RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 OR2A1Q8NGT9 310 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 RAB3IL1Q8TBN0 382 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 ASB15Q8WXK1 588 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 STARD4Q96DR4 205 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 IMP4Q96G21 291 aaKnown RBP2.94□□□□□ -1.94
PMS1-215ENST00000447232 SGCZQ96LD1 299 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 TEKT5Q96M29 485 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 CCDC140Q96MF4 163 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 IL17FQ96PD4 163 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 MCEEQ96PE7 176 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 FAM111AQ96PZ2 611 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 OR1F2PQ96R84 312 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 RASL10BQ96S79 203 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 METTL17Q9H7H0 456 aaPredicted RBP2.94□□□□□ -1.94
PMS1-215ENST00000447232 SACM1LQ9NTJ5 587 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 HCN3Q9P1Z3 774 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 PCSK1NQ9UHG2 260 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 SH2B3Q9UQQ2 575 aa2.94□□□□□ -1.94
PMS1-215ENST00000447232 TRBV11-1A0A0K0K1C0 115 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 A0A1W2PP18 115 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 SLC5A10A0PJK1 596 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 C9orf118A6NHY6 69 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 PES1O00541 588 aaKnown RBP2.93□□□□□ -1.94
PMS1-215ENST00000447232 B4GALT2O60909 372 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 CDC123O75794 336 aaPredicted RBP2.93□□□□□ -1.94
PMS1-215ENST00000447232 SRP72O76094 671 aaKnown RBP2.93□□□□□ -1.94
PMS1-215ENST00000447232 CSF3P09919 207 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 RALBP11234 206 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 APEHP13798 732 aaKnown RBP2.93□□□□□ -1.94
PMS1-215ENST00000447232 POU2F1P14859 743 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 CHRNB2P17787 502 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 IL10P22301 178 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 GCH1P30793 250 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 STX17P56962 302 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 MEF2AQ02078 507 aaPredicted RBP2.93□□□□□ -1.94
PMS1-215ENST00000447232 BEAN1Q3B7T3 259 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 ZNF658Q5TYW1 1059 aaPredicted RBP2.93□□□□□ -1.94
PMS1-215ENST00000447232 C11orf87Q6NUJ2 197 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 GBP6Q6ZN66 633 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 ZNF677Q86XU0 584 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 PHF13Q86YI8 300 aaPredicted RBP2.93□□□□□ -1.94
PMS1-215ENST00000447232 GCNT2Q8N0V5 402 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 B3GNT7Q8NFL0 401 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 HMGCLL1Q8TB92 370 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 ZCCHC10Q8TBK6 192 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 NEUROG1Q92886 237 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 UCN3Q969E3 161 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 DCUN1D1Q96GG9 259 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 WWC2-AS2Q96NR7 200 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 CDIP1Q9H305 208 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 VPS37BQ9H9H4 285 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 PROK2Q9HC23 129 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 ESM1Q9NQ30 184 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 ADAM22Q9P0K1 906 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 CLCF1Q9UBD9 225 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 FBXW2Q9UKT8 454 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 IKZF3Q9UKT9 509 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 CAMK2AQ9UQM7 478 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 SCN3AQ9NY46 2000 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 DNAH9Q9NYC9 4486 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 IGKV3D-11A0A0A0MRZ8 115 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 IGHV4-61A0A0C4DH41 118 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 IGKV1-8A0A0C4DH67 115 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 FAM237AA0A1B0GTK4 181 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 A0A1B0GVL5 298 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 A0A1W2PPV9 198 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 TCRBV5S2A0A599 114 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 TCRBV16S1A1N1A0A5B0 115 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 B2RBV5 119 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 TXNDC9O14530 226 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 AKAP8O43823 692 aaKnown RBP2.93□□□□□ -1.94
PMS1-215ENST00000447232 MFSD11O43934 449 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 VPS26AO75436 327 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 CGAP01215 116 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 ATP1A3P13637 1013 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 PPP3CBP16298 524 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 MIPP30301 263 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 PIGAP37287 484 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 ME1P48163 572 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 GFRA1P56159 465 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 KCNJ2P63252 427 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 XIAPP98170 497 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 CDR2Q01850 454 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 RELAQ04206 551 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 KIF5AQ12840 1032 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 ZBTB17Q13105 803 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 LSAMPQ13449 338 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 RCAN2Q14206 197 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 PTPRCAPQ14761 206 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 NAA25Q14CX7 972 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 NOMO1Q15155 1222 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 NDUFA9Q16795 377 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 EXOC3L4Q17RC7 722 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 ZNF672Q499Z4 452 aaPredicted RBP2.93□□□□□ -1.94
PMS1-215ENST00000447232 MRM1Q6IN84 353 aaKnown RBP2.93□□□□□ -1.94
PMS1-215ENST00000447232 C11orf71Q6IPW1 123 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 TEPPQ6URK8 271 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 MON1BQ7L1V2 547 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 ZDHHC22Q8N966 263 aa2.93□□□□□ -1.94
PMS1-215ENST00000447232 PPHLN1Q8NEY8 458 aaKnown RBP2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms