0.47
USP40-207ENST00000450940 FRG2Q64ET8 278 aa17.99■□□□□ 0.47
USP40-207ENST00000450940 OR4N5Q8IXE1 308 aa17.99■□□□□ 0.47
USP40-207ENST00000450940 SLC34A3Q8N130 599 aa17.99■□□□□ 0.47
USP40-207ENST00000450940 GHDCQ8N2G8 530 aa17.99■□□□□ 0.47
USP40-207ENST00000450940 MYRIPQ8NFW9 859 aa17.99■□□□□ 0.47
USP40-207ENST00000450940 ZNF483Q8TF39 744 aaPredicted RBP17.99■□□□□ 0.47
USP40-207ENST00000450940 ATP6V1E2Q96A05 226 aa17.99■□□□□ 0.47
USP40-207ENST00000450940 MTBPQ96DY7 904 aa17.99■□□□□ 0.47
USP40-207ENST00000450940 RBM18Q96H35 190 aaKnown RBP17.99■□□□□ 0.47
USP40-207ENST00000450940 DGAT2Q96PD7 388 aa17.99■□□□□ 0.47
USP40-207ENST00000450940 FRG2BQ96QU4 278 aa17.99■□□□□ 0.47
USP40-207ENST00000450940 FETUBQ9UGM5 382 aa17.99■□□□□ 0.47
USP40-207ENST00000450940 A8MVJ9 347 aa17.98■□□□□ 0.47
USP40-207ENST00000450940 WWP2O00308 870 aa17.98■□□□□ 0.47
USP40-207ENST00000450940 OR6B1O95007 311 aa17.98■□□□□ 0.47
USP40-207ENST00000450940 GPR75O95800 540 aa17.98■□□□□ 0.47
USP40-207ENST00000450940 GALNSP34059 522 aa17.98■□□□□ 0.47
USP40-207ENST00000450940 PLIN5Q00G26 463 aa17.98■□□□□ 0.47
USP40-207ENST00000450940 MPEG1Q2M385 716 aa17.98■□□□□ 0.47
USP40-207ENST00000450940 ZNF787Q6DD87 383 aa17.98■□□□□ 0.47
USP40-207ENST00000450940 DGAT2L6Q6ZPD8 337 aa17.98■□□□□ 0.47
USP40-207ENST00000450940 LCA5Q86VQ0 697 aa17.98■□□□□ 0.47
USP40-207ENST00000450940 NUDT13Q86X67 352 aa17.98■□□□□ 0.47
USP40-207ENST00000450940 ST13P4Q8IZP2 240 aaPredicted RBP17.98■□□□□ 0.47
USP40-207ENST00000450940 PSD4Q8NDX1 1056 aa17.98■□□□□ 0.47
USP40-207ENST00000450940 NUBPLQ8TB37 319 aa17.98■□□□□ 0.47
USP40-207ENST00000450940 ASB15Q8WXK1 588 aa17.98■□□□□ 0.47
USP40-207ENST00000450940 FBXL20Q96IG2 436 aa17.98■□□□□ 0.47
USP40-207ENST00000450940 MAGED4Q96JG8 741 aa17.98■□□□□ 0.47
USP40-207ENST00000450940 PELOQ9BRX2 385 aaKnown RBP17.98■□□□□ 0.47
USP40-207ENST00000450940 DEPPQ9NTK1 212 aa17.98■□□□□ 0.47
USP40-207ENST00000450940 HPF1Q9NWY4 346 aa17.98■□□□□ 0.47
USP40-207ENST00000450940 COPS7AQ9UBW8 275 aa17.98■□□□□ 0.47
USP40-207ENST00000450940 A8MT66 165 aa17.97■□□□□ 0.47
USP40-207ENST00000450940 ZNF354AO60765 605 aaPredicted RBP17.97■□□□□ 0.47
USP40-207ENST00000450940 ALOX15P16050 662 aaPredicted RBP17.97■□□□□ 0.47
USP40-207ENST00000450940 SOX3P41225 446 aa17.97■□□□□ 0.47
USP40-207ENST00000450940 SPRED3Q2MJR0 410 aa17.97■□□□□ 0.47
USP40-207ENST00000450940 CYP20A1Q6UW02 462 aa17.97■□□□□ 0.47
USP40-207ENST00000450940 IL20RBQ6UXL0 311 aa17.97■□□□□ 0.47
USP40-207ENST00000450940 RPTNQ6XPR3 784 aa17.97■□□□□ 0.47
USP40-207ENST00000450940 FGD2Q7Z6J4 655 aa17.97■□□□□ 0.47
USP40-207ENST00000450940 MILR1Q7Z6M3 343 aa17.97■□□□□ 0.47
USP40-207ENST00000450940 CNPY4Q8N129 248 aa17.97■□□□□ 0.47
USP40-207ENST00000450940 ZNF808Q8N4W9 903 aaPredicted RBP17.97■□□□□ 0.47
USP40-207ENST00000450940 OR4F6Q8NGB9 312 aa17.97■□□□□ 0.47
USP40-207ENST00000450940 PPWD1Q96BP3 646 aaKnown RBP17.97■□□□□ 0.47
USP40-207ENST00000450940 MTFMTQ96DP5 389 aaKnown RBP17.97■□□□□ 0.47
USP40-207ENST00000450940 ART5Q96L15 291 aa17.97■□□□□ 0.47
USP40-207ENST00000450940 SEMA4BQ9NPR2 832 aaPredicted RBP17.97■□□□□ 0.47
USP40-207ENST00000450940 PLSCR2Q9NRY7 297 aa17.97■□□□□ 0.47
USP40-207ENST00000450940 RYDENQ9NUL5 291 aaKnown RBP17.97■□□□□ 0.47
USP40-207ENST00000450940 TINAGQ9UJW2 476 aa17.97■□□□□ 0.47
USP40-207ENST00000450940 ADAM29Q9UKF5 820 aa17.97■□□□□ 0.47
USP40-207ENST00000450940 ERVK-11Q9UQG0 969 aa17.97■□□□□ 0.47
USP40-207ENST00000450940 A0A1B0GTL3 188 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms