RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 TMEM201Q5SNT2 666 aa18.32■□□□□ 0.52
HMGA1-205ENST00000447654 COL13A1Q5TAT6 717 aaPredicted RBP18.32■□□□□ 0.52
HMGA1-205ENST00000447654 BCL2L15Q5TBC7 163 aa18.32■□□□□ 0.52
HMGA1-205ENST00000447654 SDHAF4Q5VUM1 108 aa18.32■□□□□ 0.52
HMGA1-205ENST00000447654 MACC1Q6ZN28 852 aa18.32■□□□□ 0.52
HMGA1-205ENST00000447654 PDZD3Q86UT5 571 aa18.32■□□□□ 0.52
HMGA1-205ENST00000447654 METTL23Q86XA0 190 aa18.32■□□□□ 0.52
HMGA1-205ENST00000447654 CAMKVQ8NCB2 501 aa18.32■□□□□ 0.52
HMGA1-205ENST00000447654 C7orf57Q8NEG2 295 aa18.32■□□□□ 0.52
HMGA1-205ENST00000447654 TEX47Q8TBZ9 253 aa18.32■□□□□ 0.52
HMGA1-205ENST00000447654 PCNPQ8WW12 178 aaKnown RBP18.32■□□□□ 0.52
HMGA1-205ENST00000447654 SUSD3Q96L08 255 aa18.32■□□□□ 0.52
HMGA1-205ENST00000447654 TBATAQ96M53 351 aa18.32■□□□□ 0.52
HMGA1-205ENST00000447654 MS4A7Q9GZW8 240 aaPredicted RBP18.32■□□□□ 0.52
HMGA1-205ENST00000447654 BIN3Q9NQY0 253 aa18.32■□□□□ 0.52
HMGA1-205ENST00000447654 DLL4Q9NR61 685 aa18.32■□□□□ 0.52
HMGA1-205ENST00000447654 EIF2B4Q9UI10 523 aaKnown RBP18.32■□□□□ 0.52
HMGA1-205ENST00000447654 MAFFQ9ULX9 164 aa18.32■□□□□ 0.52
HMGA1-205ENST00000447654 GSTK1Q9Y2Q3 226 aa18.32■□□□□ 0.52
HMGA1-205ENST00000447654 SCN2BO60939 215 aa18.31■□□□□ 0.52
HMGA1-205ENST00000447654 GLUD1P00367 558 aa18.31■□□□□ 0.52
HMGA1-205ENST00000447654 CDKL4Q5MAI5 379 aa18.31■□□□□ 0.52
HMGA1-205ENST00000447654 SLC27A4Q6P1M0 643 aa18.31■□□□□ 0.52
HMGA1-205ENST00000447654 PAQR3Q6TCH7 311 aa18.31■□□□□ 0.52
HMGA1-205ENST00000447654 SCD5Q86SK9 330 aa18.31■□□□□ 0.52
HMGA1-205ENST00000447654 GPSM1Q86YR5 675 aa18.31■□□□□ 0.52
HMGA1-205ENST00000447654 ARHGAP12Q8IWW6 846 aa18.31■□□□□ 0.52
HMGA1-205ENST00000447654 CCDC36Q8IYA8 594 aa18.31■□□□□ 0.52
HMGA1-205ENST00000447654 OR52B6Q8NGF0 335 aa18.31■□□□□ 0.52
HMGA1-205ENST00000447654 OR4C15Q8NGM1 316 aa18.31■□□□□ 0.52
HMGA1-205ENST00000447654 NELL2Q99435 816 aa18.31■□□□□ 0.52
HMGA1-205ENST00000447654 RSPH9Q9H1X1 276 aaPredicted RBP18.31■□□□□ 0.52
HMGA1-205ENST00000447654 ATXN3LQ9H3M9 355 aa18.31■□□□□ 0.52
HMGA1-205ENST00000447654 GAREM1Q9H706 876 aa18.31■□□□□ 0.52
HMGA1-205ENST00000447654 NMUR1Q9HB89 426 aa18.31■□□□□ 0.52
HMGA1-205ENST00000447654 ABCC13Q9NSE7 274 aa18.31■□□□□ 0.52
HMGA1-205ENST00000447654 DCAF16Q9NXF7 216 aa18.31■□□□□ 0.52
HMGA1-205ENST00000447654 KCTD5Q9NXV2 234 aa18.31■□□□□ 0.52
HMGA1-205ENST00000447654 NUDT4Q9NZJ9 180 aa18.31■□□□□ 0.52
HMGA1-205ENST00000447654 GBF1Q92538 1859 aa18.31■□□□□ 0.52
HMGA1-205ENST00000447654 NUPL2O15504 423 aaKnown RBP18.31■□□□□ 0.52
HMGA1-205ENST00000447654 SSX5O60225 188 aa18.31■□□□□ 0.52
HMGA1-205ENST00000447654 ITPKAP23677 461 aa18.31■□□□□ 0.52
HMGA1-205ENST00000447654 POU1F1P28069 291 aa18.31■□□□□ 0.52
HMGA1-205ENST00000447654 GPR15P49685 360 aa18.31■□□□□ 0.52
HMGA1-205ENST00000447654 DCDC1P59894 354 aa18.31■□□□□ 0.52
HMGA1-205ENST00000447654 OPCMLQ14982 345 aa18.31■□□□□ 0.52
HMGA1-205ENST00000447654 ABRAXAS2Q15018 415 aa18.31■□□□□ 0.52
HMGA1-205ENST00000447654 PLK5Q496M5 336 aa18.31■□□□□ 0.52
HMGA1-205ENST00000447654 PTCHD4Q6ZW05 846 aa18.31■□□□□ 0.52
HMGA1-205ENST00000447654 ISYNA1Q9NPH2 558 aa18.31■□□□□ 0.52
HMGA1-205ENST00000447654 EPHA6Q9UF33 1036 aa18.31■□□□□ 0.52
HMGA1-205ENST00000447654 PIPSLA2A3N6 862 aa18.3■□□□□ 0.52
HMGA1-205ENST00000447654 OR6C65A6NJZ3 312 aa18.3■□□□□ 0.52
HMGA1-205ENST00000447654 ZAR1LA6NP61 321 aa18.3■□□□□ 0.52
HMGA1-205ENST00000447654 CDC7O00311 574 aa18.3■□□□□ 0.52
HMGA1-205ENST00000447654 PSIP1O75475 530 aaKnown RBP18.3■□□□□ 0.52
HMGA1-205ENST00000447654 ADRB1P08588 477 aa18.3■□□□□ 0.52
HMGA1-205ENST00000447654 NMBP08949 121 aa18.3■□□□□ 0.52
HMGA1-205ENST00000447654 GPX2P18283 190 aa18.3■□□□□ 0.52
HMGA1-205ENST00000447654 SSTR2P30874 369 aa18.3■□□□□ 0.52
HMGA1-205ENST00000447654 LCN1P31025 176 aa18.3■□□□□ 0.52
HMGA1-205ENST00000447654 FGF9P31371 208 aaPredicted RBP18.3■□□□□ 0.52
HMGA1-205ENST00000447654 STC1P52823 247 aa18.3■□□□□ 0.52
HMGA1-205ENST00000447654 KCNJ10P78508 379 aa18.3■□□□□ 0.52
HMGA1-205ENST00000447654 P2RY14Q15391 338 aa18.3■□□□□ 0.52
HMGA1-205ENST00000447654 PDSS1Q5T2R2 415 aa18.3■□□□□ 0.52
HMGA1-205ENST00000447654 ZNF648Q5T619 568 aaPredicted RBP18.3■□□□□ 0.52
HMGA1-205ENST00000447654 DOK6Q6PKX4 331 aa18.3■□□□□ 0.52
HMGA1-205ENST00000447654 FAM46DQ8NEK8 389 aa18.3■□□□□ 0.52
HMGA1-205ENST00000447654 UBL7Q96S82 380 aaPredicted RBP18.3■□□□□ 0.52
HMGA1-205ENST00000447654 ZNF275Q9NSD4 429 aaPredicted RBP18.3■□□□□ 0.52
HMGA1-205ENST00000447654 TINAGQ9UJW2 476 aa18.3■□□□□ 0.52
HMGA1-205ENST00000447654 HCN2Q9UL51 889 aa18.3■□□□□ 0.52
HMGA1-205ENST00000447654 CASP8AP2Q9UKL3 1982 aa18.3■□□□□ 0.52
HMGA1-205ENST00000447654 NPEPPSL1A6NEC2 478 aa18.3■□□□□ 0.52
HMGA1-205ENST00000447654 HNRNPCL2B2RXH8 293 aa18.3■□□□□ 0.52
HMGA1-205ENST00000447654 KPNA3O00505 521 aaPredicted RBP18.3■□□□□ 0.52
HMGA1-205ENST00000447654 KCNK5O95279 499 aa18.3■□□□□ 0.52
HMGA1-205ENST00000447654 RORAP35398 523 aa18.3■□□□□ 0.52
HMGA1-205ENST00000447654 CLDN8P56748 225 aa18.3■□□□□ 0.52
HMGA1-205ENST00000447654 NOMO2Q5JPE7 1267 aa18.3■□□□□ 0.52
HMGA1-205ENST00000447654 FAM198BQ6UWH4 519 aa18.3■□□□□ 0.52
HMGA1-205ENST00000447654 TRIM46Q7Z4K8 759 aa18.3■□□□□ 0.52
HMGA1-205ENST00000447654 SCRN2Q96FV2 425 aa18.3■□□□□ 0.52
HMGA1-205ENST00000447654 IMP4Q96G21 291 aaKnown RBP18.3■□□□□ 0.52
HMGA1-205ENST00000447654 GPR63Q9BZJ6 419 aa18.3■□□□□ 0.52
HMGA1-205ENST00000447654 TTYH1Q9H313 450 aaPredicted RBP18.3■□□□□ 0.52
HMGA1-205ENST00000447654 DPAGT1Q9H3H5 408 aa18.3■□□□□ 0.52
HMGA1-205ENST00000447654 TMEM5Q9Y2B1 443 aa18.3■□□□□ 0.52
HMGA1-205ENST00000447654 ASB1Q9Y576 335 aa18.3■□□□□ 0.52
HMGA1-205ENST00000447654 FRMPD3Q5JV73 1810 aa18.29■□□□□ 0.52
HMGA1-205ENST00000447654 PATJQ8NI35 1801 aa18.29■□□□□ 0.52
HMGA1-205ENST00000447654 GPR171O14626 319 aa18.29■□□□□ 0.52
HMGA1-205ENST00000447654 PDCD5O14737 125 aa18.29■□□□□ 0.52
HMGA1-205ENST00000447654 HBQ1P09105 142 aa18.29■□□□□ 0.52
HMGA1-205ENST00000447654 BDKRB1P46663 353 aa18.29■□□□□ 0.52
HMGA1-205ENST00000447654 C2orf80Q0P641 193 aa18.29■□□□□ 0.52
HMGA1-205ENST00000447654 USP39Q53GS9 565 aaKnown RBP18.29■□□□□ 0.52
HMGA1-205ENST00000447654 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms