RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 FGF17O60258 216 aa13.12□□□□□ -0.31
GTF3C3-206ENST00000448539 DPM1O60762 260 aa13.12□□□□□ -0.31
GTF3C3-206ENST00000448539 PRKRAO75569 313 aaKnown RBP13.12□□□□□ -0.31
GTF3C3-206ENST00000448539 CELA2AP08217 269 aa13.12□□□□□ -0.31
GTF3C3-206ENST00000448539 LINC00032P0C843 101 aa13.12□□□□□ -0.31
GTF3C3-206ENST00000448539 ITGAMP11215 1152 aa13.12□□□□□ -0.31
GTF3C3-206ENST00000448539 PIK3R1P27986 724 aa13.12□□□□□ -0.31
GTF3C3-206ENST00000448539 SLC1A6P48664 564 aa13.12□□□□□ -0.31
GTF3C3-206ENST00000448539 PLIN5Q00G26 463 aa13.12□□□□□ -0.31
GTF3C3-206ENST00000448539 FOLH1Q04609 750 aa13.12□□□□□ -0.31
GTF3C3-206ENST00000448539 TERF2Q15554 542 aa13.12□□□□□ -0.31
GTF3C3-206ENST00000448539 ELAVL1Q15717 326 aaKnown RBP13.12□□□□□ -0.31
GTF3C3-206ENST00000448539 CRB2Q5IJ48 1285 aa13.12□□□□□ -0.31
GTF3C3-206ENST00000448539 ISLR2Q6UXK2 745 aa13.12□□□□□ -0.31
GTF3C3-206ENST00000448539 TRIM42Q8IWZ5 723 aa13.12□□□□□ -0.31
GTF3C3-206ENST00000448539 OR4N5Q8IXE1 308 aa13.12□□□□□ -0.31
GTF3C3-206ENST00000448539 KIRREL3Q8IZU9 778 aa13.12□□□□□ -0.31
GTF3C3-206ENST00000448539 ZADH2Q8N4Q0 377 aa13.12□□□□□ -0.31
GTF3C3-206ENST00000448539 SIRT6Q8N6T7 355 aa13.12□□□□□ -0.31
GTF3C3-206ENST00000448539 TEX19Q8NA77 164 aa13.12□□□□□ -0.31
GTF3C3-206ENST00000448539 OR6Y1Q8NGX8 325 aa13.12□□□□□ -0.31
GTF3C3-206ENST00000448539 TWIST2Q8WVJ9 160 aa13.12□□□□□ -0.31
GTF3C3-206ENST00000448539 ANKRD9Q96BM1 317 aaPredicted RBP13.12□□□□□ -0.31
GTF3C3-206ENST00000448539 RBM18Q96H35 190 aaKnown RBP13.12□□□□□ -0.31
GTF3C3-206ENST00000448539 DGAT2Q96PD7 388 aa13.12□□□□□ -0.31
GTF3C3-206ENST00000448539 PELOQ9BRX2 385 aaKnown RBP13.12□□□□□ -0.31
GTF3C3-206ENST00000448539 ILKAPQ9H0C8 392 aaPredicted RBP13.12□□□□□ -0.31
GTF3C3-206ENST00000448539 LRTM1Q9HBL6 345 aa13.12□□□□□ -0.31
GTF3C3-206ENST00000448539 MMP25Q9NPA2 562 aa13.12□□□□□ -0.31
GTF3C3-206ENST00000448539 TEX10Q9NXF1 929 aaPredicted RBP13.12□□□□□ -0.31
GTF3C3-206ENST00000448539 VTI1BQ9UEU0 232 aa13.12□□□□□ -0.31
GTF3C3-206ENST00000448539 PSME2Q9UL46 239 aa13.12□□□□□ -0.31
GTF3C3-206ENST00000448539 HEMK1Q9Y5R4 338 aaPredicted RBP13.12□□□□□ -0.31
GTF3C3-206ENST00000448539 DNAJC15Q9Y5T4 150 aa13.12□□□□□ -0.31
GTF3C3-206ENST00000448539 UQCRHLA0A096LP55 91 aa13.11□□□□□ -0.31
GTF3C3-206ENST00000448539 C1orf226A1L170 272 aa13.11□□□□□ -0.31
GTF3C3-206ENST00000448539 TMEM233B4DJY2 109 aa13.11□□□□□ -0.31
GTF3C3-206ENST00000448539 TGFBR3LH3BV60 316 aa13.11□□□□□ -0.31
GTF3C3-206ENST00000448539 K7EM74 188 aa13.11□□□□□ -0.31
GTF3C3-206ENST00000448539 OR10H2O60403 315 aa13.11□□□□□ -0.31
GTF3C3-206ENST00000448539 SEC22BO75396 215 aa13.11□□□□□ -0.31
GTF3C3-206ENST00000448539 LYPLA1O75608 230 aaPredicted RBP13.11□□□□□ -0.31
GTF3C3-206ENST00000448539 GPR75O95800 540 aa13.11□□□□□ -0.31
GTF3C3-206ENST00000448539 PDGFAP04085 211 aa13.11□□□□□ -0.31
GTF3C3-206ENST00000448539 ANXA4P09525 319 aaPredicted RBP13.11□□□□□ -0.31
GTF3C3-206ENST00000448539 ALOX15P16050 662 aaPredicted RBP13.11□□□□□ -0.31
GTF3C3-206ENST00000448539 TIA1P31483 386 aaKnown RBP eCLIP13.11□□□□□ -0.31
GTF3C3-206ENST00000448539 GSTM5P46439 218 aa13.11□□□□□ -0.31
GTF3C3-206ENST00000448539 ALDH9A1P49189 494 aa13.11□□□□□ -0.31
GTF3C3-206ENST00000448539 WDR4P57081 412 aaKnown RBP13.11□□□□□ -0.31
GTF3C3-206ENST00000448539 KLRB1Q12918 225 aa13.11□□□□□ -0.31
GTF3C3-206ENST00000448539 NR6A1Q15406 480 aa13.11□□□□□ -0.31
GTF3C3-206ENST00000448539 ABHD17BQ5VST6 288 aa13.11□□□□□ -0.31
GTF3C3-206ENST00000448539 GALNT18Q6P9A2 607 aa13.11□□□□□ -0.31
GTF3C3-206ENST00000448539 RNF165Q6ZSG1 346 aa13.11□□□□□ -0.31
GTF3C3-206ENST00000448539 PTRH1Q86Y79 214 aaKnown RBP13.11□□□□□ -0.31
GTF3C3-206ENST00000448539 SLC5A8Q8N695 610 aa13.11□□□□□ -0.31
GTF3C3-206ENST00000448539 B3GNT7Q8NFL0 401 aa13.11□□□□□ -0.31
GTF3C3-206ENST00000448539 OR4K14Q8NGD5 310 aa13.11□□□□□ -0.31
GTF3C3-206ENST00000448539 FAM76AQ8TAV0 307 aa13.11□□□□□ -0.31
GTF3C3-206ENST00000448539 TM4SF18Q96CE8 201 aa13.11□□□□□ -0.31
GTF3C3-206ENST00000448539 METTL2AQ96IZ6 378 aaKnown RBP13.11□□□□□ -0.31
GTF3C3-206ENST00000448539 SH3GL2Q99962 352 aa13.11□□□□□ -0.31
GTF3C3-206ENST00000448539 EBPLQ9BY08 206 aa13.11□□□□□ -0.31
GTF3C3-206ENST00000448539 C1orf109Q9NX04 203 aa13.11□□□□□ -0.31
GTF3C3-206ENST00000448539 SIRT5Q9NXA8 310 aa13.11□□□□□ -0.31
GTF3C3-206ENST00000448539 ZDHHC2Q9UIJ5 367 aa13.11□□□□□ -0.31
GTF3C3-206ENST00000448539 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.11□□□□□ -0.31
GTF3C3-206ENST00000448539 RAP2CQ9Y3L5 183 aa13.11□□□□□ -0.31
GTF3C3-206ENST00000448539 PCDHA9Q9Y5H5 950 aa13.11□□□□□ -0.31
GTF3C3-206ENST00000448539 PTGDR2Q9Y5Y4 395 aa13.11□□□□□ -0.31
GTF3C3-206ENST00000448539 MED13Q9UHV7 2174 aa13.1□□□□□ -0.31
GTF3C3-206ENST00000448539 C17orf105B2RV13 164 aa13.1□□□□□ -0.31
GTF3C3-206ENST00000448539 PIP5K1BO14986 540 aa13.1□□□□□ -0.31
GTF3C3-206ENST00000448539 PGRMC2O15173 223 aa13.1□□□□□ -0.31
GTF3C3-206ENST00000448539 ITM2AO43736 263 aa13.1□□□□□ -0.31
GTF3C3-206ENST00000448539 SKAP2O75563 359 aaPredicted RBP13.1□□□□□ -0.31
GTF3C3-206ENST00000448539 DRD2P14416 443 aa13.1□□□□□ -0.31
GTF3C3-206ENST00000448539 STT3AP46977 705 aa13.1□□□□□ -0.31
GTF3C3-206ENST00000448539 CLCN2P51788 898 aa13.1□□□□□ -0.31
GTF3C3-206ENST00000448539 IGLV3-21P80748 117 aaPredicted RBP13.1□□□□□ -0.31
GTF3C3-206ENST00000448539 ZNF763Q0D2J5 394 aa13.1□□□□□ -0.31
GTF3C3-206ENST00000448539 MFAP5Q13361 173 aa13.1□□□□□ -0.31
GTF3C3-206ENST00000448539 HEPACAMQ14CZ8 416 aa13.1□□□□□ -0.31
GTF3C3-206ENST00000448539 UGT3A2Q3SY77 523 aa13.1□□□□□ -0.31
GTF3C3-206ENST00000448539 TTMPQ5BVD1 217 aa13.1□□□□□ -0.31
GTF3C3-206ENST00000448539 ATG16L1Q676U5 607 aa13.1□□□□□ -0.31
GTF3C3-206ENST00000448539 LINC00696Q6ZRV3 163 aa13.1□□□□□ -0.31
GTF3C3-206ENST00000448539 ST13P4Q8IZP2 240 aaPredicted RBP13.1□□□□□ -0.31
GTF3C3-206ENST00000448539 MORN4Q8NDC4 146 aa13.1□□□□□ -0.31
GTF3C3-206ENST00000448539 OR14A16Q8NHC5 309 aa13.1□□□□□ -0.31
GTF3C3-206ENST00000448539 CDC26Q8NHZ8 85 aa13.1□□□□□ -0.31
GTF3C3-206ENST00000448539 DNAJB14Q8TBM8 379 aa13.1□□□□□ -0.31
GTF3C3-206ENST00000448539 VMP1Q96GC9 406 aa13.1□□□□□ -0.31
GTF3C3-206ENST00000448539 ZNF354BQ96LW1 612 aa13.1□□□□□ -0.31
GTF3C3-206ENST00000448539 LMF1Q96S06 567 aa13.1□□□□□ -0.31
GTF3C3-206ENST00000448539 CCT7Q99832 543 aa13.1□□□□□ -0.31
GTF3C3-206ENST00000448539 TUBB1Q9H4B7 451 aa13.1□□□□□ -0.31
GTF3C3-206ENST00000448539 ABI3Q9P2A4 366 aa13.1□□□□□ -0.31
GTF3C3-206ENST00000448539 DLGAP4Q9Y2H0 992 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms