RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 HOXA11P31270 313 aaPredicted RBP8.19□□□□□ -1.1
PTPN3-204ENST00000446349 CSNK2A1P68400 391 aaPredicted RBP8.19□□□□□ -1.1
PTPN3-204ENST00000446349 EPGNQ6UW88 154 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 SYNPOQ8N3V7 929 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 GPR150Q8NGU9 434 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 TCEAL3Q969E4 200 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 FBXL8Q96CD0 374 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 MCHR1Q99705 422 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 SCP2D1Q9UJQ7 156 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 KCND3Q9UK17 655 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 OR5K3A6NET4 321 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 ZNF99A8MXY4 864 aaPredicted RBP8.19□□□□□ -1.1
PTPN3-204ENST00000446349 LSM1O15116 133 aaKnown RBP8.19□□□□□ -1.1
PTPN3-204ENST00000446349 CHRM1P11229 460 aaPredicted RBP8.19□□□□□ -1.1
PTPN3-204ENST00000446349 GSTT1P30711 240 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 CHRNB4P30926 498 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 HMGCS1Q01581 520 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 RTP2Q5QGT7 225 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 DCAF12Q5T6F0 453 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 HMBOX1Q6NT76 420 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 DCBLD1Q8N8Z6 715 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 OR10T2Q8NGX3 314 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 HOXB13Q92826 284 aaPredicted RBP8.19□□□□□ -1.1
PTPN3-204ENST00000446349 CDC6Q99741 560 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 B3GNT4Q9C0J1 378 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 MTHFD2LQ9H903 347 aaPredicted RBP8.19□□□□□ -1.1
PTPN3-204ENST00000446349 IL21RQ9HBE5 538 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 SRPX2O60687 465 aaPredicted RBP8.19□□□□□ -1.1
PTPN3-204ENST00000446349 CDK4P11802 303 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 RABGGTBP53611 331 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 ADAM15Q13444 863 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 OR2L8Q8NGY9 312 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 DDX1Q92499 740 aaKnown RBP8.19□□□□□ -1.1
PTPN3-204ENST00000446349 LRCH3Q96II8 777 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 TBC1D17Q9HA65 648 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 ACSS2Q9NR19 701 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 PTBP2Q9UKA9 531 aaKnown RBP8.19□□□□□ -1.1
PTPN3-204ENST00000446349 DOCK2Q92608 1830 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 H2BFMP0C1H6 154 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 RHCEP18577 417 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 TCEA1P23193 301 aaKnown RBP8.19□□□□□ -1.1
PTPN3-204ENST00000446349 AGTR2P50052 363 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 CDH11P55287 796 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 PRPS1P60891 318 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 CYBRD1Q53TN4 286 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 TMEM201Q5SNT2 666 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 TIGD4Q8IY51 512 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 OR5L1Q8NGL2 311 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 MRI1Q9BV20 369 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 ABCD2Q9UBJ2 740 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 M0QX08 132 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 GLSO94925 669 aaPredicted RBP8.19□□□□□ -1.1
PTPN3-204ENST00000446349 ZNF35P13682 527 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 DDCP20711 480 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 OTX2P32243 289 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 TIGD6Q17RP2 521 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 C5orf46Q6UWT4 87 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 RBM44Q6ZP01 1051 aaKnown RBP8.19□□□□□ -1.1
PTPN3-204ENST00000446349 AGBL5Q8NDL9 886 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 TMEM80Q96HE8 168 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 MRGPRX2Q96LB1 330 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 RHBDL2Q9NX52 303 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 UBAP1Q9NZ09 502 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 CCDC59Q9P031 241 aaKnown RBP8.19□□□□□ -1.1
PTPN3-204ENST00000446349 DLX3O60479 287 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 RFPL2O75678 378 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 DAP3P51398 398 aaKnown RBP8.19□□□□□ -1.1
PTPN3-204ENST00000446349 AFF3P51826 1226 aaKnown RBP8.19□□□□□ -1.1
PTPN3-204ENST00000446349 ULK3Q6PHR2 472 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 SHFQ7M4L6 423 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 EDAQ92838 391 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 CRB3Q9BUF7 120 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 ZDHHC5Q9C0B5 715 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 OR51B5Q9H339 312 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 FN3KQ9H479 309 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 POT1Q9NUX5 634 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 POMPQ9Y244 141 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 KCNIP3Q9Y2W7 256 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 BLOC1S5-TXNDC5H3BN57 136 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 OR2T1O43869 369 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 IFI30P13284 250 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 OR12D2P58182 307 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 CSTF1Q05048 431 aaKnown RBP8.19□□□□□ -1.1
PTPN3-204ENST00000446349 LINGO2Q7L985 606 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 ARHGAP22Q7Z5H3 698 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 AQP11Q8NBQ7 271 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 MAP3K3Q99759 626 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 RDH14Q9HBH5 336 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 ANKMY1Q9P2S6 941 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 TIAM2Q8IVF5 1701 aa8.18□□□□□ -1.1
PTPN3-204ENST00000446349 A0A1B0GTW7 788 aa8.18□□□□□ -1.1
PTPN3-204ENST00000446349 SH3D21A4FU49 640 aa8.18□□□□□ -1.1
PTPN3-204ENST00000446349 CCRL2O00421 344 aa8.18□□□□□ -1.1
PTPN3-204ENST00000446349 SHOX2O60902 331 aaPredicted RBP8.18□□□□□ -1.1
PTPN3-204ENST00000446349 ARG2P78540 354 aa8.18□□□□□ -1.1
PTPN3-204ENST00000446349 PDZD3Q86UT5 571 aa8.18□□□□□ -1.1
PTPN3-204ENST00000446349 TMEM174Q8WUU8 243 aa8.18□□□□□ -1.1
PTPN3-204ENST00000446349 IER2Q9BTL4 223 aa8.18□□□□□ -1.1
PTPN3-204ENST00000446349 SLC22A31A6NKX4 558 aa8.18□□□□□ -1.1
PTPN3-204ENST00000446349 SOCS7O14512 581 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms